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The map label for this gene is ydiS [C]

Identifier: 146282946

GI number: 146282946

Start: 2827170

End: 2828825

Strand: Direct

Name: ydiS [C]

Synonym: PST_2607

Alternate gene names: 146282946

Gene position: 2827170-2828825 (Clockwise)

Preceding gene: 146282942

Following gene: 146282951

Centisome position: 61.9

GC content: 61.29

Gene sequence:

>1656_bases
ATGGAACGCGAATACATGGAATTCGACGTTGTCATCGTCGGCGCCGGCCCTGCAGGCCTATCCGCAGCCTGCCGCCTGAA
GCAAAAAGCCGCCGACGCTGGTCAGGAAATCAGTGTATGCGTCGTCGAGAAAGGCTCCGAAGTAGGTGCCCATATCCTGT
CCGGCGCGGTCTTCGAACCTCGCGCGCTGAACGAACTGTTCCCCGACTGGAAAGAACTCGGCGCCCCGCTCAACACGCCG
GTCAAGCGTGACGACATCTATCTGCTGAAGACCGCCGAAGCGGCCAGCAAGCTGCCCAATGCGCTGGTCCCCAAGACCAT
GCACAACGAAGGCAATTACATCATCTCCCTGGGCAACCTGTGCCGCTGGCTGGCCCAGCAGGCCGAGAACCTGGGTGTCG
AGATCTACCCGGGCTTCGCCGCCCAGGAAGCGCTGATCGACGAAAACGGCATCGTGCGCGGTATCGTCACCGGTGACCTG
GGCGTCGATCGCGAAGGCAACCCGAAAGAAGGCATGTACACCCCAGGCATGGAGCTGCGTGCCAAGTACACGCTGTTCGC
CGAAGGCTGCCGCGGACATATCGGCAAGCAGCTGATCAACCGCTTCCAGCTCAACGCCAATGTCGACCCGCAGCACTATG
CCATTGGCATCAAGGAACTGTGGGACATCGACCCCGCCAAGCACGAGCAAGGTCTGGTCGTGCACACCGCGGGCTGGCCG
CTGAACGACGAGAACACTGGCGGCTCGTTCCTCTATCACCTGGAAAACAATCAGGTCGTGGTCGGCCTGATCGTCGATCT
GTCCTACAGCAACCCGCACCTGTCGCCGTTCGACGAGTTCCAGCGCTACAAGCACCACCCGGTGATCAAGCAGTACCTGG
AGGGCGGCAAACGCGTTTCTTACGGCGCCCGCGCCATCGCCAAAGGTGGCCTGAACTGCCTGCCGAAGATGGTCTTCAAC
GGCGGCGCACTGATCGGCTGCGACGCCGGTACCCTGAACTTCGCCAAGATCAAGGGCAGCCACACCGCGATGAAGTCCGG
CATGCTGGCCGCCGAAGCTGCGGCGGACGCGCTGCTGGCCGGTCGCGAAGGTGGTGACGAGCTGAGCGCCTACGAAGAAG
GCTTCAAGAACAGCTGGCTGTACGACGAGCTGTACAAGAGCCGCAACTTCGGCGCTGCCATTCACAAATGGGGCGCAATC
AAGGGTGGCGCGTTCAACTTCATCGACCAGAACATCTTCGGCGGCAAGATTCCCTTCACGCTGCACGACACAAAGCCGGA
CTACGCGTGCCTCAAGCCGGCCGCCGAGTCGAAGAAGATCGAGTATCCGAAGCCGGACGGCAAACTGAGCTTCGACAAGC
TCAGCTCGGTGTTCCTCTCCAACACCAACCATGAGGAAGACCAGCCGGTTCACCTCAAGCTGACCGACCCAAGCATCCCG
ATCGACAAGAACCTGCCGCTGTACGACGAGCCGGCTCAGCGCTACTGCCCGGCAGGCGTCTACGAAGTGGTCAGCAACGA
CGATGGCAGCAAGCGCTTCCAGATCAACGCACAGAACTGCGTGCACTGCAAGACCTGCGACATCAAGGACCCGGCCCAGA
ACATCACCTGGGTCGCGCCGGAAGGTACCGGTGGGCCGAACTACCCCAACATGTAA

Upstream 100 bases:

>100_bases
CGAGCGTCTATATATAATGCGCCGGCCCGGCTCGGTCAGGGGCCGATCACAGCCCTCCACCACTTATATAACAACCAAGC
CCTGAGTAGGAGAAAGCCTA

Downstream 100 bases:

>100_bases
GCAACGAAAAAGGCTCCCTCGGGAGCCTTTTTTATGCCGTTGAAACCGGTATACCGCGACGCTACTCGGTACGTCCTATG
GGAAAAAACACACCGCCGCT

Product: electron transfer flavoprotein-ubiquinone oxidoreductase

Products: NA

Alternate protein names: ETF-QO; ETF-ubiquinone oxidoreductase; Electron-transferring-flavoprotein dehydrogenase; ETF dehydrogenase [H]

Number of amino acids: Translated: 551; Mature: 551

Protein sequence:

>551_residues
MEREYMEFDVVIVGAGPAGLSAACRLKQKAADAGQEISVCVVEKGSEVGAHILSGAVFEPRALNELFPDWKELGAPLNTP
VKRDDIYLLKTAEAASKLPNALVPKTMHNEGNYIISLGNLCRWLAQQAENLGVEIYPGFAAQEALIDENGIVRGIVTGDL
GVDREGNPKEGMYTPGMELRAKYTLFAEGCRGHIGKQLINRFQLNANVDPQHYAIGIKELWDIDPAKHEQGLVVHTAGWP
LNDENTGGSFLYHLENNQVVVGLIVDLSYSNPHLSPFDEFQRYKHHPVIKQYLEGGKRVSYGARAIAKGGLNCLPKMVFN
GGALIGCDAGTLNFAKIKGSHTAMKSGMLAAEAAADALLAGREGGDELSAYEEGFKNSWLYDELYKSRNFGAAIHKWGAI
KGGAFNFIDQNIFGGKIPFTLHDTKPDYACLKPAAESKKIEYPKPDGKLSFDKLSSVFLSNTNHEEDQPVHLKLTDPSIP
IDKNLPLYDEPAQRYCPAGVYEVVSNDDGSKRFQINAQNCVHCKTCDIKDPAQNITWVAPEGTGGPNYPNM

Sequences:

>Translated_551_residues
MEREYMEFDVVIVGAGPAGLSAACRLKQKAADAGQEISVCVVEKGSEVGAHILSGAVFEPRALNELFPDWKELGAPLNTP
VKRDDIYLLKTAEAASKLPNALVPKTMHNEGNYIISLGNLCRWLAQQAENLGVEIYPGFAAQEALIDENGIVRGIVTGDL
GVDREGNPKEGMYTPGMELRAKYTLFAEGCRGHIGKQLINRFQLNANVDPQHYAIGIKELWDIDPAKHEQGLVVHTAGWP
LNDENTGGSFLYHLENNQVVVGLIVDLSYSNPHLSPFDEFQRYKHHPVIKQYLEGGKRVSYGARAIAKGGLNCLPKMVFN
GGALIGCDAGTLNFAKIKGSHTAMKSGMLAAEAAADALLAGREGGDELSAYEEGFKNSWLYDELYKSRNFGAAIHKWGAI
KGGAFNFIDQNIFGGKIPFTLHDTKPDYACLKPAAESKKIEYPKPDGKLSFDKLSSVFLSNTNHEEDQPVHLKLTDPSIP
IDKNLPLYDEPAQRYCPAGVYEVVSNDDGSKRFQINAQNCVHCKTCDIKDPAQNITWVAPEGTGGPNYPNM
>Mature_551_residues
MEREYMEFDVVIVGAGPAGLSAACRLKQKAADAGQEISVCVVEKGSEVGAHILSGAVFEPRALNELFPDWKELGAPLNTP
VKRDDIYLLKTAEAASKLPNALVPKTMHNEGNYIISLGNLCRWLAQQAENLGVEIYPGFAAQEALIDENGIVRGIVTGDL
GVDREGNPKEGMYTPGMELRAKYTLFAEGCRGHIGKQLINRFQLNANVDPQHYAIGIKELWDIDPAKHEQGLVVHTAGWP
LNDENTGGSFLYHLENNQVVVGLIVDLSYSNPHLSPFDEFQRYKHHPVIKQYLEGGKRVSYGARAIAKGGLNCLPKMVFN
GGALIGCDAGTLNFAKIKGSHTAMKSGMLAAEAAADALLAGREGGDELSAYEEGFKNSWLYDELYKSRNFGAAIHKWGAI
KGGAFNFIDQNIFGGKIPFTLHDTKPDYACLKPAAESKKIEYPKPDGKLSFDKLSSVFLSNTNHEEDQPVHLKLTDPSIP
IDKNLPLYDEPAQRYCPAGVYEVVSNDDGSKRFQINAQNCVHCKTCDIKDPAQNITWVAPEGTGGPNYPNM

Specific function: Accepts electrons from ETF and reduces ubiquinone [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI119703746, Length=560, Percent_Identity=54.8214285714286, Blast_Score=601, Evalue=1e-172,
Organism=Escherichia coli, GI1787991, Length=333, Percent_Identity=28.2282282282282, Blast_Score=113, Evalue=3e-26,
Organism=Escherichia coli, GI1786227, Length=332, Percent_Identity=27.1084337349398, Blast_Score=99, Evalue=7e-22,
Organism=Escherichia coli, GI87082155, Length=385, Percent_Identity=27.012987012987, Blast_Score=98, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI25144720, Length=560, Percent_Identity=50.5357142857143, Blast_Score=558, Evalue=1e-159,
Organism=Saccharomyces cerevisiae, GI6324932, Length=576, Percent_Identity=43.4027777777778, Blast_Score=461, Evalue=1e-130,
Organism=Drosophila melanogaster, GI24652256, Length=557, Percent_Identity=54.9371633752244, Blast_Score=594, Evalue=1e-170,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR007859
- InterPro:   IPR003042 [H]

Pfam domain/function: PF05187 ETF_QO [H]

EC number: =1.5.5.1 [H]

Molecular weight: Translated: 60221; Mature: 60221

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEREYMEFDVVIVGAGPAGLSAACRLKQKAADAGQEISVCVVEKGSEVGAHILSGAVFEP
CCCCEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHCCCCCCC
RALNELFPDWKELGAPLNTPVKRDDIYLLKTAEAASKLPNALVPKTMHNEGNYIISLGNL
HHHHHHCCCHHHHCCCCCCCCCCCCEEEEEEHHHHHHCCCHHCCCEECCCCCEEEEHHHH
CRWLAQQAENLGVEIYPGFAAQEALIDENGIVRGIVTGDLGVDREGNPKEGMYTPGMELR
HHHHHHHHHHCCEEEECCCHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHE
AKYTLFAEGCRGHIGKQLINRFQLNANVDPQHYAIGIKELWDIDPAKHEQGLVVHTAGWP
EEEEEEECCHHHHHHHHHHHHEECCCCCCCHHEEECHHHHHCCCCCCCCCCEEEEECCCC
LNDENTGGSFLYHLENNQVVVGLIVDLSYSNPHLSPFDEFQRYKHHPVIKQYLEGGKRVS
CCCCCCCCEEEEEECCCCEEEEEEEEEECCCCCCCCHHHHHHHCCCHHHHHHHCCCCEEC
YGARAIAKGGLNCLPKMVFNGGALIGCDAGTLNFAKIKGSHTAMKSGMLAAEAAADALLA
CCHHHHHHCCHHHHHHHHHCCCEEEEECCCCEEEEEECCCHHHHHCCCHHHHHHHHHHHH
GREGGDELSAYEEGFKNSWLYDELYKSRNFGAAIHKWGAIKGGAFNFIDQNIFGGKIPFT
CCCCCCHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHCCCCCCCEEHHHCCCCCCCCCCEE
LHDTKPDYACLKPAAESKKIEYPKPDGKLSFDKLSSVFLSNTNHEEDQPVHLKLTDPSIP
EECCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCC
IDKNLPLYDEPAQRYCPAGVYEVVSNDDGSKRFQINAQNCVHCKTCDIKDPAQNITWVAP
CCCCCCCCCCCHHHHCCCCHHHHHCCCCCCEEEEEECCCEEEEEECCCCCCCCCCEEECC
EGTGGPNYPNM
CCCCCCCCCCC
>Mature Secondary Structure
MEREYMEFDVVIVGAGPAGLSAACRLKQKAADAGQEISVCVVEKGSEVGAHILSGAVFEP
CCCCEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHCCCCCCC
RALNELFPDWKELGAPLNTPVKRDDIYLLKTAEAASKLPNALVPKTMHNEGNYIISLGNL
HHHHHHCCCHHHHCCCCCCCCCCCCEEEEEEHHHHHHCCCHHCCCEECCCCCEEEEHHHH
CRWLAQQAENLGVEIYPGFAAQEALIDENGIVRGIVTGDLGVDREGNPKEGMYTPGMELR
HHHHHHHHHHCCEEEECCCHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHE
AKYTLFAEGCRGHIGKQLINRFQLNANVDPQHYAIGIKELWDIDPAKHEQGLVVHTAGWP
EEEEEEECCHHHHHHHHHHHHEECCCCCCCHHEEECHHHHHCCCCCCCCCCEEEEECCCC
LNDENTGGSFLYHLENNQVVVGLIVDLSYSNPHLSPFDEFQRYKHHPVIKQYLEGGKRVS
CCCCCCCCEEEEEECCCCEEEEEEEEEECCCCCCCCHHHHHHHCCCHHHHHHHCCCCEEC
YGARAIAKGGLNCLPKMVFNGGALIGCDAGTLNFAKIKGSHTAMKSGMLAAEAAADALLA
CCHHHHHHCCHHHHHHHHHCCCEEEEECCCCEEEEEECCCHHHHHCCCHHHHHHHHHHHH
GREGGDELSAYEEGFKNSWLYDELYKSRNFGAAIHKWGAIKGGAFNFIDQNIFGGKIPFT
CCCCCCHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHCCCCCCCEEHHHCCCCCCCCCCEE
LHDTKPDYACLKPAAESKKIEYPKPDGKLSFDKLSSVFLSNTNHEEDQPVHLKLTDPSIP
EECCCCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCC
IDKNLPLYDEPAQRYCPAGVYEVVSNDDGSKRFQINAQNCVHCKTCDIKDPAQNITWVAP
CCCCCCCCCCCHHHHCCCCHHHHHCCCCCCEEEEEECCCEEEEEECCCCCCCCCCEEECC
EGTGGPNYPNM
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]