| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is htpX [H]
Identifier: 146282878
GI number: 146282878
Start: 2766032
End: 2766904
Strand: Direct
Name: htpX [H]
Synonym: PST_2539
Alternate gene names: 146282878
Gene position: 2766032-2766904 (Clockwise)
Preceding gene: 146282877
Following gene: 146282879
Centisome position: 60.56
GC content: 62.2
Gene sequence:
>873_bases ATGATGCGCATTTTCTTGTTCCTGGCCACCAACCTTGCGGTCCTGGTCATCGCCAGCATCACCCTGAAGCTGCTCGGGGT CGATCGCTACACCGGCCAGAACTATGGCAGCCTGCTGGTCTTCTGTGCGGTGTTCGGCTTTGCGGGATCGCTGATTTCGC TGTTCATCTCCAAATGGATGGCGAAGATGAGCACACGCACGGAGATCATCAGCCAGCCGCGCACCCGCCATGAGCAGTGG CTGCTGCAGACCGTCGAGCAACTGTCGCGCGAAGCCGGCATCAAGATGCCCGAGGTCGGTATCTTCCCGGCCTACGAGGC CAACGCCTTCGCCACCGGATGGAATCGCAACGACGCGCTGGTAGCCGTCAGCCAGGGCCTGCTCGAACGTTTCTCCCCGG ATGAAGTGCGCGCGGTGCTGGCGCATGAAATCGGCCACGTGGCCAATGGCGACATGGTCACCCTGGCGCTGATCCAGGGC GTTGTGAACACCTTCGTCATGTTCTTTGCACGAATCTTCGGCAACTTCGTCGACAAGGCGATCCTCAAGAACGAGGACGG CCATGGCATCGGCTACTTCGTCGCGACGATCTTCGCCGAACTGGTACTGGGCATCCTTGCCAGCATCATCGTCATGTGGT TCTCGCGCAAGCGTGAATACCGCGCCGACGAAGCCGGCGCGCAACTGGCCGGCACCAGCGCCATGATCGGCGCCCTGCAG CGCCTGCGGGCCGAACAGGGCCTGCCGGTGCACATGCCCGATTCGCTCAAGGCGTTCGGCATCAACGGCTCGCTCAAGCA CGGCATGGCCGGCCTGTTCATGACCCATCCCTCTCTGGAGGATCGCATCGAAGCCCTGCGTCAGCGTGGCTGA
Upstream 100 bases:
>100_bases CAAGCGACATAGCTTGAAATAGTCGCTCGGTTGAATAGCTCAAGGGCGCACCTTATATAGCCTATCGTTCTTCAAATCCT ACCCTGGAGTCTGCCGCAAC
Downstream 100 bases:
>100_bases GATCGACCGAGTGGTACCGGGGCGACGCAAGTCGCCCTTTTCGTTTGTCTATGCAGATTCAACTCCGCATAGAAGGAATC GCCATGCGCCGCCTCATCTT
Product: heat shock protein HtpX
Products: NA
Alternate protein names: Heat shock protein HtpX [H]
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MMRIFLFLATNLAVLVIASITLKLLGVDRYTGQNYGSLLVFCAVFGFAGSLISLFISKWMAKMSTRTEIISQPRTRHEQW LLQTVEQLSREAGIKMPEVGIFPAYEANAFATGWNRNDALVAVSQGLLERFSPDEVRAVLAHEIGHVANGDMVTLALIQG VVNTFVMFFARIFGNFVDKAILKNEDGHGIGYFVATIFAELVLGILASIIVMWFSRKREYRADEAGAQLAGTSAMIGALQ RLRAEQGLPVHMPDSLKAFGINGSLKHGMAGLFMTHPSLEDRIEALRQRG
Sequences:
>Translated_290_residues MMRIFLFLATNLAVLVIASITLKLLGVDRYTGQNYGSLLVFCAVFGFAGSLISLFISKWMAKMSTRTEIISQPRTRHEQW LLQTVEQLSREAGIKMPEVGIFPAYEANAFATGWNRNDALVAVSQGLLERFSPDEVRAVLAHEIGHVANGDMVTLALIQG VVNTFVMFFARIFGNFVDKAILKNEDGHGIGYFVATIFAELVLGILASIIVMWFSRKREYRADEAGAQLAGTSAMIGALQ RLRAEQGLPVHMPDSLKAFGINGSLKHGMAGLFMTHPSLEDRIEALRQRG >Mature_290_residues MMRIFLFLATNLAVLVIASITLKLLGVDRYTGQNYGSLLVFCAVFGFAGSLISLFISKWMAKMSTRTEIISQPRTRHEQW LLQTVEQLSREAGIKMPEVGIFPAYEANAFATGWNRNDALVAVSQGLLERFSPDEVRAVLAHEIGHVANGDMVTLALIQG VVNTFVMFFARIFGNFVDKAILKNEDGHGIGYFVATIFAELVLGILASIIVMWFSRKREYRADEAGAQLAGTSAMIGALQ RLRAEQGLPVHMPDSLKAFGINGSLKHGMAGLFMTHPSLEDRIEALRQRG
Specific function: Unknown Function. Overexpression Of A Truncated Form Of The Htpx Protein Leads To An Increase In The Degradation Of Abnormal Proteins. [C]
COG id: COG0501
COG function: function code O; Zn-dependent protease with chaperone function
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M48B family [H]
Homologues:
Organism=Escherichia coli, GI1788133, Length=293, Percent_Identity=50.8532423208191, Blast_Score=272, Evalue=2e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022919 - InterPro: IPR001915 [H]
Pfam domain/function: PF01435 Peptidase_M48 [H]
EC number: 3.4.24.-
Molecular weight: Translated: 31968; Mature: 31968
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRIFLFLATNLAVLVIASITLKLLGVDRYTGQNYGSLLVFCAVFGFAGSLISLFISKWM CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AKMSTRTEIISQPRTRHEQWLLQTVEQLSREAGIKMPEVGIFPAYEANAFATGWNRNDAL HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCHH VAVSQGLLERFSPDEVRAVLAHEIGHVANGDMVTLALIQGVVNTFVMFFARIFGNFVDKA HHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILKNEDGHGIGYFVATIFAELVLGILASIIVMWFSRKREYRADEAGAQLAGTSAMIGALQ HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCHHHHHHHHHHHHHH RLRAEQGLPVHMPDSLKAFGINGSLKHGMAGLFMTHPSLEDRIEALRQRG HHHHHCCCCEECCCCCCEECCCCCHHHCCHHHHEECCCHHHHHHHHHHCC >Mature Secondary Structure MMRIFLFLATNLAVLVIASITLKLLGVDRYTGQNYGSLLVFCAVFGFAGSLISLFISKWM CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AKMSTRTEIISQPRTRHEQWLLQTVEQLSREAGIKMPEVGIFPAYEANAFATGWNRNDAL HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCHH VAVSQGLLERFSPDEVRAVLAHEIGHVANGDMVTLALIQGVVNTFVMFFARIFGNFVDKA HHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILKNEDGHGIGYFVATIFAELVLGILASIIVMWFSRKREYRADEAGAQLAGTSAMIGALQ HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCHHHHHHHHHHHHHH RLRAEQGLPVHMPDSLKAFGINGSLKHGMAGLFMTHPSLEDRIEALRQRG HHHHHCCCCEECCCCCCEECCCCCHHHCCHHHHEECCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA