| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is aroH [H]
Identifier: 146282851
GI number: 146282851
Start: 2740878
End: 2742233
Strand: Direct
Name: aroH [H]
Synonym: PST_2510
Alternate gene names: 146282851
Gene position: 2740878-2742233 (Clockwise)
Preceding gene: 146282846
Following gene: 146282852
Centisome position: 60.01
GC content: 64.9
Gene sequence:
>1356_bases ATGACCATGAGCCACGCCTGGAGCCCCGACAGCTGGAGAAACAAGCCGATTCAGCAGCAACCCGAATATCCGGATGCCGA GCACCTCAAGCGCGTCGAGCGCACGCTCGCCGGGTTGCCGCCGTTGGTCTTCGCCGGCGAGGCGCGGGAGCTCAGGCGGC AGTTCGCCGAGGTCACGCGCGGGCGCGCGTTCCTGCTGCAGGGCGGCGACTGCGCCGAGAGCTTCGCCGAATTCTCGGCG ACCAAGATTCGCGACACCTTCAAAGTGCTGCTGCAGATGGCAATCGTCATGACCTTCGCCGCCGGCTGCCCGGTGGTGAA GGTCGGACGCATGGCCGGTCAGTTCGCCAAGCCACGCTCGGCAGGTGATGAAACCATCGACGGCGTTACGCTGCCGGCGT ACCGCGGCGACATCGTCAACGGCATCGACTTCAACGCCAAGAGCCGTGTACCCGATCCGGAGCGCCTGCTGCAGGCCTAC CACCAGTCCACTGCCAGCCTGAACCTGCTGCGCGCCTTCGCCCAGGGCGGTTTCGCCGACTTGCATCAGGTGCACCAGTG GAACCTCGATTTCATCGCCAACTCGCTGCTGGCCGAGAAGTATCACCAGCTCGGCGCGCGCATCGACGAAACACTGAAGT TCATGCGTGCCTGCGGCCTGGACGGCGCGCCGCAGCTGCGCGAAACCAGCTTCTTCACCGCCCATGAAGCACTGCTGCTC AATTACGAGCAGGCCTTCGTGCGCCAGGACAGCCTCAGCGGCGGCTGGTACGACTGTTCCGCGCACATGCTGTGGATCGG TGATCGCACCCGTCAGCTGGACGGCGCTCACGTGGAGTTCCTGCGCGGCGTCGGCAACCCCATCGGGGTGAAGGTCGGCC CCAGCATGGCTACGGATGAGCTGATTCGCCTGATCGACATCCTCAATCCGCAGAACGACCCCGGCCGCCTGAACCTGATC GTGCGCATGGGTGCCGACAAGGTGGAAGCTGGCCTGCCACGCCTGGTGCGCGCGGTGCAGAACGAGGGACGCCAGGTGTT GTGGAGTTCCGACCCGATGCATGGCAACACCATGAAGGCATCCAGCGGCTACAAGACGCGAGACTTCGAGCGCGTACTTG CCGAAGTCCGCCAGTTCTTCGACGTGCACCGCGCCGAAGGCAGTTATCCGGGGGGCATCCATATCGAGATGACCGGGCAG AACGTCACCGAGTGCATCGGTGGCTCGCGCCCGATCACCGAGGCCGGCCTCTGCGATCGCTACCACACCCATTGCGACCC GCGCCTGAACGCCGACCAGTCGCTGGAAATGGCCTTCATGATCGCCGAAACCCTGAAGCAGGTCCGACCGGACTGA
Upstream 100 bases:
>100_bases GTGCCAGCGAAGGCGCATCTTACGCAGGCCCATAGGCCATCGCTATCTCCGGGCGCCGGATGCATCAGGTAAACTCGCGC CATTCATCTTTCGATCTGGA
Downstream 100 bases:
>100_bases GCCTCTCGGCCCCTCTGCGCGGGCAGCACCGCCCGCGCGCACGAAACGAAACCCCGCCGGCCCTGTCCGCCTAAGTAGGG GCCGCGCGGGTTCAGTCCAC
Product: phospho-2-dehydro-3-deoxyheptonate aldolase, class II
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MTMSHAWSPDSWRNKPIQQQPEYPDAEHLKRVERTLAGLPPLVFAGEARELRRQFAEVTRGRAFLLQGGDCAESFAEFSA TKIRDTFKVLLQMAIVMTFAAGCPVVKVGRMAGQFAKPRSAGDETIDGVTLPAYRGDIVNGIDFNAKSRVPDPERLLQAY HQSTASLNLLRAFAQGGFADLHQVHQWNLDFIANSLLAEKYHQLGARIDETLKFMRACGLDGAPQLRETSFFTAHEALLL NYEQAFVRQDSLSGGWYDCSAHMLWIGDRTRQLDGAHVEFLRGVGNPIGVKVGPSMATDELIRLIDILNPQNDPGRLNLI VRMGADKVEAGLPRLVRAVQNEGRQVLWSSDPMHGNTMKASSGYKTRDFERVLAEVRQFFDVHRAEGSYPGGIHIEMTGQ NVTECIGGSRPITEAGLCDRYHTHCDPRLNADQSLEMAFMIAETLKQVRPD
Sequences:
>Translated_451_residues MTMSHAWSPDSWRNKPIQQQPEYPDAEHLKRVERTLAGLPPLVFAGEARELRRQFAEVTRGRAFLLQGGDCAESFAEFSA TKIRDTFKVLLQMAIVMTFAAGCPVVKVGRMAGQFAKPRSAGDETIDGVTLPAYRGDIVNGIDFNAKSRVPDPERLLQAY HQSTASLNLLRAFAQGGFADLHQVHQWNLDFIANSLLAEKYHQLGARIDETLKFMRACGLDGAPQLRETSFFTAHEALLL NYEQAFVRQDSLSGGWYDCSAHMLWIGDRTRQLDGAHVEFLRGVGNPIGVKVGPSMATDELIRLIDILNPQNDPGRLNLI VRMGADKVEAGLPRLVRAVQNEGRQVLWSSDPMHGNTMKASSGYKTRDFERVLAEVRQFFDVHRAEGSYPGGIHIEMTGQ NVTECIGGSRPITEAGLCDRYHTHCDPRLNADQSLEMAFMIAETLKQVRPD >Mature_450_residues TMSHAWSPDSWRNKPIQQQPEYPDAEHLKRVERTLAGLPPLVFAGEARELRRQFAEVTRGRAFLLQGGDCAESFAEFSAT KIRDTFKVLLQMAIVMTFAAGCPVVKVGRMAGQFAKPRSAGDETIDGVTLPAYRGDIVNGIDFNAKSRVPDPERLLQAYH QSTASLNLLRAFAQGGFADLHQVHQWNLDFIANSLLAEKYHQLGARIDETLKFMRACGLDGAPQLRETSFFTAHEALLLN YEQAFVRQDSLSGGWYDCSAHMLWIGDRTRQLDGAHVEFLRGVGNPIGVKVGPSMATDELIRLIDILNPQNDPGRLNLIV RMGADKVEAGLPRLVRAVQNEGRQVLWSSDPMHGNTMKASSGYKTRDFERVLAEVRQFFDVHRAEGSYPGGIHIEMTGQN VTECIGGSRPITEAGLCDRYHTHCDPRLNADQSLEMAFMIAETLKQVRPD
Specific function: Unknown
COG id: COG3200
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II DAHP synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002480 [H]
Pfam domain/function: PF01474 DAHP_synth_2 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 50250; Mature: 50119
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMSHAWSPDSWRNKPIQQQPEYPDAEHLKRVERTLAGLPPLVFAGEARELRRQFAEVTR CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHC GRAFLLQGGDCAESFAEFSATKIRDTFKVLLQMAIVMTFAAGCPVVKVGRMAGQFAKPRS CCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC AGDETIDGVTLPAYRGDIVNGIDFNAKSRVPDPERLLQAYHQSTASLNLLRAFAQGGFAD CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH LHQVHQWNLDFIANSLLAEKYHQLGARIDETLKFMRACGLDGAPQLRETSFFTAHEALLL HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH NYEQAFVRQDSLSGGWYDCSAHMLWIGDRTRQLDGAHVEFLRGVGNPIGVKVGPSMATDE HHHHHHHHHCCCCCCEEECCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEECCCHHHHH LIRLIDILNPQNDPGRLNLIVRMGADKVEAGLPRLVRAVQNEGRQVLWSSDPMHGNTMKA HHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEC SSGYKTRDFERVLAEVRQFFDVHRAEGSYPGGIHIEMTGQNVTECIGGSRPITEAGLCDR CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHCCCCCCCCHHHHHHH YHTHCDPRLNADQSLEMAFMIAETLKQVRPD HHCCCCCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TMSHAWSPDSWRNKPIQQQPEYPDAEHLKRVERTLAGLPPLVFAGEARELRRQFAEVTR CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHC GRAFLLQGGDCAESFAEFSATKIRDTFKVLLQMAIVMTFAAGCPVVKVGRMAGQFAKPRS CCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC AGDETIDGVTLPAYRGDIVNGIDFNAKSRVPDPERLLQAYHQSTASLNLLRAFAQGGFAD CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH LHQVHQWNLDFIANSLLAEKYHQLGARIDETLKFMRACGLDGAPQLRETSFFTAHEALLL HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH NYEQAFVRQDSLSGGWYDCSAHMLWIGDRTRQLDGAHVEFLRGVGNPIGVKVGPSMATDE HHHHHHHHHCCCCCCEEECCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEECCCHHHHH LIRLIDILNPQNDPGRLNLIVRMGADKVEAGLPRLVRAVQNEGRQVLWSSDPMHGNTMKA HHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEC SSGYKTRDFERVLAEVRQFFDVHRAEGSYPGGIHIEMTGQNVTECIGGSRPITEAGLCDR CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHCCCCCCCCHHHHHHH YHTHCDPRLNADQSLEMAFMIAETLKQVRPD HHCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12000953; 8760910 [H]