| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is ybaN [H]
Identifier: 146282810
GI number: 146282810
Start: 2695906
End: 2696325
Strand: Direct
Name: ybaN [H]
Synonym: PST_2469
Alternate gene names: 146282810
Gene position: 2695906-2696325 (Clockwise)
Preceding gene: 146282809
Following gene: 146282812
Centisome position: 59.02
GC content: 63.81
Gene sequence:
>420_bases ATGGCCCATCGCGACATTCGGCAGCACCGCAATCCGGTCATCCGCATGACATTGCTCACGGTAGGCTGGCTCGCCGTGGC GCTGGGCGTGATCGGCATCTTCCTGCCCGTGCTGCCAACCACTCCCTTCCTGCTGCTGGCCGCCGCCTGCTTTGTGCGCA GCTCGCGGCGGTTCTACGGCTGGCTGGTCGATCACCCGCATCTCGGGCCATGGTTTCGCGATTACCTCGAAGGCAACGGC ATCCCACTCAAGGGCAAGGTCTACGCCATTGCAACGATGTGGATCAGCATCAGCGTCTCCTGCTGGCTGGTCCCGTTTGT CTGGGCACGCGTCGGTATGCTGCTGAGCGCGACACTGGTGACGCTGTACATCCTCAGGCAGAAAACCCTGGCGGTCGCCA AGCAGCCCGAGCCGCGCTGA
Upstream 100 bases:
>100_bases CAGCCCTCAGGCCTTCGGCTTCTGCACCGCCCGGGTCCGGATAGCACCCGGCTGTCGTTCCCCATTCGTGGCGGTCTGCA CGGCAGCAGCGAGTAGCGCC
Downstream 100 bases:
>100_bases ACGCCCAGCCTATCTGCAGGCTGGAGCCTGTCCCGCCAGAACTCTATCAACCACCGTGATTGCGCCGGTAGACATCCGCC CCCATCGCGTCGATCTGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MAHRDIRQHRNPVIRMTLLTVGWLAVALGVIGIFLPVLPTTPFLLLAAACFVRSSRRFYGWLVDHPHLGPWFRDYLEGNG IPLKGKVYAIATMWISISVSCWLVPFVWARVGMLLSATLVTLYILRQKTLAVAKQPEPR
Sequences:
>Translated_139_residues MAHRDIRQHRNPVIRMTLLTVGWLAVALGVIGIFLPVLPTTPFLLLAAACFVRSSRRFYGWLVDHPHLGPWFRDYLEGNG IPLKGKVYAIATMWISISVSCWLVPFVWARVGMLLSATLVTLYILRQKTLAVAKQPEPR >Mature_138_residues AHRDIRQHRNPVIRMTLLTVGWLAVALGVIGIFLPVLPTTPFLLLAAACFVRSSRRFYGWLVDHPHLGPWFRDYLEGNGI PLKGKVYAIATMWISISVSCWLVPFVWARVGMLLSATLVTLYILRQKTLAVAKQPEPR
Specific function: Unknown
COG id: COG2832
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786674, Length=112, Percent_Identity=41.0714285714286, Blast_Score=89, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007401 [H]
Pfam domain/function: PF04304 DUF454 [H]
EC number: NA
Molecular weight: Translated: 15736; Mature: 15605
Theoretical pI: Translated: 11.18; Mature: 11.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHRDIRQHRNPVIRMTLLTVGWLAVALGVIGIFLPVLPTTPFLLLAAACFVRSSRRFYG CCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEE WLVDHPHLGPWFRDYLEGNGIPLKGKVYAIATMWISISVSCWLVPFVWARVGMLLSATLV EECCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLYILRQKTLAVAKQPEPR HHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AHRDIRQHRNPVIRMTLLTVGWLAVALGVIGIFLPVLPTTPFLLLAAACFVRSSRRFYG CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEE WLVDHPHLGPWFRDYLEGNGIPLKGKVYAIATMWISISVSCWLVPFVWARVGMLLSATLV EECCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLYILRQKTLAVAKQPEPR HHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]