Definition Pseudomonas stutzeri A1501, complete genome.
Accession NC_009434
Length 4,567,418

Click here to switch to the map view.

The map label for this gene is 146282736

Identifier: 146282736

GI number: 146282736

Start: 2617227

End: 2618189

Strand: Direct

Name: 146282736

Synonym: PST_2395

Alternate gene names: NA

Gene position: 2617227-2618189 (Clockwise)

Preceding gene: 146282735

Following gene: 146282737

Centisome position: 57.3

GC content: 68.02

Gene sequence:

>963_bases
ATGCAACCGCAGGCATCGGGCACCGGGCAGCCGCCCGAACAGGACAACGGTGTCCGGGTGAGCCTGTCCGAACTCATCGA
CATTCGTCACCGTGTGCGCGAGGTCCCGCTGTTCTCCACGCCACACCGGCGCAGCCCGCTGGTGGGGCTGCATCATTCCA
AGCTGCGCGGCCGCGGCGTGGATTTCGATCAGGTGCGCGTCTACCAGGCCGGCGATGACGTGCGCACCATCGACTGGCGG
GTGACCGCCCGCACCCAGGAACCGCACACCAAGCTGTTCCACGAAGAACGCGAACGGCCCATCTACATCGTCGTCGAACA
GAGCCCGCGCCTGTTCTTCGGTAGCGGCCGGCAGTTCAAATCGGTACTGGCGGCCCAGGCAGCCGCACTGATTGGCTGGG
CCGCGCTCAGCCACAACGATCGCGTCGGCGGACTGGTGTTCGGCAGCGAGCAGCAGGAGATCAAGCCGCGCCGCAGCAAG
CAGAGCCTGCTGCAGCTGCTCGATCGCATCACCCGCGCCAACCGGCAGCTGCGACCGGACAGCCCACTCGACCCGGAGGC
CTTCAGCCTGGCGCTACGCCGCGTACGCGAAGTGCTGCGGCCCGGTAGCCTGTCGGTGATCCTCTGCGACGAACGCACCC
TGAGCGACGCCGCCGAACAGCAGCTCAGTCTGCTGGCGCGCCATGTCGATCTGTTGCTGCTGCCAGTGTTCGACCCCCTC
GATCGTGCATTGCCCGCAGCCGGGCTGCTGCGCTTCAGCCAGGGCAACGCACGGCTGGAGCTCGACACCCACGACGCTAC
CCTGCGCCAACGCTACCGCGAGCTGGGCGAGGCGCGCAGCGCGCGTTGGCAGCGCCTGGCCGATCGCCTGCGGGTGCCGC
TGATGCCGCTCGATACCCAGCATGACCTGGTCGAGCAGCTGCGTGAACACCTGAGCGTTCGTCACCCGAGCGCGCGGTCA
TGA

Upstream 100 bases:

>100_bases
TGCTGCGCCATCGCCTCATCCTGTCCTTCGAGGCGGAGGCGGCCGGCATCGATCAGGATCGGGTCATCCAGCGCATCCTG
GACGTGGTCGCGGTGGCCTG

Downstream 100 bases:

>100_bases
ACCCGCTCGACCAGCTCGCTCCCCTGATCGATCCGGAGCCCATCTCCTGGTGGCCGCCGGCACCCGGCTGGTGGCTGCTT
GGGCTGGCGTTGCTGCTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MQPQASGTGQPPEQDNGVRVSLSELIDIRHRVREVPLFSTPHRRSPLVGLHHSKLRGRGVDFDQVRVYQAGDDVRTIDWR
VTARTQEPHTKLFHEERERPIYIVVEQSPRLFFGSGRQFKSVLAAQAAALIGWAALSHNDRVGGLVFGSEQQEIKPRRSK
QSLLQLLDRITRANRQLRPDSPLDPEAFSLALRRVREVLRPGSLSVILCDERTLSDAAEQQLSLLARHVDLLLLPVFDPL
DRALPAAGLLRFSQGNARLELDTHDATLRQRYRELGEARSARWQRLADRLRVPLMPLDTQHDLVEQLREHLSVRHPSARS

Sequences:

>Translated_320_residues
MQPQASGTGQPPEQDNGVRVSLSELIDIRHRVREVPLFSTPHRRSPLVGLHHSKLRGRGVDFDQVRVYQAGDDVRTIDWR
VTARTQEPHTKLFHEERERPIYIVVEQSPRLFFGSGRQFKSVLAAQAAALIGWAALSHNDRVGGLVFGSEQQEIKPRRSK
QSLLQLLDRITRANRQLRPDSPLDPEAFSLALRRVREVLRPGSLSVILCDERTLSDAAEQQLSLLARHVDLLLLPVFDPL
DRALPAAGLLRFSQGNARLELDTHDATLRQRYRELGEARSARWQRLADRLRVPLMPLDTQHDLVEQLREHLSVRHPSARS
>Mature_320_residues
MQPQASGTGQPPEQDNGVRVSLSELIDIRHRVREVPLFSTPHRRSPLVGLHHSKLRGRGVDFDQVRVYQAGDDVRTIDWR
VTARTQEPHTKLFHEERERPIYIVVEQSPRLFFGSGRQFKSVLAAQAAALIGWAALSHNDRVGGLVFGSEQQEIKPRRSK
QSLLQLLDRITRANRQLRPDSPLDPEAFSLALRRVREVLRPGSLSVILCDERTLSDAAEQQLSLLARHVDLLLLPVFDPL
DRALPAAGLLRFSQGNARLELDTHDATLRQRYRELGEARSARWQRLADRLRVPLMPLDTQHDLVEQLREHLSVRHPSARS

Specific function: Unknown

COG id: COG1721

COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.avium MAV169 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002881
- InterPro:   IPR002035 [H]

Pfam domain/function: PF01882 DUF58 [H]

EC number: NA

Molecular weight: Translated: 36447; Mature: 36447

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPQASGTGQPPEQDNGVRVSLSELIDIRHRVREVPLFSTPHRRSPLVGLHHSKLRGRGV
CCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCC
DFDQVRVYQAGDDVRTIDWRVTARTQEPHTKLFHEERERPIYIVVEQSPRLFFGSGRQFK
CHHHEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHCCCCEEEEEECCCCEEECCCHHHH
SVLAAQAAALIGWAALSHNDRVGGLVFGSEQQEIKPRRSKQSLLQLLDRITRANRQLRPD
HHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHCHHHHHHHHHHHHHHHHHHCCCCCCC
SPLDPEAFSLALRRVREVLRPGSLSVILCDERTLSDAAEQQLSLLARHVDLLLLPVFDPL
CCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHEEECCCCHH
DRALPAAGLLRFSQGNARLELDTHDATLRQRYRELGEARSARWQRLADRLRVPLMPLDTQ
HHHCCHHHHEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
HDLVEQLREHLSVRHPSARS
HHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MQPQASGTGQPPEQDNGVRVSLSELIDIRHRVREVPLFSTPHRRSPLVGLHHSKLRGRGV
CCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCC
DFDQVRVYQAGDDVRTIDWRVTARTQEPHTKLFHEERERPIYIVVEQSPRLFFGSGRQFK
CHHHEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHCCCCEEEEEECCCCEEECCCHHHH
SVLAAQAAALIGWAALSHNDRVGGLVFGSEQQEIKPRRSKQSLLQLLDRITRANRQLRPD
HHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHCHHHHHHHHHHHHHHHHHHCCCCCCC
SPLDPEAFSLALRRVREVLRPGSLSVILCDERTLSDAAEQQLSLLARHVDLLLLPVFDPL
CCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHEEECCCCHH
DRALPAAGLLRFSQGNARLELDTHDATLRQRYRELGEARSARWQRLADRLRVPLMPLDTQ
HHHCCHHHHEEECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
HDLVEQLREHLSVRHPSARS
HHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]