| Definition | Pseudomonas stutzeri A1501, complete genome. |
|---|---|
| Accession | NC_009434 |
| Length | 4,567,418 |
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The map label for this gene is 146282658
Identifier: 146282658
GI number: 146282658
Start: 2521013
End: 2521822
Strand: Direct
Name: 146282658
Synonym: PST_2310
Alternate gene names: NA
Gene position: 2521013-2521822 (Clockwise)
Preceding gene: 146282657
Following gene: 146282659
Centisome position: 55.2
GC content: 62.59
Gene sequence:
>810_bases ATGAGTCCTCGTATCACGCTGCTGGCCGTCGCGCTCAGCATCTGCCTGCCGCTGCAGGCGGCAACCGAAGTCATCCAGCT CAACAACCGCATGGGCGAGGAAGTGCTCCCGGTAGCCGAGTCGGTACTGGGCGGCCAGGGCCGTGTCACGGCATATGGCA ACCAGCTGATCGTCAACGCGCCGGACGCGCTGATCCGAGAGCTGCGCCAGGTGGTGGACCAACTGGATGTGGCCCCCAAG CGTCTGTTGATCAGCGTCGATACCCAGGATTCGGCTAACAGCACAGCGGGAGGGTATCGGGTAGACGGATCGGCACGCGC TGGCGACGTGGAGTTCGAAACGGGCCGCGGCGAGATCGGAGGCAGGGACCAGGTTCGCATCATTCGTCGCAGTACCAACA GCCGGGACGGTGGCATTCAGCAGATCCAGGCCAGCGAGGGCTATCCGGCACTGATTCAGGTTGGCCAGAGTGTTCCGCTG ACGACTCATGGCAGCGATGGCTATGGCCAGATCTATCAGCAAACCCAGTATCGTGATGTGCTGCGTGGCTTCTACGCCAC CGCCACGGTGCATGGCGACCGCGTGCAGATCAGCATCAGCAGCAGCCGTGACCGACTCGCTCAGGGCCGCAGTGGCGTCG TCGAAGTGCAGAATGCCGATACCCGCGTCAGTGGGCGCGTTGGCGAATGGATCACCGTGGGCGGCATCGATGAAAGCGCA AGTTCTGATCAGCGCGGCACGCTGCGTCGCTATTCCACTCAGGGCAGCCAGAACCTTTCGATGCGCCTGAAAGTGGATGT TCTCGACTGA
Upstream 100 bases:
>100_bases CCCTGTATCGTGATCCTGCTCGCGTGCGCATACGCCAGGCAGAGTTCGACAAGGCATGGGATCATGGGCAATCGGACGCA AACTTGCGGAGCTTCCTGTT
Downstream 100 bases:
>100_bases ACCACTGCTGGCGCGCGGAAAAATGTAGTGGCCTAAAAAAAACACTACAAAACCGTTGACGATGAAAAAACAGCGGCGCA TTATTGGCCCGCTCCCGCTA
Product: type II and III secretion system family protein
Products: NA
Alternate protein names: Type II And III Secretion System Family Protein; NolW Domain-Containing Protein; NolW-Like; Secretion System Protein; NolW-Like Protein; Bacterial Type II/III Secretion System Short Domain Protein; Type II And III Secretion System Protein
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MSPRITLLAVALSICLPLQAATEVIQLNNRMGEEVLPVAESVLGGQGRVTAYGNQLIVNAPDALIRELRQVVDQLDVAPK RLLISVDTQDSANSTAGGYRVDGSARAGDVEFETGRGEIGGRDQVRIIRRSTNSRDGGIQQIQASEGYPALIQVGQSVPL TTHGSDGYGQIYQQTQYRDVLRGFYATATVHGDRVQISISSSRDRLAQGRSGVVEVQNADTRVSGRVGEWITVGGIDESA SSDQRGTLRRYSTQGSQNLSMRLKVDVLD
Sequences:
>Translated_269_residues MSPRITLLAVALSICLPLQAATEVIQLNNRMGEEVLPVAESVLGGQGRVTAYGNQLIVNAPDALIRELRQVVDQLDVAPK RLLISVDTQDSANSTAGGYRVDGSARAGDVEFETGRGEIGGRDQVRIIRRSTNSRDGGIQQIQASEGYPALIQVGQSVPL TTHGSDGYGQIYQQTQYRDVLRGFYATATVHGDRVQISISSSRDRLAQGRSGVVEVQNADTRVSGRVGEWITVGGIDESA SSDQRGTLRRYSTQGSQNLSMRLKVDVLD >Mature_268_residues SPRITLLAVALSICLPLQAATEVIQLNNRMGEEVLPVAESVLGGQGRVTAYGNQLIVNAPDALIRELRQVVDQLDVAPKR LLISVDTQDSANSTAGGYRVDGSARAGDVEFETGRGEIGGRDQVRIIRRSTNSRDGGIQQIQASEGYPALIQVGQSVPLT THGSDGYGQIYQQTQYRDVLRGFYATATVHGDRVQISISSSRDRLAQGRSGVVEVQNADTRVSGRVGEWITVGGIDESAS SDQRGTLRRYSTQGSQNLSMRLKVDVLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28984; Mature: 28853
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPRITLLAVALSICLPLQAATEVIQLNNRMGEEVLPVAESVLGGQGRVTAYGNQLIVNA CCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCEEEEEC PDALIRELRQVVDQLDVAPKRLLISVDTQDSANSTAGGYRVDGSARAGDVEFETGRGEIG CHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEECCCCCCCCEEEECCCCCCC GRDQVRIIRRSTNSRDGGIQQIQASEGYPALIQVGQSVPLTTHGSDGYGQIYQQTQYRDV CCCEEEEEEECCCCCCCCCEEEECCCCCHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHH LRGFYATATVHGDRVQISISSSRDRLAQGRSGVVEVQNADTRVSGRVGEWITVGGIDESA HHHHHHEEEEECCEEEEEECCCHHHHHCCCCCEEEEECCCCEECCCCCCEEEECCCCCCC SSDQRGTLRRYSTQGSQNLSMRLKVDVLD CCCCCCHHHHHCCCCCCCEEEEEEEEECC >Mature Secondary Structure SPRITLLAVALSICLPLQAATEVIQLNNRMGEEVLPVAESVLGGQGRVTAYGNQLIVNA CCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCEEEEEC PDALIRELRQVVDQLDVAPKRLLISVDTQDSANSTAGGYRVDGSARAGDVEFETGRGEIG CHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEECCCCCCCCEEEECCCCCCC GRDQVRIIRRSTNSRDGGIQQIQASEGYPALIQVGQSVPLTTHGSDGYGQIYQQTQYRDV CCCEEEEEEECCCCCCCCCEEEECCCCCHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHH LRGFYATATVHGDRVQISISSSRDRLAQGRSGVVEVQNADTRVSGRVGEWITVGGIDESA HHHHHHEEEEECCEEEEEECCCHHHHHCCCCCEEEEECCCCEECCCCCCEEEECCCCCCC SSDQRGTLRRYSTQGSQNLSMRLKVDVLD CCCCCCHHHHHCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA