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The map label for this gene is ycaP [H]

Identifier: 146282564

GI number: 146282564

Start: 2417027

End: 2417719

Strand: Direct

Name: ycaP [H]

Synonym: PST_2216

Alternate gene names: 146282564

Gene position: 2417027-2417719 (Clockwise)

Preceding gene: 146282563

Following gene: 146282565

Centisome position: 52.92

GC content: 62.63

Gene sequence:

>693_bases
ATGACCCCCTTTGATCTGCAGCGCATGCTTCTGCATGAGTTTCCGCTGATGTTCGTTGCGGAAGTGGCGCTACGGGCGCT
GCTTGCCTTTATCGCGGTATTCGTCTTCCTCAAGGTGAGCGGACGCCGAGGCATACGGCAGCTGTCGGTGTTCGAGCTGG
TGATCATCCTGACCCTCGGCTCGGCGGCGGGAGACGTCTCCTTTTACGACGATGTTCCGCTGCTGCCGGTTGCGGCCGTA
TTCGCCACGCTGCTGGCGCTGTACCGCCTGACCGTGTTTCTGATGAGCCGCAGCCCGCGGTTCGGTGTGTGGCTGGAAGG
AAAACCCGTCACCATCATTCGCGACGGAATCTACGAACTGCGCAGCCTCGACAGCATGAACATCTCGGCGGACGAGTTCT
TCATGGAGCTGCGCCAGCAGGGCGTGGAGCATCTCGGCCAGGTCAGACTCGGCATACTGGAAAACGACGGCAACGTGAGC
CTGTTCTTTCATGAGCCGGAAGCGGTACGCCCCGGGCTCTCGGTTTTACCGCCCGAGTACCGGCCGGTCTTCCGGCAGAT
CCCGGCATCGGGCATGTATGCCTGCAACCGCTGCGGCTTTCCGCAGGCGCTGGAAAGCCAGCAAGCGCTGCGATGCCCGC
GGTGCTCCAATCCGACCTGGTCGAAGGCGCTTTCCACCCGCCGCTCGCGCTGA

Upstream 100 bases:

>100_bases
GGAGTGACTGCGGCCTGCATTCGTCGACGCTGACGTTTCAGAATAGGTCGAATGCTATGCCTGCCGGCCATGCGCCGGCT
TCTCGGAAGGACGATCCCAG

Downstream 100 bases:

>100_bases
TGCACGGTACGAACCGCCAGTGCTCCTGCCGGTCAGTTGATAGAGGCGGTTCGCGTCCATGCGCGACGCCGGCTACCTTC
CCGATCAACAGCAGGAGCAG

Product: putative inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MTPFDLQRMLLHEFPLMFVAEVALRALLAFIAVFVFLKVSGRRGIRQLSVFELVIILTLGSAAGDVSFYDDVPLLPVAAV
FATLLALYRLTVFLMSRSPRFGVWLEGKPVTIIRDGIYELRSLDSMNISADEFFMELRQQGVEHLGQVRLGILENDGNVS
LFFHEPEAVRPGLSVLPPEYRPVFRQIPASGMYACNRCGFPQALESQQALRCPRCSNPTWSKALSTRRSR

Sequences:

>Translated_230_residues
MTPFDLQRMLLHEFPLMFVAEVALRALLAFIAVFVFLKVSGRRGIRQLSVFELVIILTLGSAAGDVSFYDDVPLLPVAAV
FATLLALYRLTVFLMSRSPRFGVWLEGKPVTIIRDGIYELRSLDSMNISADEFFMELRQQGVEHLGQVRLGILENDGNVS
LFFHEPEAVRPGLSVLPPEYRPVFRQIPASGMYACNRCGFPQALESQQALRCPRCSNPTWSKALSTRRSR
>Mature_229_residues
TPFDLQRMLLHEFPLMFVAEVALRALLAFIAVFVFLKVSGRRGIRQLSVFELVIILTLGSAAGDVSFYDDVPLLPVAAVF
ATLLALYRLTVFLMSRSPRFGVWLEGKPVTIIRDGIYELRSLDSMNISADEFFMELRQQGVEHLGQVRLGILENDGNVSL
FFHEPEAVRPGLSVLPPEYRPVFRQIPASGMYACNRCGFPQALESQQALRCPRCSNPTWSKALSTRRSR

Specific function: Unknown

COG id: COG2323

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0702 family [H]

Homologues:

Organism=Escherichia coli, GI1787135, Length=228, Percent_Identity=51.7543859649123, Blast_Score=246, Evalue=8e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007353
- InterPro:   IPR023090 [H]

Pfam domain/function: PF04239 DUF421 [H]

EC number: NA

Molecular weight: Translated: 25897; Mature: 25766

Theoretical pI: Translated: 8.64; Mature: 8.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPFDLQRMLLHEFPLMFVAEVALRALLAFIAVFVFLKVSGRRGIRQLSVFELVIILTLG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
SAAGDVSFYDDVPLLPVAAVFATLLALYRLTVFLMSRSPRFGVWLEGKPVTIIRDGIYEL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEHHHHHHH
RSLDSMNISADEFFMELRQQGVEHLGQVRLGILENDGNVSLFFHEPEAVRPGLSVLPPEY
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEECCHHHCCCCCCCCCCH
RPVFRQIPASGMYACNRCGFPQALESQQALRCPRCSNPTWSKALSTRRSR
HHHHHHCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
TPFDLQRMLLHEFPLMFVAEVALRALLAFIAVFVFLKVSGRRGIRQLSVFELVIILTLG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
SAAGDVSFYDDVPLLPVAAVFATLLALYRLTVFLMSRSPRFGVWLEGKPVTIIRDGIYEL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEHHHHHHH
RSLDSMNISADEFFMELRQQGVEHLGQVRLGILENDGNVSLFFHEPEAVRPGLSVLPPEY
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEECCHHHCCCCCCCCCCH
RPVFRQIPASGMYACNRCGFPQALESQQALRCPRCSNPTWSKALSTRRSR
HHHHHHCCCCCCHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]