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The map label for this gene is ybiT [H]

Identifier: 146282559

GI number: 146282559

Start: 2411415

End: 2413055

Strand: Direct

Name: ybiT [H]

Synonym: PST_2209

Alternate gene names: 146282559

Gene position: 2411415-2413055 (Clockwise)

Preceding gene: 146282558

Following gene: 146282561

Centisome position: 52.8

GC content: 61.49

Gene sequence:

>1641_bases
TTGCTGCCGGATCGGCGATGCACGCCGCCACATACATTGATAGGTAAGTCCTTGATTTCCACCGCCAACATCACCATGCA
GTTCGGTGCCAAGCCGCTGTTCGAAAACGTCTCCGTCAAATTCGGCGGCGGTAACCGCTACGGTCTCATCGGCGCCAACG
GCTGCGGCAAGTCGACCTTCATGAAGATCCTCGGTGGCGAGCTGGAGCCATCGGCCGGCCAGGTGATGCTCGAGCCCAAC
GTGCGTCTGGGCAAGCTGCGCCAGGATCAGTTCGCCTATGAAGATTTCAGCGTGATCGACACGGTGATCATGGGTCACAC
CGAGCTGTGGAAGGTGAAGGCCGAGCGCGACCGCATCTACTCACTGCCGGAAATGAGCGAAGAAGACGGCATGGCTGTCG
CCGAGCTGGAGGTGCAATTCGCCGAGTTCGACGGCTACACCGCGGAATCGCGCGCCGGCGAGCTGCTGCTCGGCCTCGGC
ATCCCGCTCGATCAGCATTTCGGCCCGATGAGTGCCGTGGCGCCCGGCTGGAAGCTGCGCGTATTGCTGGCCCAGGCGCT
GTTCTCCGACCCGGAAGTGCTGCTACTGGACGAACCGACCAACCACCTGGACATCAACACCATCCGCTGGCTGGAATCGA
TTCTCACGGCGCGCAACAGCACCATGATCATCATTTCCCACGACCGCCACTTCCTCAACAGTGTCTGCACCCACATGGCC
GACCTGGATTATGGCGAGCTGCGGCTGTTCCCGGGCAACTACGACGAATACATGACCGCCGCGACCCAGGCCCGTGAACG
CCTGCTGTCGGACAACGCCAAGAAGAAGGCGCAGATCGCCGAACTGCAGACCTTCGTCAGCCGCTTCTCGGCCAACGCCT
CCAAGGCCAAGCAGGCCACCAGCCGCGCCAAGCTGATCGACAAGATCCAGCTCGACGAAGTGAAGCCGTCCAGTCGCGTC
AGCCCGTTCATCCGTTTCGAGCAGTACAAGAAGCTGCATCGCCAGGCGGTCACGCTGGAGCGCGTCAGCCAGGGCTATGA
CGGCACGCCGCTGTTCCGGAACCTGAATCTGCAGGTCGAAGCCGGCGAGCGCGTGGCCATCATCGGTCCGAACGGCATCG
GCAAGACCACCCTGCTGCGCACTCTGGTCGGTGAATTGCCACCCATGTCCGGTGAAGTGAAATGGACCGAAAGTGCCGAC
GTGGGCTATTTCGCCCAGGACCACGCCGAGGACTTCGAGGACGACGTCACCCTCTTCGACTGGATGGGCCAGTGGACCCA
GGGCGGCGAACAGCTGGTACGCGGTACCCTTGGCCGCATGCTGTTCTCCAACGACGAGATCAACAAATCGGTCAAGGTCA
TTTCCGGTGGTGAACAGGGCCGCATGCTGTTCGGCAAGCTGATCCTGAAGAAGCCCAACGTGCTGGTCATGGACGAGCCG
ACCAACCACCTGGACATGGAATCCATCGAGGCGCTGAACCTGGCGCTGGAGAACTACCCAGGCACGCTGATCTTCGTCAG
CCATGACCGCGAATTCGTCAGCTCCCTGGCCACACGCATCATCGAACTGTCGGAAAACGGAGTCACCGATTTCAGCGGCA
GCTACGACGACTACCTGCGCAGCCAGGGCGTACAGGTCTGA

Upstream 100 bases:

>100_bases
CAATCCCCGCATTCGTTCTGACAGCCGGCCTCCGTCGCTGTCGTACTCCTCAACACTGCAGGATCACCAGCTCCTTCGCT
GCGAGCTGGAGCGCCGAGTA

Downstream 100 bases:

>100_bases
CCGTCGAATCAGCCCCAAAAAAAGCCCCGCACTAGCGGGGCTTTTCATTTCTTTGATGCTCTAGCCGATGGCCGTGCTCC
AGTCGATCATGCCCAGCTGC

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 546; Mature: 546

Protein sequence:

>546_residues
MLPDRRCTPPHTLIGKSLISTANITMQFGAKPLFENVSVKFGGGNRYGLIGANGCGKSTFMKILGGELEPSAGQVMLEPN
VRLGKLRQDQFAYEDFSVIDTVIMGHTELWKVKAERDRIYSLPEMSEEDGMAVAELEVQFAEFDGYTAESRAGELLLGLG
IPLDQHFGPMSAVAPGWKLRVLLAQALFSDPEVLLLDEPTNHLDINTIRWLESILTARNSTMIIISHDRHFLNSVCTHMA
DLDYGELRLFPGNYDEYMTAATQARERLLSDNAKKKAQIAELQTFVSRFSANASKAKQATSRAKLIDKIQLDEVKPSSRV
SPFIRFEQYKKLHRQAVTLERVSQGYDGTPLFRNLNLQVEAGERVAIIGPNGIGKTTLLRTLVGELPPMSGEVKWTESAD
VGYFAQDHAEDFEDDVTLFDWMGQWTQGGEQLVRGTLGRMLFSNDEINKSVKVISGGEQGRMLFGKLILKKPNVLVMDEP
TNHLDMESIEALNLALENYPGTLIFVSHDREFVSSLATRIIELSENGVTDFSGSYDDYLRSQGVQV

Sequences:

>Translated_546_residues
MLPDRRCTPPHTLIGKSLISTANITMQFGAKPLFENVSVKFGGGNRYGLIGANGCGKSTFMKILGGELEPSAGQVMLEPN
VRLGKLRQDQFAYEDFSVIDTVIMGHTELWKVKAERDRIYSLPEMSEEDGMAVAELEVQFAEFDGYTAESRAGELLLGLG
IPLDQHFGPMSAVAPGWKLRVLLAQALFSDPEVLLLDEPTNHLDINTIRWLESILTARNSTMIIISHDRHFLNSVCTHMA
DLDYGELRLFPGNYDEYMTAATQARERLLSDNAKKKAQIAELQTFVSRFSANASKAKQATSRAKLIDKIQLDEVKPSSRV
SPFIRFEQYKKLHRQAVTLERVSQGYDGTPLFRNLNLQVEAGERVAIIGPNGIGKTTLLRTLVGELPPMSGEVKWTESAD
VGYFAQDHAEDFEDDVTLFDWMGQWTQGGEQLVRGTLGRMLFSNDEINKSVKVISGGEQGRMLFGKLILKKPNVLVMDEP
TNHLDMESIEALNLALENYPGTLIFVSHDREFVSSLATRIIELSENGVTDFSGSYDDYLRSQGVQV
>Mature_546_residues
MLPDRRCTPPHTLIGKSLISTANITMQFGAKPLFENVSVKFGGGNRYGLIGANGCGKSTFMKILGGELEPSAGQVMLEPN
VRLGKLRQDQFAYEDFSVIDTVIMGHTELWKVKAERDRIYSLPEMSEEDGMAVAELEVQFAEFDGYTAESRAGELLLGLG
IPLDQHFGPMSAVAPGWKLRVLLAQALFSDPEVLLLDEPTNHLDINTIRWLESILTARNSTMIIISHDRHFLNSVCTHMA
DLDYGELRLFPGNYDEYMTAATQARERLLSDNAKKKAQIAELQTFVSRFSANASKAKQATSRAKLIDKIQLDEVKPSSRV
SPFIRFEQYKKLHRQAVTLERVSQGYDGTPLFRNLNLQVEAGERVAIIGPNGIGKTTLLRTLVGELPPMSGEVKWTESAD
VGYFAQDHAEDFEDDVTLFDWMGQWTQGGEQLVRGTLGRMLFSNDEINKSVKVISGGEQGRMLFGKLILKKPNVLVMDEP
TNHLDMESIEALNLALENYPGTLIFVSHDREFVSSLATRIIELSENGVTDFSGSYDDYLRSQGVQV

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=530, Percent_Identity=31.5094339622642, Blast_Score=275, Evalue=6e-74,
Organism=Homo sapiens, GI10947137, Length=539, Percent_Identity=29.8701298701299, Blast_Score=245, Evalue=6e-65,
Organism=Homo sapiens, GI27881506, Length=539, Percent_Identity=29.8701298701299, Blast_Score=245, Evalue=8e-65,
Organism=Homo sapiens, GI10947135, Length=543, Percent_Identity=31.1233885819521, Blast_Score=241, Evalue=9e-64,
Organism=Homo sapiens, GI69354671, Length=543, Percent_Identity=31.1233885819521, Blast_Score=241, Evalue=1e-63,
Organism=Escherichia coli, GI1787041, Length=530, Percent_Identity=73.3962264150943, Blast_Score=843, Evalue=0.0,
Organism=Escherichia coli, GI1789751, Length=527, Percent_Identity=33.3965844402277, Blast_Score=306, Evalue=3e-84,
Organism=Escherichia coli, GI1787182, Length=530, Percent_Identity=33.7735849056604, Blast_Score=267, Evalue=1e-72,
Organism=Escherichia coli, GI2367384, Length=522, Percent_Identity=29.3103448275862, Blast_Score=216, Evalue=3e-57,
Organism=Escherichia coli, GI1786975, Length=520, Percent_Identity=23.8461538461538, Blast_Score=102, Evalue=7e-23,
Organism=Escherichia coli, GI1788165, Length=195, Percent_Identity=28.7179487179487, Blast_Score=79, Evalue=9e-16,
Organism=Escherichia coli, GI1786398, Length=241, Percent_Identity=28.2157676348548, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1787758, Length=244, Percent_Identity=26.2295081967213, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI48995001, Length=537, Percent_Identity=21.6014897579143, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1787370, Length=219, Percent_Identity=26.4840182648402, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1787029, Length=233, Percent_Identity=24.4635193133047, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1786803, Length=214, Percent_Identity=26.6355140186916, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1786563, Length=197, Percent_Identity=26.3959390862944, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1789891, Length=224, Percent_Identity=23.6607142857143, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI48994943, Length=244, Percent_Identity=28.2786885245902, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1788761, Length=244, Percent_Identity=24.5901639344262, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI87082267, Length=219, Percent_Identity=26.4840182648402, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1786698, Length=191, Percent_Identity=27.2251308900524, Blast_Score=63, Evalue=5e-11,
Organism=Escherichia coli, GI1788450, Length=234, Percent_Identity=23.9316239316239, Blast_Score=63, Evalue=6e-11,
Organism=Escherichia coli, GI1787164, Length=199, Percent_Identity=25.1256281407035, Blast_Score=63, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17553372, Length=534, Percent_Identity=32.0224719101124, Blast_Score=260, Evalue=1e-69,
Organism=Caenorhabditis elegans, GI17559834, Length=541, Percent_Identity=29.5748613678373, Blast_Score=253, Evalue=3e-67,
Organism=Caenorhabditis elegans, GI17555318, Length=538, Percent_Identity=29.9256505576208, Blast_Score=248, Evalue=6e-66,
Organism=Caenorhabditis elegans, GI17558664, Length=202, Percent_Identity=29.2079207920792, Blast_Score=69, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6320874, Length=536, Percent_Identity=33.0223880597015, Blast_Score=274, Evalue=2e-74,
Organism=Saccharomyces cerevisiae, GI6321121, Length=555, Percent_Identity=30.6306306306306, Blast_Score=257, Evalue=3e-69,
Organism=Saccharomyces cerevisiae, GI6323278, Length=442, Percent_Identity=29.185520361991, Blast_Score=145, Evalue=2e-35,
Organism=Saccharomyces cerevisiae, GI6324314, Length=439, Percent_Identity=27.5626423690205, Blast_Score=139, Evalue=1e-33,
Organism=Saccharomyces cerevisiae, GI6325030, Length=397, Percent_Identity=26.7002518891688, Blast_Score=128, Evalue=2e-30,
Organism=Drosophila melanogaster, GI24666836, Length=533, Percent_Identity=31.8949343339587, Blast_Score=288, Evalue=5e-78,
Organism=Drosophila melanogaster, GI24641342, Length=540, Percent_Identity=30.1851851851852, Blast_Score=262, Evalue=5e-70,
Organism=Drosophila melanogaster, GI24642252, Length=556, Percent_Identity=30.3956834532374, Blast_Score=258, Evalue=7e-69,
Organism=Drosophila melanogaster, GI18859989, Length=556, Percent_Identity=30.3956834532374, Blast_Score=258, Evalue=7e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 60823; Mature: 60823

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPDRRCTPPHTLIGKSLISTANITMQFGAKPLFENVSVKFGGGNRYGLIGANGCGKSTF
CCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCEEEECCCCEEEEEECCCCCHHHH
MKILGGELEPSAGQVMLEPNVRLGKLRQDQFAYEDFSVIDTVIMGHTELWKVKAERDRIY
HHHHCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHEEEECCHHHEE
SLPEMSEEDGMAVAELEVQFAEFDGYTAESRAGELLLGLGIPLDQHFGPMSAVAPGWKLR
CCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEECCCHHHCCCCHHHCCCCHHHH
VLLAQALFSDPEVLLLDEPTNHLDINTIRWLESILTARNSTMIIISHDRHFLNSVCTHMA
HHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH
DLDYGELRLFPGNYDEYMTAATQARERLLSDNAKKKAQIAELQTFVSRFSANASKAKQAT
CCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
SRAKLIDKIQLDEVKPSSRVSPFIRFEQYKKLHRQAVTLERVSQGYDGTPLFRNLNLQVE
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEE
AGERVAIIGPNGIGKTTLLRTLVGELPPMSGEVKWTESADVGYFAQDHAEDFEDDVTLFD
CCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHCHHCCCHHHH
WMGQWTQGGEQLVRGTLGRMLFSNDEINKSVKVISGGEQGRMLFGKLILKKPNVLVMDEP
HHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEECC
TNHLDMESIEALNLALENYPGTLIFVSHDREFVSSLATRIIELSENGVTDFSGSYDDYLR
CCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
SQGVQV
HCCCCC
>Mature Secondary Structure
MLPDRRCTPPHTLIGKSLISTANITMQFGAKPLFENVSVKFGGGNRYGLIGANGCGKSTF
CCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCEEEECCCCEEEEEECCCCCHHHH
MKILGGELEPSAGQVMLEPNVRLGKLRQDQFAYEDFSVIDTVIMGHTELWKVKAERDRIY
HHHHCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHEEEECCHHHEE
SLPEMSEEDGMAVAELEVQFAEFDGYTAESRAGELLLGLGIPLDQHFGPMSAVAPGWKLR
CCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEECCCHHHCCCCHHHCCCCHHHH
VLLAQALFSDPEVLLLDEPTNHLDINTIRWLESILTARNSTMIIISHDRHFLNSVCTHMA
HHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH
DLDYGELRLFPGNYDEYMTAATQARERLLSDNAKKKAQIAELQTFVSRFSANASKAKQAT
CCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
SRAKLIDKIQLDEVKPSSRVSPFIRFEQYKKLHRQAVTLERVSQGYDGTPLFRNLNLQVE
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEE
AGERVAIIGPNGIGKTTLLRTLVGELPPMSGEVKWTESADVGYFAQDHAEDFEDDVTLFD
CCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHCHHCCCHHHH
WMGQWTQGGEQLVRGTLGRMLFSNDEINKSVKVISGGEQGRMLFGKLILKKPNVLVMDEP
HHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEECC
TNHLDMESIEALNLALENYPGTLIFVSHDREFVSSLATRIIELSENGVTDFSGSYDDYLR
CCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
SQGVQV
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]