| Definition | Yersinia pestis Pestoides F, complete genome. |
|---|---|
| Accession | NC_009381 |
| Length | 4,517,345 |
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The map label for this gene is rpoB
Identifier: 145600988
GI number:
Start: 4305431
End: 4309459
Strand: Reverse
Name: rpoB
Synonym: YPDSF_3745
Alternate gene names: NA
Gene position: NA
Preceding gene: 145600989
Following gene: 145600987
Centisome position: NA
GC content: NA
Gene sequence:
>4029_bases ATGGTTTACTCCTATACCGAGAAAAAACGTATTCGTAAGGATTTTGGTAAACGTCCACAAGTTTTGGACATACCTTATCT CCTTTCTATCCAACTTGACTCGTTCCAGAAATTTATCGAGCAAGATCCCGAAGGGCAGCACGGACTAGAAGCAGCATTCC GTTCTGTTTTTCCTATCCAGAGCTACAGCGGCAATTCGGAGCTGCAATACGTTAGCTACCGTCTTGGTGAGCCAGTATTC GACGTCAAAGAGTGCCAGATCCGTGGTGTGACTTATTCAGCACCGCTGCGCGTTAAACTGCGTCTGGTTATCTATGAGCG GGAAGCTCCGGAAGGTACGGTCAAAGACATCAAAGAACAAGAAGTCTACATGGGTGAAATTCCACTCATGACCGAAAATG GTACCTTTGTTATTAACGGTACTGAGAGGGTTATCGTATCTCAGTTGCACCGTAGCCCTGGTGTGTTCTTTGACAGCGAT AAGGGTAAAACCCATTCATCGGGTAAAGTGCTGTACAACGCACGTATCATCCCTTACCGCGGTTCATGGTTAGATTTCGA GTTTGATCCGAAAGACAACCTGTTTGTACGTATTGACCGTCGCCGTAAATTGCCTGCAACCATCATTCTGCGTGCATTGA ATTTCACCACTGCACAGATCTTGGATCTGTTCTTTGAGAAAGTGGTCTTTGAGATTCGTGATAACAAGCTGCAGATGGAA TTGGTTCCAGAGCGCTTGCGCGGTGAAACGGCATCCTTTGATATTGAAGCGAATGGCAAAGTTTACGTCGAGAAAGCGCG TCGTATTACTGCTCGTCATATTCGCCAGCTTGAAAAAGACGGCATTGACCGCATCGAAGTACCGGTTGAATACATTGCCG GTAAAGTTGTTGCTAAAGACTATGTTGATGCGAGCACCGGTGAACTGATCTGTGCCGCTAACATGGAGCTGTCACTGGAT CTGCTGGCTAAGTTGAGCCAAGCTGGCCACAAGCAAATTGAAACATTGTTCACCAACGATCTGGATCACGGTGCTTATAT CTCCGAGACCCTGCGTGTTGACCCAACCAGCGATCGTCTGAGCGCTTTGGTTGAGATCTATCGCATGATGCGTCCTGGCG AGCCACCAACACGTGAAGCCGCTGAAAATCTGTTTGAGAATCTGTTCTTCTCCGAAGACCGCTATGATTTATCTGCGGTT GGCCGGATGAAGTTCAACCGTTCTCTGCTGCGTGACGAGATCGAAGGTTCCGGTATCCTGAGCAAAGAAGACATCACAGA AGTGATGAAAAAGCTCATTGATATCCGTAACGGTAGAGGCGAAGTGGATGATATCGACCACTTGGGCAACCGTCGTATTC GTTCCGTTGGCGAGATGGCTGAAAACCAGTTCCGTGTAGGTCTGGTTCGTGTTGAGCGTGCAGTTAAAGAGCGTTTGTCT CTGGGCGACCTTGATACTCTGATGCCACAGGACATGATCAACGCCAAGCCTATCTCGGCTGCGGTGAAAGAGTTCTTTGG TTCCAGCCAGTTATCCCAATTTATGGACCAAAACAACCCGTTGTCTGAGATTACGCATAAGCGCCGTATCTCTGCATTGG GCCCGGGCGGTTTGACCCGTGAACGTGCTGGCTTTGAAGTTCGAGACGTACACCCGACTCACTACGGTCGCGTATGTCCA ATTGAAACGCCAGAAGGTCCAAACATCGGTTTGATCAACTCCTTGTCTGTATATGCACAGACTAACGAGTATGGTTTCCT GGAAACACCTTATCGTCGTGTACGTGATGGTGTGGTGACCGATGAAATTAACTATCTGTCTGCTATTGAAGAAGGCAACT TCGTTATCGCTCAGGCGAACTCCAACCTGGATGATGAAGGCCGCTTTTTAGAAGATTTGGTGACTTGTCGTAGCAAAGGC GAATCAAGCCTGTTTAGCCGCGAGCAAGTTGACTACATGGACGTATCTACTCAGCAAATCGTATCCGTTGGTGCTTCTCT GATTCCATTCTTGGAACACGATGACGCCAACCGTGCCTTGATGGGCGCGAACATGCAACGTCAGGCGGTTCCTACTCTGC GTGCTGATAAGCCGTTGGTGGGTACTGGTATGGAACGTGCAGTGGCGGTTGACTCAGGGGTAACCTCTGTAGCCAAACGT GGCGGTACTGTTCAGTACGTAGATGCATCCCGTATCGTTATTAAAGTTAACGAAGATGAGATGCACCCAGGCGAAGCCGG CATTGATATTTATAACCTGACCAAATACACCCGTTCTAACCAGAACACCTGTATCAACCAGATGCCGTGTGTGAATCTGG GTGAGCCAATCGAGCGCGGTGACGTGCTGGCAGATGGCCCATCGACAGACCTGGGCGAACTGGCATTGGGTCAGAACATG CGCGTAGCGTTCATGCCTTGGAACGGTTACAACTTCGAAGACTCCATCTTAGTCTCCGAGCGCGTGGTGCAAGAAGATCG CTTCACAACCATCCACATTCAGGAATTGGCATGTGTGTCACGCGACACCAAGTTAGGGCCTGAAGAGATCACTGCCGATA TCCCGAACGTGGGTGAAGCCGCGCTCTCCAAATTGGATGAATCCGGTATCGTGTATATCGGTGCTGAAGTGACTGGTGGT GACATTCTGGTTGGTAAGGTAACGCCTAAAGGTGAAACCCAACTGACGCCAGAAGAGAAACTGTTACGTGCGATCTTCGG TGAGAAAGCGTCTGATGTTAAAGACTCTTCTCTGCGTGTACCAAACGGTGTTTCTGGTACGGTTATCGACGTCCAGGTCT TTACTCGCGATGGCGTAGAAAAAGACAAACGTGCGTTGGAAATCGAAGAGATGCAACTGAAACAGGCTAAGAAAGACCTG ACTGAAGAGTTGCAGATCCTGGAAGCGGGCTTGTTTGCACGTATCCACGCGGTTCTGGTTTCTGGTGGCATCGAAGCTGA GAAGCTGAGCAAGTTACCACGTGAACGCTGGCTGGAACTGGGCCTGACCGACGAAGACAAGCAAAACCAACTGGAACAGT TGGCAGAGCAGTACGACGAAATGAAATCTGAATTCGAGAAGAAGATGGATGCCAAGCGTCGTAAAATCACCCAAGGCGAT GATCTAGCACCTGGTGTGCTGAAAATCGTCAAGGTGTATCTGGCGGTTAAACGTCAGATTCAACCGGGTGATAAAATGGC CGGTCGTCACGGTAACAAAGGTGTTATCTCTAAGATTAACCCAATCGAAGATATGCCTTACGATGAAAACGGTACGCCGG TAGACATCGTTCTGAACCCGCTGGGCGTACCATCGCGTATGAACATCGGTCAGATTTTGGAAACCCACTTAGGGATGGCA GCGAAGGGTATCGGCGAGAAAATCAACGCCATGCTCAAGAAGCAGGAAGAAGTTGCCAAACTGCGTGAGTTCATCCAGAA GGCCTACGATCTGGGCGACAACGTTTGTCAGAAAGTTGATCTGAGCACCTTTACCGATGACGAAGTACTGCGTCTGGCAG AGAACCTGAAAAAAGGTATGCCAATCGCAACGCCAGTCTTCGATGGTGCGACAGAGAAAGAAATCAAGGAACTGTTACAG CTGGGTGGCCTGCCAACGTCTGGTCAGATTACCTTGTTTGACGGCCGTACCGGTGAGCAATTTGAACGCCAGGTTACTGT CGGCTACATGTACATGCTGAAACTGAACCACTTGGTTGATGACAAGATGCATGCGCGTTCTACCGGTTCTTATAGCTTGG TTACTCAGCAGCCGCTGGGTGGTAAAGCTCAGTTCGGTGGTCAGCGCTTCGGTGAGATGGAAGTGTGGGCGTTGGAGGCT TATGGCGCCGCGTACACATTGCAAGAAATGCTTACCGTCAAGTCCGACGATGTAAACGGCCGTACCAAGATGTACAAAAA CATCGTGGATGGCGATCACCGTATGGAACCAGGAATGCCGGAGTCCTTCAACGTATTGTTGAAAGAAATCCGCTCTCTGG GCATCAATATCGAGCTGGAAGAAGAGTAA
Upstream 100 bases:
>100_bases GGAAGTGTTTCGACTTCTCGATCAAAATAATAGTGTTGCATGACCTGTCCTAGTTTAGGGCGGACAGAGTGGGTCACTGA TCAGCGAGCTGAGGAACCCT
Downstream 100 bases:
>100_bases TTCTTCACCAGACGGCAAACTCTCATAGCCGGGAGTTTGCTGGTGGTTCGCACTGGTCACAGGGGCACTCAAACCTAGGT TCTTAGGTTTGAGTGCCTAT
Product: DNA-directed RNA polymerase subunit beta
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1342_residues MVYSYTEKKRIRKDFGKRPQVLDIPYLLSIQLDSFQKFIEQDPEGQHGLEAAFRSVFPIQSYSGNSELQYVSYRLGEPVF DVKECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQEVYMGEIPLMTENGTFVINGTERVIVSQLHRSPGVFFDSD KGKTHSSGKVLYNARIIPYRGSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNFTTAQILDLFFEKVVFEIRDNKLQME LVPERLRGETASFDIEANGKVYVEKARRITARHIRQLEKDGIDRIEVPVEYIAGKVVAKDYVDASTGELICAANMELSLD LLAKLSQAGHKQIETLFTNDLDHGAYISETLRVDPTSDRLSALVEIYRMMRPGEPPTREAAENLFENLFFSEDRYDLSAV GRMKFNRSLLRDEIEGSGILSKEDITEVMKKLIDIRNGRGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS LGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTRERAGFEVRDVHPTHYGRVCP IETPEGPNIGLINSLSVYAQTNEYGFLETPYRRVRDGVVTDEINYLSAIEEGNFVIAQANSNLDDEGRFLEDLVTCRSKG ESSLFSREQVDYMDVSTQQIVSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTSVAKR GGTVQYVDASRIVIKVNEDEMHPGEAGIDIYNLTKYTRSNQNTCINQMPCVNLGEPIERGDVLADGPSTDLGELALGQNM RVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVSRDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGG DILVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDL TEELQILEAGLFARIHAVLVSGGIEAEKLSKLPRERWLELGLTDEDKQNQLEQLAEQYDEMKSEFEKKMDAKRRKITQGD DLAPGVLKIVKVYLAVKRQIQPGDKMAGRHGNKGVISKINPIEDMPYDENGTPVDIVLNPLGVPSRMNIGQILETHLGMA AKGIGEKINAMLKKQEEVAKLREFIQKAYDLGDNVCQKVDLSTFTDDEVLRLAENLKKGMPIATPVFDGATEKEIKELLQ LGGLPTSGQITLFDGRTGEQFERQVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEA YGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGDHRMEPGMPESFNVLLKEIRSLGINIELEEE
Sequences:
NA
Specific function: NA
COG id: COG0085
COG function: function code K; DNA-directed RNA polymerase, beta subunit/140 kD subunit
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA