Definition Yersinia pestis Pestoides F, complete genome.
Accession NC_009381
Length 4,517,345

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Identifier: 145599106

GI number:

Start: 2059941

End: 2063387

Strand: Direct

Name: Not Available

Synonym: YPDSF_1824

Alternate gene names: NA

Gene position: NA

Preceding gene: 145599098

Following gene: 145599136

Centisome position: NA

GC content: NA

Gene sequence:

>3447_bases
ATGTCCCAACAATATCGTTATTCATTGCCTGAACGACGTGGTGATACCCGTCAGTTAGGCCAGTTGACCGGATCAGCCTG
TGCGGTCGAATGTGCCGAAATCATTGAACGCCATGATGGCCCGGTAATGCTGATTACCCCCGATATGCAAACGGCCTTGC
GCTTGCGTGATGAGATCCAGCAATTCTCGCCACAACCCGTAAGTACCCTCTCCGATTGGGAAACGCTGCCTTACGATAGC
TTCTCGCCACATCAGGATATTATTTCGGCCCGCCTCTCTTGTTTGTATCATCTTCCGGCAATGAAACGCGGTGTCATTAT
TCTCCCAATTAATACCCTGATGCAACGAGTGTGCCCACACGAATTTCTACATGGCCACGCTTTGGTGATGAAAAAAGGCC
AGCACTTGTCACGGGATAAGTTACGCGCCCAACTTGAGCAAGCGGGCTATCGCAGTGTTGAACAGGTCATGGAGCACGGT
GAGTTTGCGACGCGAGGTGCGTTGCTGGACTTATACCCAATGGGGAGCAATGAACCGTATCGGATTGATTTTTTTGATGA
TGACATTGATAGCCTGCGGGTATTTGACGTTGATTCGCAACGCACACTCGTCGAAGTTGAGCAAATAAACTTACTGCCAG
CACATGAGTTCCCAATAGATAAAGCGGCGATTGAATTATTCCGTAGCCAATGGCGTGAACAGTTTGAAGTCCGTCGCGAC
AACGAACATATTTATCAGCAAGTGAGTAAAGGCATCTGGCCTGCGGGTATCGAGTATTGGCAGCCGCTGTTTTTCAGCCA
GCAATTACCGACATTGTTTAGCTATCTGCCTGAAAATACCTTATTGGTAAACACCGGAGATCTGGAAAGCTCGGCTGAAC
GCTTCTGGCAGGACGTTAACCAACGCTTCGAAAGCCGCCGTGTTGACCCAATGCGCCCACTGTTGGCCCCCGAGAGCTTG
TGGCTTCGGGTTGATGCGCTGTTTAATGAATTAAAAGAGTGGCCGCGTGTTCAGCTTAAAACAGAGGCGCAGCCCGCCAA
AGCCGCGAATACCAATTTATGTTATCAACCGCTGCCCGATTTATCCGTTCAGGCACAACAAAAAGCGCCTCTTGATAATC
TGCGTCGCTTTATTGAATCGTTTCATGGCAGTGTGGTGTTCTCGGTTGAAAGTGAAGGCCGCCGTGAAACCTTACAAGAC
CTGCTGGCACGGATAAAACTCAGCCCAACACTGATCACTACGCTGTCTCAGGCGGCTAACCCCGGCCATTATCTGATGGT
TGGGGCCTCGGAACGTGGCTTCCTCGATACTGACAAACAACTGGCGCTGATTTGTGAAAGCGACCTACTCGGTGAGCGTG
TCAGCCGTCGCCGGCAAGATAACCGGCGGACCATCAACACCGATACGTTGATCCGTAATTTGGCAGAACTCCGCCCCGGC
CAGCCGGTAGTCCATCTGGAACACGGTGTCGGCCGCTATCTGGGACTAACCACCCTTGAAGCGGGTGGGATAAAGGCTGA
ATACCTGATATTGACTTACGCCGGTGAAGATAAACTGTATGTCCCCGTGTCATCATTGCATCTCATTAGCCGCTATTCAG
GGGGTGCGGACGATAACGCCCCGTTGCATAGGTTAGGCAGCGATGTCTGGAGCCGGGCACGGCAAAAAGCCGCCGAGAAA
GTGCGGGATGTTGCTGCTGAACTGCTGGATATCTATGCCCAGAGGGCGGTTAAATCTGGCTTTAAATTTAAGCATGACCG
TGAGCAATACCAGCTGTTCTGCCAAAGCTTCCCGTTTGAAACCACGCCAGATCAAGAGCAGGCGATCAACGCGGTGCTCA
GTGATATGTGCCAACCGTTAGCCATGGACCGCTTGGTTTGTGGTGATGTGGGCTTTGGTAAAACGGAAGTGGCGATGCGG
GCCGCATTTCTGGCCGTTACCAATAATAAACAAGTGGCGGTGTTGGTACCCACCACCCTGCTGGCTCAACAGCATTTTGA
TAATTTCCGTGACCGCTTTGCCACTTGGCCGGTACGGATTGAGATGCTATCCCGTTTTCGCAGTGCCAAAGAGCAGCAAG
TCATTCTGGAACAAGCCGCTGAAGGCAAAATCGATATCCTTATCGGTACCCATAAATTGCTGCAAAGCGATCTGCATTGG
CACGATCTCGGCCTGCTGATTGTGGATGAAGAACACCGCTTCGGCGTGCGTCATAAAGAGCGGATCAAAGCGATGCGGGC
TGATGTTGATATCCTGACCCTGACGGCCACGCCAATCCCACGGACACTGAATATGGCGATGAGTGGCATGCGTGACTTAT
CGATTATCGCCACCCCTCCGGCACGGCGTCTGGCGGTAAAAACCTTTGTCCGCGAATACGATAGCCTGGTGATCCGTGAA
GCCATATTGCGTGAAATCCTGCGCGGTGGGCAAGTCTATTACCTGTACAACGATGTGGAGAATATCGAAAAAGTCACGCA
GAAACTGGCTGAATTAGTCCCTGAGGCTCGGATAACCATCGGCCATGGTCAAATGCGTGAACGGGATTTGGAACGGGTGA
TGAATGATTTCCACCATCAACGCTTCAATGTGCTGGTCTGTACCACCATTATTGAAACCGGTATTGATATTCCCAGCGCC
AATACCATTATTATTGAGCGAGCGGATCACTTGGGTCTAGCGCAGTTGCACCAGCTCAGAGGCCGGGTCGGGCGCTCTCA
CCATCAGGCTTATGCCTACTTGCTGACCCCCAATCCAAAAGCCATGAGCACCGATGCGAAGAAACGGCTGGAAGCCATTG
CGTCACTGGAAGATCTCGGTGCAGGTTTTGCATTGGCGACACATGATTTGGAAATCCGTGGTGCCGGGGAGCTATTGGGC
GAGGACCAAAGCGGCCAGATGACCACGATTGGCTTCTCGTTGTATATGGAGCTACTGGAAAGTGCCGTAGATGCGCTAAA
AGAGGGCCGTGAGCCTTCATTAGAAGACCTGACCAGCAACCAAACCGAAATAGAAATGCGCATGCCGGTGCTGCTGCCAG
AGGATTTCATTTCAGATGTGAATATCAGGCTGTCGTTCTATAAACGTATCGCCAGTGCGCGCAACGAAACCGAGCTGGAT
GAGTTAAAAGTTGAGCTAATCGATCGCTTTGGCAAGTTACCCGACCCCGCCCGCTATTTATTGCATACCGCCGAATTGCG
TCAACAAGCCCAGAAACTGGGTATCAAACGTATTGAAGGCAATGAGCGTGGCGGTTTCATTGAGTTTGGCGAGAACAATA
AAGTGGATCCGGTGTATTTGATTGGGCTGTTACAACGGCAACCACAGATTTACCGTTTGGAAGGGCCAACCAAATTGAAG
TTGGTGCAAGATTTAAGTGATCGGGCGCAACGGTTGAAATTTATTACGGAGTTACTGGCGGCATTTGCACAACATCGCAT
TGCCTAG

Upstream 100 bases:

>100_bases
CGTCGCTGTTGTGCTGCTACTATCATGCCAAAATTAAGCGCTGGTTAGCGACTGGTCAATCATCAGTTCAACCACATACA
AAGAGACTGTTTAACTGCTT

Downstream 100 bases:

>100_bases
CCTCGGTATGTACACATTATTTATAGGTATACACCTCAACGTGATATGCCTGAAGTTGATCAAACGAAACTAACGCGTGA
AGGGTTTCTCCACAGTGAGA

Product: transcription-repair coupling factor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1148_residues
MSQQYRYSLPERRGDTRQLGQLTGSACAVECAEIIERHDGPVMLITPDMQTALRLRDEIQQFSPQPVSTLSDWETLPYDS
FSPHQDIISARLSCLYHLPAMKRGVIILPINTLMQRVCPHEFLHGHALVMKKGQHLSRDKLRAQLEQAGYRSVEQVMEHG
EFATRGALLDLYPMGSNEPYRIDFFDDDIDSLRVFDVDSQRTLVEVEQINLLPAHEFPIDKAAIELFRSQWREQFEVRRD
NEHIYQQVSKGIWPAGIEYWQPLFFSQQLPTLFSYLPENTLLVNTGDLESSAERFWQDVNQRFESRRVDPMRPLLAPESL
WLRVDALFNELKEWPRVQLKTEAQPAKAANTNLCYQPLPDLSVQAQQKAPLDNLRRFIESFHGSVVFSVESEGRRETLQD
LLARIKLSPTLITTLSQAANPGHYLMVGASERGFLDTDKQLALICESDLLGERVSRRRQDNRRTINTDTLIRNLAELRPG
QPVVHLEHGVGRYLGLTTLEAGGIKAEYLILTYAGEDKLYVPVSSLHLISRYSGGADDNAPLHRLGSDVWSRARQKAAEK
VRDVAAELLDIYAQRAVKSGFKFKHDREQYQLFCQSFPFETTPDQEQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMR
AAFLAVTNNKQVAVLVPTTLLAQQHFDNFRDRFATWPVRIEMLSRFRSAKEQQVILEQAAEGKIDILIGTHKLLQSDLHW
HDLGLLIVDEEHRFGVRHKERIKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSLVIRE
AILREILRGGQVYYLYNDVENIEKVTQKLAELVPEARITIGHGQMRERDLERVMNDFHHQRFNVLVCTTIIETGIDIPSA
NTIIIERADHLGLAQLHQLRGRVGRSHHQAYAYLLTPNPKAMSTDAKKRLEAIASLEDLGAGFALATHDLEIRGAGELLG
EDQSGQMTTIGFSLYMELLESAVDALKEGREPSLEDLTSNQTEIEMRMPVLLPEDFISDVNIRLSFYKRIASARNETELD
ELKVELIDRFGKLPDPARYLLHTAELRQQAQKLGIKRIEGNERGGFIEFGENNKVDPVYLIGLLQRQPQIYRLEGPTKLK
LVQDLSDRAQRLKFITELLAAFAQHRIA

Sequences:
NA

Specific function: NA

COG id: COG1197

COG function: function code LK; Transcription-repair coupling factor (superfamily II helicase)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA