| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is fhuA [H]
Identifier: 145301185
GI number: 145301185
Start: 4667676
End: 4669781
Strand: Direct
Name: fhuA [H]
Synonym: ASA_4363
Alternate gene names: 145301185
Gene position: 4667676-4669781 (Clockwise)
Preceding gene: 145301169
Following gene: 145301186
Centisome position: 99.26
GC content: 59.07
Gene sequence:
>2106_bases ATGATTGCGCAAAAAAACACCCTGACCGCAGCGATGCGAAATAGAGGGGCACAGCAACTGCTGCCGCTCTCCTGCCTGCT GGCAAGCCTGCCAGTACTGGCCGAACAACCGAAAGAATTGCCAAAAGCCAGCGAAACCATGGTGGTGACAGGTACCGCCA TGAAGGTGGAAGTGCCCATGGCCGAGACGCCAAGGGCCGTCTCAGTGGTCAATCGTGAGGAACTGGATCAGCACGCCGTG CTGAAACTGGACGAAGCGCTGCGCTACCGCTCCGGTGTGCTCTCCCAATCCTATGGATCCGACAACGATGCTGACTGGTT CAAGGTGCGTGGCTTCGATGCCGCCTCCTATCTGGATGGCAATCGCCTGTTCAGCACCGGCTACTATGTGTGGACGCCAG AGCCGTTCGGTCTGGAAAGCGTGGAAGTGCTGAAAGGGCCCGCCTCGATCCTCTACGGCGAGGCGCCTCCCGGCGGCGTG ATCAATGCCATCAGCAAGCGGCCGACTGCCACCCCGCAGGGGCAGCTGGATCTGCAGATGGGCTGCCGGGATCTTCGCCA GATCGGGGTGGATGTCTCGGATGCATTGACCGACAACAGTCGCTACCGTCTGGTCGCCCTCTATAGCGAGCGTGACGGCG TGCTGAACGATACCTATAACGATAGGGTTTATCTGGCGCCAAGCGTCACCCTGGATATCTCGGATCGTACCAGCCTGACC CTGCTGGCCAGTTTCAAGCATGACGAAGGTGTGCCGACCAACGGCTTCTTCCCTGTCTATGGCACTCTCAATACCAGCGG TGGCCAGATTGATCCCTCCACCAACCTGAGCCAGCCGGATTACGATCGCAATCGCAACACCCAGATCTCCGCCGGTTACG AGCTGGCCCACCAGCTCAACCAGACCTGGGAATTCAAGCAGAACGTCCGCTTCAACTACAACGATCTGCTGCTGCGCCAG ACCTATATCTTCCCGACCTATGAAGGCACGACCGCCTACCGTGGGCTGGTCTACCGGGATGGCGACACCAAGAGCGCCAC CATGGATAACCAGATGGTGGGTTACTGGAACACGGACAGCACGGAGCAGACCTTGCTGCTGGGGCTGGATCTGCAGCGTC ACGTCAACGAAGGTCAGGAAGCCGATAACTTCGGCATGGGTTCCATCAATACCATGAACCCGGATTACAGCGGCTTCCCC GGTTTTGACGAATCCACCACCATCCACCAGAAGAGCACCAAGGGCCAGAGCGGCCTCTATGCCCAGCACCAGATCCGCTG GGACGATCGCTGGTTGCTGACCGGTGGTGGCCGCTTCGACTATGTGGAGACCCACAACATCAGCGAAGCCAAGAGCAAGG AGGAGAAACAGTACGATCACGAGCTATCCCTCTCCGGCAGCCTGATGTATCTGGCCGACAACGGTCTCTCTCCTTATATT GCCTACGCCGAATCGTTCGAGGTGTTGCCCGGGATAGATCCCAATACCCAGAACTCCTACAAGCCGCTCAAGGGCACCCT GTATGAGACTGGCGTCAAGTACGCCCCCAGCTTCCTAGACGGTTACATCAATCTGGCCCTGTTCGATCTGGAGCAGACCA ACTCGCTCGTCTCTACAGGATCCGGTCAGCAGACCCAGGCCGGCGAAGTGACCTCCCAGGGTGTCGAGCTGGAAGGCAGC GTGCAGGCCACAGAGGCGCTGCGTCTCACCGCTGCTTATACCTACACGGATGCCAAGACCAACGACACCGGCAAGGGTGA TCGCCGTGCCAGCCTGATCCCGCGCCATATCGCCTCCTTCTGGGGCAACTACAAGGTGCAGCAGGGAGTTGCTTCCGGTC TGGAACTGCGAACCGGCGTACGTTATGTCGGCTCCAGTGTCGGCATAGGCGCCGTGGATGCCAGCTACAACCCCATCTAT GGTTCGGCCCAGGTACCGGCCCATACCGTATGGGATGCGATGATCGGGTATGACTTTGCCAAGAACTGGCGAGCCCAGCT CAACGTCAACAACCTGCTGGGTGAAACCTACGTGGCCAGCTGTGACTACTACTGCTACTACGGCGAGCCGCGCAGTGTGG TGGGCAGCATCAACTACCGCTGGTAA
Upstream 100 bases:
>100_bases ATTGCGCTGCTTTATTCGCCTGAGGAACCGGGCAGACCAGCTTGATCGGTCACCAATAATAAGAAACCAGAAACAACTCA TTGATATTTGAGACACTTAT
Downstream 100 bases:
>100_bases CAGAGGTCGGGCGGGAGTCGTGACTTCCGCCCTTTTTTCCCCGCATACAGGCCCGTCATGGAACTCTTGTCTCTGGTTTA CCGCCAATATCGTTGGCCCT
Product: hydroxamate-type ferric siderophore receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 701; Mature: 701
Protein sequence:
>701_residues MIAQKNTLTAAMRNRGAQQLLPLSCLLASLPVLAEQPKELPKASETMVVTGTAMKVEVPMAETPRAVSVVNREELDQHAV LKLDEALRYRSGVLSQSYGSDNDADWFKVRGFDAASYLDGNRLFSTGYYVWTPEPFGLESVEVLKGPASILYGEAPPGGV INAISKRPTATPQGQLDLQMGCRDLRQIGVDVSDALTDNSRYRLVALYSERDGVLNDTYNDRVYLAPSVTLDISDRTSLT LLASFKHDEGVPTNGFFPVYGTLNTSGGQIDPSTNLSQPDYDRNRNTQISAGYELAHQLNQTWEFKQNVRFNYNDLLLRQ TYIFPTYEGTTAYRGLVYRDGDTKSATMDNQMVGYWNTDSTEQTLLLGLDLQRHVNEGQEADNFGMGSINTMNPDYSGFP GFDESTTIHQKSTKGQSGLYAQHQIRWDDRWLLTGGGRFDYVETHNISEAKSKEEKQYDHELSLSGSLMYLADNGLSPYI AYAESFEVLPGIDPNTQNSYKPLKGTLYETGVKYAPSFLDGYINLALFDLEQTNSLVSTGSGQQTQAGEVTSQGVELEGS VQATEALRLTAAYTYTDAKTNDTGKGDRRASLIPRHIASFWGNYKVQQGVASGLELRTGVRYVGSSVGIGAVDASYNPIY GSAQVPAHTVWDAMIGYDFAKNWRAQLNVNNLLGETYVASCDYYCYYGEPRSVVGSINYRW
Sequences:
>Translated_701_residues MIAQKNTLTAAMRNRGAQQLLPLSCLLASLPVLAEQPKELPKASETMVVTGTAMKVEVPMAETPRAVSVVNREELDQHAV LKLDEALRYRSGVLSQSYGSDNDADWFKVRGFDAASYLDGNRLFSTGYYVWTPEPFGLESVEVLKGPASILYGEAPPGGV INAISKRPTATPQGQLDLQMGCRDLRQIGVDVSDALTDNSRYRLVALYSERDGVLNDTYNDRVYLAPSVTLDISDRTSLT LLASFKHDEGVPTNGFFPVYGTLNTSGGQIDPSTNLSQPDYDRNRNTQISAGYELAHQLNQTWEFKQNVRFNYNDLLLRQ TYIFPTYEGTTAYRGLVYRDGDTKSATMDNQMVGYWNTDSTEQTLLLGLDLQRHVNEGQEADNFGMGSINTMNPDYSGFP GFDESTTIHQKSTKGQSGLYAQHQIRWDDRWLLTGGGRFDYVETHNISEAKSKEEKQYDHELSLSGSLMYLADNGLSPYI AYAESFEVLPGIDPNTQNSYKPLKGTLYETGVKYAPSFLDGYINLALFDLEQTNSLVSTGSGQQTQAGEVTSQGVELEGS VQATEALRLTAAYTYTDAKTNDTGKGDRRASLIPRHIASFWGNYKVQQGVASGLELRTGVRYVGSSVGIGAVDASYNPIY GSAQVPAHTVWDAMIGYDFAKNWRAQLNVNNLLGETYVASCDYYCYYGEPRSVVGSINYRW >Mature_701_residues MIAQKNTLTAAMRNRGAQQLLPLSCLLASLPVLAEQPKELPKASETMVVTGTAMKVEVPMAETPRAVSVVNREELDQHAV LKLDEALRYRSGVLSQSYGSDNDADWFKVRGFDAASYLDGNRLFSTGYYVWTPEPFGLESVEVLKGPASILYGEAPPGGV INAISKRPTATPQGQLDLQMGCRDLRQIGVDVSDALTDNSRYRLVALYSERDGVLNDTYNDRVYLAPSVTLDISDRTSLT LLASFKHDEGVPTNGFFPVYGTLNTSGGQIDPSTNLSQPDYDRNRNTQISAGYELAHQLNQTWEFKQNVRFNYNDLLLRQ TYIFPTYEGTTAYRGLVYRDGDTKSATMDNQMVGYWNTDSTEQTLLLGLDLQRHVNEGQEADNFGMGSINTMNPDYSGFP GFDESTTIHQKSTKGQSGLYAQHQIRWDDRWLLTGGGRFDYVETHNISEAKSKEEKQYDHELSLSGSLMYLADNGLSPYI AYAESFEVLPGIDPNTQNSYKPLKGTLYETGVKYAPSFLDGYINLALFDLEQTNSLVSTGSGQQTQAGEVTSQGVELEGS VQATEALRLTAAYTYTDAKTNDTGKGDRRASLIPRHIASFWGNYKVQQGVASGLELRTGVRYVGSSVGIGAVDASYNPIY GSAQVPAHTVWDAMIGYDFAKNWRAQLNVNNLLGETYVASCDYYCYYGEPRSVVGSINYRW
Specific function: Involved in the initial step of iron uptake by binding chrysobactin, an iron chelatin siderophore that allows the bacteria to extract iron from the environment [H]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=710, Percent_Identity=31.5492957746479, Blast_Score=308, Evalue=7e-85, Organism=Escherichia coli, GI1787024, Length=728, Percent_Identity=25.8241758241758, Blast_Score=127, Evalue=3e-30, Organism=Escherichia coli, GI1788478, Length=180, Percent_Identity=30.5555555555556, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 77551; Mature: 77551
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAQKNTLTAAMRNRGAQQLLPLSCLLASLPVLAEQPKELPKASETMVVTGTAMKVEVPM CCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHCHHHCCCCCCEEEEEECEEEEEECC AETPRAVSVVNREELDQHAVLKLDEALRYRSGVLSQSYGSDNDADWFKVRGFDAASYLDG CCCCCCEEHHCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHCCCC NRLFSTGYYVWTPEPFGLESVEVLKGPASILYGEAPPGGVINAISKRPTATPQGQLDLQM CEEEECCEEEECCCCCCCCHHHHHCCCCCEEECCCCCCHHHHHHCCCCCCCCCCCEEHHH GCRDLRQIGVDVSDALTDNSRYRLVALYSERDGVLNDTYNDRVYLAPSVTLDISDRTSLT HHHHHHHHCCCHHHHHCCCCCEEEEEEEECCCCCCCCCCCCEEEECCEEEEEECCCCCEE LLASFKHDEGVPTNGFFPVYGTLNTSGGQIDPSTNLSQPDYDRNRNTQISAGYELAHQLN EEEECCCCCCCCCCCEEEEEEEEECCCCEECCCCCCCCCCCCCCCCCEEECHHHHHHHHC QTWEFKQNVRFNYNDLLLRQTYIFPTYEGTTAYRGLVYRDGDTKSATMDNQMVGYWNTDS CCHHHHCCCCCCCCCEEEEEEEEEECCCCCCHHCEEEEECCCCCCCCCCCCEEEEECCCC TEQTLLLGLDLQRHVNEGQEADNFGMGSINTMNPDYSGFPGFDESTTIHQKSTKGQSGLY CCEEEEEECCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCE AQHQIRWDDRWLLTGGGRFDYVETHNISEAKSKEEKQYDHELSLSGSLMYLADNGLSPYI EEEEEEECCEEEEECCCEEEEEECCCCHHHHHHHHHHHCCEECCCCCEEEEECCCCCCEE AYAESFEVLPGIDPNTQNSYKPLKGTLYETGVKYAPSFLDGYINLALFDLEQTNSLVSTG EECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHCHHHHCCEEEEEEEEEHHCCCHHCCC SGQQTQAGEVTSQGVELEGSVQATEALRLTAAYTYTDAKTNDTGKGDRRASLIPRHIASF CCCCCCCCCHHHCCEEECCCCCHHHEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHH WGNYKVQQGVASGLELRTGVRYVGSSVGIGAVDASYNPIYGSAQVPAHTVWDAMIGYDFA HCCCEEHHHHHCCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH KNWRAQLNVNNLLGETYVASCDYYCYYGEPRSVVGSINYRW CCCEEEEEHHHHCCCCEEECCCEEEEECCCCCEEEECCCCC >Mature Secondary Structure MIAQKNTLTAAMRNRGAQQLLPLSCLLASLPVLAEQPKELPKASETMVVTGTAMKVEVPM CCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHCHHHCCCCCCEEEEEECEEEEEECC AETPRAVSVVNREELDQHAVLKLDEALRYRSGVLSQSYGSDNDADWFKVRGFDAASYLDG CCCCCCEEHHCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHCCCC NRLFSTGYYVWTPEPFGLESVEVLKGPASILYGEAPPGGVINAISKRPTATPQGQLDLQM CEEEECCEEEECCCCCCCCHHHHHCCCCCEEECCCCCCHHHHHHCCCCCCCCCCCEEHHH GCRDLRQIGVDVSDALTDNSRYRLVALYSERDGVLNDTYNDRVYLAPSVTLDISDRTSLT HHHHHHHHCCCHHHHHCCCCCEEEEEEEECCCCCCCCCCCCEEEECCEEEEEECCCCCEE LLASFKHDEGVPTNGFFPVYGTLNTSGGQIDPSTNLSQPDYDRNRNTQISAGYELAHQLN EEEECCCCCCCCCCCEEEEEEEEECCCCEECCCCCCCCCCCCCCCCCEEECHHHHHHHHC QTWEFKQNVRFNYNDLLLRQTYIFPTYEGTTAYRGLVYRDGDTKSATMDNQMVGYWNTDS CCHHHHCCCCCCCCCEEEEEEEEEECCCCCCHHCEEEEECCCCCCCCCCCCEEEEECCCC TEQTLLLGLDLQRHVNEGQEADNFGMGSINTMNPDYSGFPGFDESTTIHQKSTKGQSGLY CCEEEEEECCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCE AQHQIRWDDRWLLTGGGRFDYVETHNISEAKSKEEKQYDHELSLSGSLMYLADNGLSPYI EEEEEEECCEEEEECCCEEEEEECCCCHHHHHHHHHHHCCEECCCCCEEEEECCCCCCEE AYAESFEVLPGIDPNTQNSYKPLKGTLYETGVKYAPSFLDGYINLALFDLEQTNSLVSTG EECCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHCHHHHCCEEEEEEEEEHHCCCHHCCC SGQQTQAGEVTSQGVELEGSVQATEALRLTAAYTYTDAKTNDTGKGDRRASLIPRHIASF CCCCCCCCCHHHCCEEECCCCCHHHEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHH WGNYKVQQGVASGLELRTGVRYVGSSVGIGAVDASYNPIYGSAQVPAHTVWDAMIGYDFA HCCCEEHHHHHCCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH KNWRAQLNVNNLLGETYVASCDYYCYYGEPRSVVGSINYRW CCCEEEEEHHHHCCCCEEECCCEEEEECCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8576065 [H]