BacMap

Definition	Aeromonas salmonicida subsp. salmonicida A449, complete genome.
Accession	NC_009348
Length	4,702,402

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The map label for this gene is rhlB [H]

Identifier: 145301126

GI number: 145301126

Start: 4594806

End: 4596095

Strand: Direct

Name: rhlB [H]

Synonym: ASA_4295

Alternate gene names: 145301126

Gene position: 4594806-4596095 (Clockwise)

Preceding gene: 145301120

Following gene: 145301127

Centisome position: 97.71

GC content: 58.37

Gene sequence:

>1290_bases
ATGAGCAAAACACACTTAACGACCGAAAAATTCGCCCAAATGGGCCTCGAACCCGAAGTTCTGGCTGGTCTGGAATCAAA
GGGATTTCACTATTGCACGCCCATCCAGGCGCTGTCTCTGCCACTGCTGGTAGAAGGTCATGACCTCGCCGGTCAGGCTC
AGACAGGGACCGGCAAGACCATTGCCTTCCTGGCTGCGACATTCAACTATTTGCTGACCCACCCGCTGAGCAATCCCCGT
CTGGTTAACCAACCCAGAGCCATCATAATGGCGCCCACCCGGGAACTGGCAGTGCAGATCTACAACGATGCCGACACCAT
TTCCGCATCCACCGGCCTGAAACTCGGCCTCGCCTACGGTGGCGAAGGTTACGACAAGCAGCTGGCCGTGCTGGAGCAGG
GCGTCGACATCCTGATCGGCACCACGGGTCGCATCATCGACTACTTCAAGTCCAAGGTGATCGATCTGAGCAACATTCAG
GTCGTGGTGCTGGATGAAGCGGATCGCATGTTCGATCTGGGCTTCATCAAGGACATCCGCTTCCTGTTCCGCCGCATGCC
TGCCCCGACCGAGCGTCTGAGCATGCTGTTCTCCGCCACCCTCTCCCTGCGGGTGCAGGAGCTGGCCTACGAACACATGA
ACCACCCGGAACATGTGCAGATAGAGCCGGAGCAGATGACAGGCATCCGCATTCAGGAGGAGCTGTTCTACCCCTCCAAC
GAAGACAAGATGCTGCTGTTGCTCTCCCTGATGGAAGAAGAGTGGCCGGAAAAAGCCATCGTCTTCGCCAACACCAAGCA
TGTCTGTGAAGACGTGCATGCGTGGCTGGAGAATGACGGTCACCGCGTCGGTCTGCTGACCGGTGACGTGCCGCAGAAGA
AGCGGATGAAGATCCTGGAAGACTTCACCAAGGGAACCCTGGACATACTGGTCGCTACCGACGTGGCTGCCCGTGGTCTG
CACATTCCTGATGTGACCCACGTCTTCAACTACGACCTGCCCGACGATGCCGAAGACTATGTACACCGTATCGGTCGTAC
CGGTCGTGCCGGCAAGAGCGGTCACTCCATCAGCCTGGCCTGTGAAGACTATGCCTTCAACCTGCCGGCCATCGAGGAGT
ACATCCACCACCCGATCCCGGTCAGCAAATATGACCGTGAAGCGCTGCTGGATGACGTGACTGCCCCGAAACGGGTCGTT
CGCAACCGTCAGCCAGTGAACCGCAACATGCGGGATCGCCAGGGCGGTGGCAACAGCAACAACCGTCGTCGTCCGCCACG
CAAGAGCTGA

Upstream 100 bases:

>100_bases
CAGTAATTAAGGCTTTATTGACGTATCAACAAAGGCAATAGTTGCCCTATTTGAAATGATCCTGTTTATTATTGCAAGCC
TAACCTGATAACCTACCGCC

Downstream 100 bases:

>100_bases
AGGACAGGCCCAGTTGCACAACTCGCCTCTCTATGCCGCCATTGACCTCGGCTCCAACAGCTTTCACATGCTGGTGGTGC
GCGAGGTCGCCGGTGCCCTG

Product: ATP-dependent RNA helicase RhlB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 428

Protein sequence:

>429_residues
MSKTHLTTEKFAQMGLEPEVLAGLESKGFHYCTPIQALSLPLLVEGHDLAGQAQTGTGKTIAFLAATFNYLLTHPLSNPR
LVNQPRAIIMAPTRELAVQIYNDADTISASTGLKLGLAYGGEGYDKQLAVLEQGVDILIGTTGRIIDYFKSKVIDLSNIQ
VVVLDEADRMFDLGFIKDIRFLFRRMPAPTERLSMLFSATLSLRVQELAYEHMNHPEHVQIEPEQMTGIRIQEELFYPSN
EDKMLLLLSLMEEEWPEKAIVFANTKHVCEDVHAWLENDGHRVGLLTGDVPQKKRMKILEDFTKGTLDILVATDVAARGL
HIPDVTHVFNYDLPDDAEDYVHRIGRTGRAGKSGHSISLACEDYAFNLPAIEEYIHHPIPVSKYDREALLDDVTAPKRVV
RNRQPVNRNMRDRQGGGNSNNRRRPPRKS

Sequences:

>Translated_429_residues
MSKTHLTTEKFAQMGLEPEVLAGLESKGFHYCTPIQALSLPLLVEGHDLAGQAQTGTGKTIAFLAATFNYLLTHPLSNPR
LVNQPRAIIMAPTRELAVQIYNDADTISASTGLKLGLAYGGEGYDKQLAVLEQGVDILIGTTGRIIDYFKSKVIDLSNIQ
VVVLDEADRMFDLGFIKDIRFLFRRMPAPTERLSMLFSATLSLRVQELAYEHMNHPEHVQIEPEQMTGIRIQEELFYPSN
EDKMLLLLSLMEEEWPEKAIVFANTKHVCEDVHAWLENDGHRVGLLTGDVPQKKRMKILEDFTKGTLDILVATDVAARGL
HIPDVTHVFNYDLPDDAEDYVHRIGRTGRAGKSGHSISLACEDYAFNLPAIEEYIHHPIPVSKYDREALLDDVTAPKRVV
RNRQPVNRNMRDRQGGGNSNNRRRPPRKS
>Mature_428_residues
SKTHLTTEKFAQMGLEPEVLAGLESKGFHYCTPIQALSLPLLVEGHDLAGQAQTGTGKTIAFLAATFNYLLTHPLSNPRL
VNQPRAIIMAPTRELAVQIYNDADTISASTGLKLGLAYGGEGYDKQLAVLEQGVDILIGTTGRIIDYFKSKVIDLSNIQV
VVLDEADRMFDLGFIKDIRFLFRRMPAPTERLSMLFSATLSLRVQELAYEHMNHPEHVQIEPEQMTGIRIQEELFYPSNE
DKMLLLLSLMEEEWPEKAIVFANTKHVCEDVHAWLENDGHRVGLLTGDVPQKKRMKILEDFTKGTLDILVATDVAARGLH
IPDVTHVFNYDLPDDAEDYVHRIGRTGRAGKSGHSISLACEDYAFNLPAIEEYIHHPIPVSKYDREALLDDVTAPKRVVR
NRQPVNRNMRDRQGGGNSNNRRRPPRKS

Specific function: Can carry out ATP-dependent unwinding of double stranded RNA. Has a role in RNA decay. Involved in the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI222352149, Length=370, Percent_Identity=38.3783783783784, Blast_Score=229, Evalue=5e-60,
Organism=Homo sapiens, GI21071032, Length=365, Percent_Identity=33.972602739726, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI41327771, Length=396, Percent_Identity=34.5959595959596, Blast_Score=219, Evalue=4e-57,
Organism=Homo sapiens, GI262118318, Length=338, Percent_Identity=36.3905325443787, Blast_Score=213, Evalue=3e-55,
Organism=Homo sapiens, GI262231852, Length=338, Percent_Identity=36.3905325443787, Blast_Score=211, Evalue=7e-55,
Organism=Homo sapiens, GI216548263, Length=338, Percent_Identity=36.3905325443787, Blast_Score=211, Evalue=7e-55,
Organism=Homo sapiens, GI13518015, Length=338, Percent_Identity=36.3905325443787, Blast_Score=211, Evalue=8e-55,
Organism=Homo sapiens, GI45446747, Length=363, Percent_Identity=33.6088154269972, Blast_Score=208, Evalue=6e-54,
Organism=Homo sapiens, GI45446743, Length=363, Percent_Identity=33.6088154269972, Blast_Score=208, Evalue=6e-54,
Organism=Homo sapiens, GI301171467, Length=368, Percent_Identity=35.054347826087, Blast_Score=208, Evalue=8e-54,
Organism=Homo sapiens, GI87196351, Length=368, Percent_Identity=35.054347826087, Blast_Score=208, Evalue=9e-54,
Organism=Homo sapiens, GI301171475, Length=368, Percent_Identity=35.054347826087, Blast_Score=208, Evalue=9e-54,
Organism=Homo sapiens, GI148613856, Length=344, Percent_Identity=35.1744186046512, Blast_Score=207, Evalue=1e-53,
Organism=Homo sapiens, GI38201710, Length=344, Percent_Identity=35.1744186046512, Blast_Score=207, Evalue=1e-53,
Organism=Homo sapiens, GI224593278, Length=373, Percent_Identity=34.5844504021448, Blast_Score=206, Evalue=3e-53,
Organism=Homo sapiens, GI169881239, Length=368, Percent_Identity=34.7826086956522, Blast_Score=205, Evalue=5e-53,
Organism=Homo sapiens, GI13514809, Length=368, Percent_Identity=34.7826086956522, Blast_Score=205, Evalue=5e-53,
Organism=Homo sapiens, GI41327773, Length=363, Percent_Identity=36.0881542699724, Blast_Score=205, Evalue=5e-53,
Organism=Homo sapiens, GI55749865, Length=347, Percent_Identity=33.4293948126801, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI4758138, Length=353, Percent_Identity=33.7110481586402, Blast_Score=201, Evalue=9e-52,
Organism=Homo sapiens, GI7661920, Length=373, Percent_Identity=32.171581769437, Blast_Score=200, Evalue=3e-51,
Organism=Homo sapiens, GI164419743, Length=355, Percent_Identity=33.2394366197183, Blast_Score=198, Evalue=6e-51,
Organism=Homo sapiens, GI51094101, Length=355, Percent_Identity=33.2394366197183, Blast_Score=198, Evalue=6e-51,
Organism=Homo sapiens, GI20149629, Length=420, Percent_Identity=30.4761904761905, Blast_Score=193, Evalue=2e-49,
Organism=Homo sapiens, GI50659095, Length=373, Percent_Identity=32.7077747989276, Blast_Score=186, Evalue=4e-47,
Organism=Homo sapiens, GI13129006, Length=361, Percent_Identity=35.1800554016621, Blast_Score=181, Evalue=8e-46,
Organism=Homo sapiens, GI164664518, Length=395, Percent_Identity=30.126582278481, Blast_Score=179, Evalue=4e-45,
Organism=Homo sapiens, GI41327779, Length=381, Percent_Identity=33.8582677165354, Blast_Score=176, Evalue=5e-44,
Organism=Homo sapiens, GI6005743, Length=386, Percent_Identity=32.6424870466321, Blast_Score=172, Evalue=4e-43,
Organism=Homo sapiens, GI8922886, Length=385, Percent_Identity=31.9480519480519, Blast_Score=172, Evalue=8e-43,
Organism=Homo sapiens, GI13514831, Length=396, Percent_Identity=29.040404040404, Blast_Score=170, Evalue=3e-42,
Organism=Homo sapiens, GI31542656, Length=375, Percent_Identity=31.4666666666667, Blast_Score=169, Evalue=5e-42,
Organism=Homo sapiens, GI38327634, Length=372, Percent_Identity=30.6451612903226, Blast_Score=166, Evalue=3e-41,
Organism=Homo sapiens, GI17505907, Length=454, Percent_Identity=29.5154185022026, Blast_Score=165, Evalue=7e-41,
Organism=Homo sapiens, GI164419732, Length=369, Percent_Identity=31.9783197831978, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI41327776, Length=421, Percent_Identity=28.5035629453682, Blast_Score=160, Evalue=2e-39,
Organism=Homo sapiens, GI62241022, Length=365, Percent_Identity=33.1506849315069, Blast_Score=160, Evalue=2e-39,
Organism=Homo sapiens, GI188035877, Length=347, Percent_Identity=29.3948126801153, Blast_Score=159, Evalue=4e-39,
Organism=Homo sapiens, GI4758112, Length=366, Percent_Identity=28.6885245901639, Blast_Score=158, Evalue=9e-39,
Organism=Homo sapiens, GI18375623, Length=366, Percent_Identity=28.6885245901639, Blast_Score=158, Evalue=9e-39,
Organism=Homo sapiens, GI21040371, Length=366, Percent_Identity=28.6885245901639, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI9506931, Length=398, Percent_Identity=28.391959798995, Blast_Score=156, Evalue=4e-38,
Organism=Homo sapiens, GI38569503, Length=382, Percent_Identity=28.7958115183246, Blast_Score=155, Evalue=5e-38,
Organism=Homo sapiens, GI4503529, Length=378, Percent_Identity=31.2169312169312, Blast_Score=155, Evalue=6e-38,
Organism=Homo sapiens, GI38569505, Length=378, Percent_Identity=29.1005291005291, Blast_Score=155, Evalue=6e-38,
Organism=Homo sapiens, GI62241024, Length=372, Percent_Identity=31.989247311828, Blast_Score=153, Evalue=3e-37,
Organism=Homo sapiens, GI83700235, Length=378, Percent_Identity=30.952380952381, Blast_Score=151, Evalue=9e-37,
Organism=Homo sapiens, GI256773275, Length=415, Percent_Identity=28.433734939759, Blast_Score=143, Evalue=3e-34,
Organism=Homo sapiens, GI256223453, Length=368, Percent_Identity=28.2608695652174, Blast_Score=142, Evalue=5e-34,
Organism=Homo sapiens, GI4826686, Length=336, Percent_Identity=31.8452380952381, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI9966805, Length=314, Percent_Identity=30.8917197452229, Blast_Score=129, Evalue=4e-30,
Organism=Homo sapiens, GI154759257, Length=422, Percent_Identity=27.0142180094787, Blast_Score=122, Evalue=5e-28,
Organism=Homo sapiens, GI20336298, Length=220, Percent_Identity=34.0909090909091, Blast_Score=117, Evalue=2e-26,
Organism=Escherichia coli, GI1790214, Length=424, Percent_Identity=70.2830188679245, Blast_Score=609, Evalue=1e-175,
Organism=Escherichia coli, GI1787016, Length=372, Percent_Identity=37.6344086021505, Blast_Score=256, Evalue=2e-69,
Organism=Escherichia coli, GI87082221, Length=371, Percent_Identity=38.2749326145553, Blast_Score=241, Evalue=5e-65,
Organism=Escherichia coli, GI1788930, Length=382, Percent_Identity=35.6020942408377, Blast_Score=221, Evalue=7e-59,
Organism=Escherichia coli, GI1787605, Length=351, Percent_Identity=34.1880341880342, Blast_Score=189, Evalue=3e-49,
Organism=Caenorhabditis elegans, GI17510307, Length=363, Percent_Identity=37.7410468319559, Blast_Score=224, Evalue=6e-59,
Organism=Caenorhabditis elegans, GI17510309, Length=363, Percent_Identity=37.7410468319559, Blast_Score=224, Evalue=6e-59,
Organism=Caenorhabditis elegans, GI71995718, Length=363, Percent_Identity=37.465564738292, Blast_Score=224, Evalue=8e-59,
Organism=Caenorhabditis elegans, GI71995514, Length=363, Percent_Identity=37.7410468319559, Blast_Score=224, Evalue=9e-59,
Organism=Caenorhabditis elegans, GI86570094, Length=376, Percent_Identity=36.436170212766, Blast_Score=219, Evalue=2e-57,
Organism=Caenorhabditis elegans, GI17510559, Length=381, Percent_Identity=32.8083989501312, Blast_Score=211, Evalue=5e-55,
Organism=Caenorhabditis elegans, GI32565321, Length=382, Percent_Identity=33.5078534031414, Blast_Score=206, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI17507877, Length=379, Percent_Identity=34.8284960422164, Blast_Score=201, Evalue=7e-52,
Organism=Caenorhabditis elegans, GI17507945, Length=342, Percent_Identity=33.6257309941521, Blast_Score=200, Evalue=1e-51,
Organism=Caenorhabditis elegans, GI17507879, Length=377, Percent_Identity=34.7480106100796, Blast_Score=199, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI71995724, Length=370, Percent_Identity=31.6216216216216, Blast_Score=197, Evalue=1e-50,
Organism=Caenorhabditis elegans, GI17507121, Length=370, Percent_Identity=31.6216216216216, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI115533224, Length=402, Percent_Identity=31.0945273631841, Blast_Score=194, Evalue=6e-50,
Organism=Caenorhabditis elegans, GI17555296, Length=355, Percent_Identity=32.9577464788732, Blast_Score=194, Evalue=6e-50,
Organism=Caenorhabditis elegans, GI71987143, Length=368, Percent_Identity=33.1521739130435, Blast_Score=194, Evalue=6e-50,
Organism=Caenorhabditis elegans, GI71999646, Length=443, Percent_Identity=30.4740406320542, Blast_Score=190, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI71999644, Length=401, Percent_Identity=31.1720698254364, Blast_Score=189, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI17552642, Length=355, Percent_Identity=33.2394366197183, Blast_Score=189, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI17507881, Length=373, Percent_Identity=34.5844504021448, Blast_Score=189, Evalue=3e-48,
Organism=Caenorhabditis elegans, GI17537549, Length=357, Percent_Identity=33.8935574229692, Blast_Score=183, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI115532548, Length=410, Percent_Identity=30.4878048780488, Blast_Score=181, Evalue=5e-46,
Organism=Caenorhabditis elegans, GI115532546, Length=387, Percent_Identity=31.0077519379845, Blast_Score=181, Evalue=5e-46,
Organism=Caenorhabditis elegans, GI17509811, Length=394, Percent_Identity=30.2030456852792, Blast_Score=169, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI17505370, Length=360, Percent_Identity=33.3333333333333, Blast_Score=165, Evalue=4e-41,
Organism=Caenorhabditis elegans, GI17508543, Length=418, Percent_Identity=29.4258373205742, Blast_Score=165, Evalue=5e-41,
Organism=Caenorhabditis elegans, GI193208216, Length=377, Percent_Identity=31.5649867374005, Blast_Score=164, Evalue=6e-41,
Organism=Caenorhabditis elegans, GI17552114, Length=378, Percent_Identity=29.8941798941799, Blast_Score=161, Evalue=7e-40,
Organism=Caenorhabditis elegans, GI71990816, Length=353, Percent_Identity=33.7110481586402, Blast_Score=159, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI71982858, Length=357, Percent_Identity=28.5714285714286, Blast_Score=151, Evalue=8e-37,
Organism=Caenorhabditis elegans, GI17536099, Length=411, Percent_Identity=30.4136253041363, Blast_Score=149, Evalue=3e-36,
Organism=Caenorhabditis elegans, GI17536101, Length=411, Percent_Identity=30.4136253041363, Blast_Score=148, Evalue=5e-36,
Organism=Caenorhabditis elegans, GI17536103, Length=413, Percent_Identity=30.5084745762712, Blast_Score=145, Evalue=5e-35,
Organism=Caenorhabditis elegans, GI17507641, Length=387, Percent_Identity=29.1989664082687, Blast_Score=143, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI193206561, Length=360, Percent_Identity=28.3333333333333, Blast_Score=135, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI32564046, Length=377, Percent_Identity=28.6472148541114, Blast_Score=133, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI25148291, Length=330, Percent_Identity=28.4848484848485, Blast_Score=125, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI17556951, Length=367, Percent_Identity=27.2479564032698, Blast_Score=122, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI17553716, Length=363, Percent_Identity=28.3746556473829, Blast_Score=122, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI25148203, Length=415, Percent_Identity=23.6144578313253, Blast_Score=119, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI71997889, Length=405, Percent_Identity=27.6543209876543, Blast_Score=109, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI17557982, Length=362, Percent_Identity=25.1381215469613, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI71987152, Length=92, Percent_Identity=43.4782608695652, Blast_Score=89, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI71982862, Length=207, Percent_Identity=28.5024154589372, Blast_Score=84, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6324778, Length=423, Percent_Identity=35.2245862884161, Blast_Score=234, Evalue=3e-62,
Organism=Saccharomyces cerevisiae, GI6325138, Length=359, Percent_Identity=36.4902506963788, Blast_Score=229, Evalue=4e-61,
Organism=Saccharomyces cerevisiae, GI6324217, Length=387, Percent_Identity=34.625322997416, Blast_Score=229, Evalue=8e-61,
Organism=Saccharomyces cerevisiae, GI6321360, Length=380, Percent_Identity=36.3157894736842, Blast_Score=217, Evalue=2e-57,
Organism=Saccharomyces cerevisiae, GI6321856, Length=384, Percent_Identity=34.375, Blast_Score=206, Evalue=8e-54,
Organism=Saccharomyces cerevisiae, GI6323021, Length=361, Percent_Identity=32.6869806094183, Blast_Score=201, Evalue=2e-52,
Organism=Saccharomyces cerevisiae, GI6320041, Length=363, Percent_Identity=33.3333333333333, Blast_Score=196, Evalue=5e-51,
Organism=Saccharomyces cerevisiae, GI6323947, Length=359, Percent_Identity=35.0974930362117, Blast_Score=194, Evalue=3e-50,
Organism=Saccharomyces cerevisiae, GI6324620, Length=378, Percent_Identity=32.010582010582, Blast_Score=181, Evalue=1e-46,
Organism=Saccharomyces cerevisiae, GI6320224, Length=389, Percent_Identity=30.5912596401028, Blast_Score=181, Evalue=2e-46,
Organism=Saccharomyces cerevisiae, GI6320449, Length=356, Percent_Identity=30.3370786516854, Blast_Score=179, Evalue=1e-45,
Organism=Saccharomyces cerevisiae, GI6322427, Length=358, Percent_Identity=33.5195530726257, Blast_Score=175, Evalue=1e-44,
Organism=Saccharomyces cerevisiae, GI6322912, Length=337, Percent_Identity=32.6409495548961, Blast_Score=174, Evalue=2e-44,
Organism=Saccharomyces cerevisiae, GI6322323, Length=337, Percent_Identity=32.6409495548961, Blast_Score=174, Evalue=2e-44,
Organism=Saccharomyces cerevisiae, GI6319714, Length=381, Percent_Identity=30.7086614173228, Blast_Score=173, Evalue=4e-44,
Organism=Saccharomyces cerevisiae, GI6321963, Length=429, Percent_Identity=30.3030303030303, Blast_Score=168, Evalue=1e-42,
Organism=Saccharomyces cerevisiae, GI6320400, Length=390, Percent_Identity=31.025641025641, Blast_Score=154, Evalue=2e-38,
Organism=Saccharomyces cerevisiae, GI6321111, Length=368, Percent_Identity=29.0760869565217, Blast_Score=152, Evalue=1e-37,
Organism=Saccharomyces cerevisiae, GI6321267, Length=346, Percent_Identity=29.7687861271676, Blast_Score=142, Evalue=1e-34,
Organism=Saccharomyces cerevisiae, GI6320119, Length=358, Percent_Identity=27.9329608938547, Blast_Score=138, Evalue=2e-33,
Organism=Saccharomyces cerevisiae, GI6323306, Length=410, Percent_Identity=25.609756097561, Blast_Score=132, Evalue=9e-32,
Organism=Saccharomyces cerevisiae, GI6320173, Length=253, Percent_Identity=31.2252964426877, Blast_Score=132, Evalue=1e-31,
Organism=Saccharomyces cerevisiae, GI6322876, Length=471, Percent_Identity=29.723991507431, Blast_Score=131, Evalue=2e-31,
Organism=Saccharomyces cerevisiae, GI6319618, Length=409, Percent_Identity=27.8728606356968, Blast_Score=124, Evalue=2e-29,
Organism=Saccharomyces cerevisiae, GI6324366, Length=356, Percent_Identity=26.4044943820225, Blast_Score=117, Evalue=3e-27,
Organism=Saccharomyces cerevisiae, GI6321374, Length=401, Percent_Identity=25.4364089775561, Blast_Score=100, Evalue=3e-22,
Organism=Drosophila melanogaster, GI21356161, Length=434, Percent_Identity=34.7926267281106, Blast_Score=234, Evalue=7e-62,
Organism=Drosophila melanogaster, GI24584399, Length=351, Percent_Identity=34.4729344729345, Blast_Score=225, Evalue=4e-59,
Organism=Drosophila melanogaster, GI21355075, Length=360, Percent_Identity=38.3333333333333, Blast_Score=221, Evalue=8e-58,
Organism=Drosophila melanogaster, GI17985987, Length=347, Percent_Identity=37.7521613832853, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI17977678, Length=356, Percent_Identity=34.2696629213483, Blast_Score=215, Evalue=6e-56,
Organism=Drosophila melanogaster, GI28574962, Length=356, Percent_Identity=36.5168539325843, Blast_Score=213, Evalue=2e-55,
Organism=Drosophila melanogaster, GI24662330, Length=354, Percent_Identity=35.8757062146893, Blast_Score=211, Evalue=9e-55,
Organism=Drosophila melanogaster, GI24642151, Length=369, Percent_Identity=35.7723577235772, Blast_Score=208, Evalue=5e-54,
Organism=Drosophila melanogaster, GI24584994, Length=378, Percent_Identity=34.1269841269841, Blast_Score=207, Evalue=2e-53,
Organism=Drosophila melanogaster, GI24644479, Length=373, Percent_Identity=32.9758713136729, Blast_Score=202, Evalue=3e-52,
Organism=Drosophila melanogaster, GI281361218, Length=373, Percent_Identity=32.9758713136729, Blast_Score=202, Evalue=4e-52,
Organism=Drosophila melanogaster, GI24644481, Length=373, Percent_Identity=32.9758713136729, Blast_Score=202, Evalue=4e-52,
Organism=Drosophila melanogaster, GI24644483, Length=373, Percent_Identity=32.9758713136729, Blast_Score=202, Evalue=4e-52,
Organism=Drosophila melanogaster, GI24644487, Length=373, Percent_Identity=32.9758713136729, Blast_Score=202, Evalue=4e-52,
Organism=Drosophila melanogaster, GI45551833, Length=373, Percent_Identity=32.9758713136729, Blast_Score=202, Evalue=4e-52,
Organism=Drosophila melanogaster, GI24644485, Length=373, Percent_Identity=32.9758713136729, Blast_Score=202, Evalue=4e-52,
Organism=Drosophila melanogaster, GI18857967, Length=426, Percent_Identity=32.3943661971831, Blast_Score=196, Evalue=3e-50,
Organism=Drosophila melanogaster, GI24645031, Length=370, Percent_Identity=32.972972972973, Blast_Score=196, Evalue=3e-50,
Organism=Drosophila melanogaster, GI28575014, Length=381, Percent_Identity=30.9711286089239, Blast_Score=191, Evalue=7e-49,
Organism=Drosophila melanogaster, GI24585582, Length=353, Percent_Identity=30.5949008498584, Blast_Score=177, Evalue=1e-44,
Organism=Drosophila melanogaster, GI24666101, Length=361, Percent_Identity=31.3019390581717, Blast_Score=176, Evalue=2e-44,
Organism=Drosophila melanogaster, GI28571808, Length=345, Percent_Identity=33.0434782608696, Blast_Score=175, Evalue=4e-44,
Organism=Drosophila melanogaster, GI28571809, Length=345, Percent_Identity=33.0434782608696, Blast_Score=175, Evalue=4e-44,
Organism=Drosophila melanogaster, GI24583281, Length=374, Percent_Identity=29.144385026738, Blast_Score=170, Evalue=2e-42,
Organism=Drosophila melanogaster, GI24583279, Length=374, Percent_Identity=29.144385026738, Blast_Score=169, Evalue=3e-42,
Organism=Drosophila melanogaster, GI24582080, Length=379, Percent_Identity=31.3984168865435, Blast_Score=169, Evalue=4e-42,
Organism=Drosophila melanogaster, GI24582078, Length=379, Percent_Identity=31.3984168865435, Blast_Score=169, Evalue=4e-42,
Organism=Drosophila melanogaster, GI17136248, Length=379, Percent_Identity=31.3984168865435, Blast_Score=169, Evalue=4e-42,
Organism=Drosophila melanogaster, GI24582075, Length=379, Percent_Identity=31.3984168865435, Blast_Score=169, Evalue=4e-42,
Organism=Drosophila melanogaster, GI281365720, Length=317, Percent_Identity=34.384858044164, Blast_Score=166, Evalue=3e-41,
Organism=Drosophila melanogaster, GI24642822, Length=407, Percent_Identity=30.2211302211302, Blast_Score=164, Evalue=9e-41,
Organism=Drosophila melanogaster, GI17136814, Length=394, Percent_Identity=30.2030456852792, Blast_Score=164, Evalue=1e-40,
Organism=Drosophila melanogaster, GI24643725, Length=393, Percent_Identity=28.2442748091603, Blast_Score=159, Evalue=3e-39,
Organism=Drosophila melanogaster, GI21355559, Length=381, Percent_Identity=31.2335958005249, Blast_Score=153, Evalue=2e-37,
Organism=Drosophila melanogaster, GI17647335, Length=360, Percent_Identity=31.6666666666667, Blast_Score=153, Evalue=2e-37,
Organism=Drosophila melanogaster, GI19920478, Length=353, Percent_Identity=30.5949008498584, Blast_Score=152, Evalue=4e-37,
Organism=Drosophila melanogaster, GI24581954, Length=358, Percent_Identity=30.4469273743017, Blast_Score=150, Evalue=1e-36,
Organism=Drosophila melanogaster, GI24581952, Length=358, Percent_Identity=30.4469273743017, Blast_Score=150, Evalue=1e-36,
Organism=Drosophila melanogaster, GI24581956, Length=358, Percent_Identity=30.4469273743017, Blast_Score=150, Evalue=1e-36,
Organism=Drosophila melanogaster, GI18859659, Length=460, Percent_Identity=27.3913043478261, Blast_Score=145, Evalue=4e-35,
Organism=Drosophila melanogaster, GI28571338, Length=460, Percent_Identity=27.3913043478261, Blast_Score=145, Evalue=4e-35,
Organism=Drosophila melanogaster, GI20130173, Length=435, Percent_Identity=28.2758620689655, Blast_Score=140, Evalue=1e-33,
Organism=Drosophila melanogaster, GI24668515, Length=328, Percent_Identity=32.3170731707317, Blast_Score=135, Evalue=6e-32,
Organism=Drosophila melanogaster, GI17136666, Length=417, Percent_Identity=24.4604316546763, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24640164, Length=353, Percent_Identity=25.4957507082153, Blast_Score=112, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 48216; Mature: 48085

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTHLTTEKFAQMGLEPEVLAGLESKGFHYCTPIQALSLPLLVEGHDLAGQAQTGTGKT
CCCCCCCHHHHHHCCCCHHHHHCCCCCCCEEECCHHHHCCCEEEECCCCCCCCCCCCCCH
IAFLAATFNYLLTHPLSNPRLVNQPRAIIMAPTRELAVQIYNDADTISASTGLKLGLAYG
HHHHHHHHHHHHHCCCCCCEECCCCCEEEEECCHHHEEEEECCCCCEECCCCCEEEEEEC
GEGYDKQLAVLEQGVDILIGTTGRIIDYFKSKVIDLSNIQVVVLDEADRMFDLGFIKDIR
CCCCHHHHHHHHCCCEEEEECCHHHHHHHHHHCEEECCEEEEEECCCCCHHHHHHHHHHH
FLFRRMPAPTERLSMLFSATLSLRVQELAYEHMNHPEHVQIEPEQMTGIRIQEELFYPSN
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHCCEEEEHHHCCCCC
EDKMLLLLSLMEEEWPEKAIVFANTKHVCEDVHAWLENDGHRVGLLTGDVPQKKRMKILE
CCCEEHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHH
DFTKGTLDILVATDVAARGLHIPDVTHVFNYDLPDDAEDYVHRIGRTGRAGKSGHSISLA
HHCCCCEEEEEEECHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEE
CEDYAFNLPAIEEYIHHPIPVSKYDREALLDDVTAPKRVVRNRQPVNRNMRDRQGGGNSN
ECCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHCCCCCCCCCHHCCCCCCCC
NRRRPPRKS
CCCCCCCCC
>Mature Secondary Structure 
SKTHLTTEKFAQMGLEPEVLAGLESKGFHYCTPIQALSLPLLVEGHDLAGQAQTGTGKT
CCCCCCHHHHHHCCCCHHHHHCCCCCCCEEECCHHHHCCCEEEECCCCCCCCCCCCCCH
IAFLAATFNYLLTHPLSNPRLVNQPRAIIMAPTRELAVQIYNDADTISASTGLKLGLAYG
HHHHHHHHHHHHHCCCCCCEECCCCCEEEEECCHHHEEEEECCCCCEECCCCCEEEEEEC
GEGYDKQLAVLEQGVDILIGTTGRIIDYFKSKVIDLSNIQVVVLDEADRMFDLGFIKDIR
CCCCHHHHHHHHCCCEEEEECCHHHHHHHHHHCEEECCEEEEEECCCCCHHHHHHHHHHH
FLFRRMPAPTERLSMLFSATLSLRVQELAYEHMNHPEHVQIEPEQMTGIRIQEELFYPSN
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHCCEEEEHHHCCCCC
EDKMLLLLSLMEEEWPEKAIVFANTKHVCEDVHAWLENDGHRVGLLTGDVPQKKRMKILE
CCCEEHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHH
DFTKGTLDILVATDVAARGLHIPDVTHVFNYDLPDDAEDYVHRIGRTGRAGKSGHSISLA
HHCCCCEEEEEEECHHHCCCCCCCHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEE
CEDYAFNLPAIEEYIHHPIPVSKYDREALLDDVTAPKRVVRNRQPVNRNMRDRQGGGNSN
ECCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHCCCHHHHHHCCCCCCCCCHHCCCCCCCC
NRRRPPRKS
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA