| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is livG [H]
Identifier: 145301113
GI number: 145301113
Start: 4582082
End: 4582840
Strand: Direct
Name: livG [H]
Synonym: ASA_4282
Alternate gene names: 145301113
Gene position: 4582082-4582840 (Clockwise)
Preceding gene: 145301112
Following gene: 145301114
Centisome position: 97.44
GC content: 61.26
Gene sequence:
>759_bases ATGAGCGCGAATCAGAAGAAGTTATTGGAAGTCTCTGATCTGTCGATGCGCTTTGGTGGACTGCTCGCAGTCAACGGCGT CAAGCTGGATGTCGACAAAGGGGAGGTTATCTCCATCATAGGACCGAACGGCGCGGGCAAGACCACCGGCTTCTACCGCC CGAGCGGCGGCACCATCCGCTACAAGGGCGAGGAGATCCAGGGGCTGCCCGGTCACCTCATAGCGCGCAAGGGAATTGTG CGCACCTTCCAGCATGTACGGCTGTTCAAGGAGATGACAGCGGTGGAGAACCTGCTGGTCGCCCAGCACAGGCACCTCAA CACCGGCTTTATCGCCGGTCTGTTCAAGACAGCGGCCTTTCGCCGTGCCGAGCAGGAGGGGCTGGAACAGGCCGCCTTCT GGCTGGAGAAGGTAGGGCTCAAGGATCTCGCCAATCGGGCCGCCGGCAACCTGGCTTATGGTCAGCAACGCCGCCTCGAG ATAGCCCGCTGCATGGCGACCCGGCCCGACCTGCTGATGCTGGACGAACCGGCCGCCGGCCTCAACCCGAACGAAACCGA TGAGCTGAACGATCTCATCATCAGCTTGCGGGACGAGTTCGGCGTCTCCGTGCTGCTGATTGAGCACGACATGAAGCTGG TGATGGGCATCTCCAACCGCATCTTCGTGGTCAATCAGGGGACGCCGCTGGCCCACGGCAAGCCGGATGAGATCCGCAAC AATCCGGCTGTGATCAAGGCCTATCTGGGCGAATCGTAG
Upstream 100 bases:
>100_bases AGTACCGCATGCTGATGTTCGGCCTCTTGATGGTGTTCATGATGATCTGGCGGCCACAAGGACTGCTGCCGATGACCAGA CCTCACCTGGAGCTACAAAA
Downstream 100 bases:
>100_bases GACCCAAGGAGTCACGATGTTAGAACTTCGCAACGTATCGACCCACTACGGCAAAATTCAGGCGCTGCACGACGTCAGCG TCGAGGTAAAAGAGGGGGAA
Product: leucine/isoleucine/valine transporter ATP-binding subunit
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MSANQKKLLEVSDLSMRFGGLLAVNGVKLDVDKGEVISIIGPNGAGKTTGFYRPSGGTIRYKGEEIQGLPGHLIARKGIV RTFQHVRLFKEMTAVENLLVAQHRHLNTGFIAGLFKTAAFRRAEQEGLEQAAFWLEKVGLKDLANRAAGNLAYGQQRRLE IARCMATRPDLLMLDEPAAGLNPNETDELNDLIISLRDEFGVSVLLIEHDMKLVMGISNRIFVVNQGTPLAHGKPDEIRN NPAVIKAYLGES
Sequences:
>Translated_252_residues MSANQKKLLEVSDLSMRFGGLLAVNGVKLDVDKGEVISIIGPNGAGKTTGFYRPSGGTIRYKGEEIQGLPGHLIARKGIV RTFQHVRLFKEMTAVENLLVAQHRHLNTGFIAGLFKTAAFRRAEQEGLEQAAFWLEKVGLKDLANRAAGNLAYGQQRRLE IARCMATRPDLLMLDEPAAGLNPNETDELNDLIISLRDEFGVSVLLIEHDMKLVMGISNRIFVVNQGTPLAHGKPDEIRN NPAVIKAYLGES >Mature_251_residues SANQKKLLEVSDLSMRFGGLLAVNGVKLDVDKGEVISIIGPNGAGKTTGFYRPSGGTIRYKGEEIQGLPGHLIARKGIVR TFQHVRLFKEMTAVENLLVAQHRHLNTGFIAGLFKTAAFRRAEQEGLEQAAFWLEKVGLKDLANRAAGNLAYGQQRRLEI ARCMATRPDLLMLDEPAAGLNPNETDELNDLIISLRDEFGVSVLLIEHDMKLVMGISNRIFVVNQGTPLAHGKPDEIRNN PAVIKAYLGES
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0411
COG function: function code E; ABC-type branched-chain amino acid transport systems, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI150417984, Length=247, Percent_Identity=27.9352226720648, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI27881501, Length=224, Percent_Identity=27.6785714285714, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI30795238, Length=224, Percent_Identity=27.6785714285714, Blast_Score=78, Evalue=6e-15, Organism=Homo sapiens, GI105990541, Length=231, Percent_Identity=27.2727272727273, Blast_Score=78, Evalue=8e-15, Organism=Homo sapiens, GI45446740, Length=233, Percent_Identity=29.1845493562232, Blast_Score=74, Evalue=8e-14, Organism=Homo sapiens, GI47078218, Length=233, Percent_Identity=29.1845493562232, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI31657092, Length=230, Percent_Identity=25.6521739130435, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI21536376, Length=230, Percent_Identity=26.5217391304348, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI46592898, Length=219, Percent_Identity=27.3972602739726, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI46592956, Length=219, Percent_Identity=27.3972602739726, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI46592915, Length=219, Percent_Identity=27.3972602739726, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI46592964, Length=219, Percent_Identity=27.3972602739726, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI46592971, Length=219, Percent_Identity=27.3972602739726, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI46592978, Length=219, Percent_Identity=27.3972602739726, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI116734710, Length=228, Percent_Identity=26.7543859649123, Blast_Score=65, Evalue=4e-11, Organism=Escherichia coli, GI1789864, Length=253, Percent_Identity=65.2173913043478, Blast_Score=347, Evalue=3e-97, Organism=Escherichia coli, GI1789593, Length=249, Percent_Identity=32.5301204819277, Blast_Score=127, Evalue=5e-31, Organism=Escherichia coli, GI87081791, Length=242, Percent_Identity=30.5785123966942, Blast_Score=114, Evalue=4e-27, Organism=Escherichia coli, GI87081709, Length=257, Percent_Identity=28.0155642023346, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1788761, Length=253, Percent_Identity=28.8537549407115, Blast_Score=111, Evalue=4e-26, Organism=Escherichia coli, GI87082268, Length=254, Percent_Identity=28.740157480315, Blast_Score=103, Evalue=9e-24, Organism=Escherichia coli, GI1789991, Length=229, Percent_Identity=33.1877729257642, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1786563, Length=229, Percent_Identity=32.7510917030568, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1789032, Length=252, Percent_Identity=29.7619047619048, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1787500, Length=265, Percent_Identity=29.0566037735849, Blast_Score=98, Evalue=5e-22, Organism=Escherichia coli, GI1787712, Length=252, Percent_Identity=26.984126984127, Blast_Score=98, Evalue=6e-22, Organism=Escherichia coli, GI1788225, Length=248, Percent_Identity=29.0322580645161, Blast_Score=97, Evalue=9e-22, Organism=Escherichia coli, GI1787029, Length=242, Percent_Identity=26.4462809917355, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1790525, Length=233, Percent_Identity=30.9012875536481, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1789672, Length=256, Percent_Identity=24.21875, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1786253, Length=243, Percent_Identity=27.5720164609054, Blast_Score=94, Evalue=9e-21, Organism=Escherichia coli, GI1786872, Length=212, Percent_Identity=28.7735849056604, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI87081782, Length=244, Percent_Identity=29.5081967213115, Blast_Score=93, Evalue=1e-20, Organism=Escherichia coli, GI1788644, Length=262, Percent_Identity=32.0610687022901, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1786398, Length=228, Percent_Identity=28.5087719298246, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1787370, Length=252, Percent_Identity=26.984126984127, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1789586, Length=250, Percent_Identity=28.8, Blast_Score=91, Evalue=9e-20, Organism=Escherichia coli, GI48994943, Length=241, Percent_Identity=28.2157676348548, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI48995001, Length=235, Percent_Identity=28.0851063829787, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI1790162, Length=243, Percent_Identity=27.5720164609054, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI1788165, Length=248, Percent_Identity=26.6129032258064, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI1787089, Length=236, Percent_Identity=26.271186440678, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1788450, Length=254, Percent_Identity=25.9842519685039, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI145693107, Length=259, Percent_Identity=30.8880308880309, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1789873, Length=221, Percent_Identity=31.6742081447964, Blast_Score=84, Evalue=7e-18, Organism=Escherichia coli, GI1789962, Length=231, Percent_Identity=25.1082251082251, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1788210, Length=239, Percent_Identity=25.9414225941423, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1790190, Length=231, Percent_Identity=28.1385281385281, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1790544, Length=249, Percent_Identity=24.4979919678715, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI48994997, Length=252, Percent_Identity=27.7777777777778, Blast_Score=81, Evalue=5e-17, Organism=Escherichia coli, GI1786703, Length=213, Percent_Identity=27.6995305164319, Blast_Score=81, Evalue=8e-17, Organism=Escherichia coli, GI1786803, Length=241, Percent_Identity=24.896265560166, Blast_Score=81, Evalue=9e-17, Organism=Escherichia coli, GI1787758, Length=228, Percent_Identity=25.4385964912281, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1787105, Length=252, Percent_Identity=26.1904761904762, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI48994883, Length=259, Percent_Identity=25.8687258687259, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1789891, Length=243, Percent_Identity=28.8065843621399, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1787164, Length=231, Percent_Identity=24.6753246753247, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI1790467, Length=241, Percent_Identity=24.0663900414938, Blast_Score=77, Evalue=8e-16, Organism=Escherichia coli, GI1788897, Length=223, Percent_Identity=28.2511210762332, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1788472, Length=231, Percent_Identity=24.6753246753247, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1786345, Length=232, Percent_Identity=28.8793103448276, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI87081834, Length=231, Percent_Identity=26.4069264069264, Blast_Score=74, Evalue=7e-15, Organism=Escherichia coli, GI87082267, Length=235, Percent_Identity=25.1063829787234, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI1789963, Length=255, Percent_Identity=27.4509803921569, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI1787792, Length=258, Percent_Identity=26.7441860465116, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1787759, Length=263, Percent_Identity=25.0950570342205, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1786319, Length=226, Percent_Identity=25.6637168141593, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI1787972, Length=244, Percent_Identity=28.2786885245902, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI1790739, Length=236, Percent_Identity=26.271186440678, Blast_Score=67, Evalue=9e-13, Organism=Escherichia coli, GI1786975, Length=200, Percent_Identity=28.5, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1788506, Length=245, Percent_Identity=26.530612244898, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787112, Length=224, Percent_Identity=29.0178571428571, Blast_Score=63, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71983516, Length=238, Percent_Identity=27.7310924369748, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI71983510, Length=238, Percent_Identity=27.7310924369748, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI71983523, Length=238, Percent_Identity=27.7310924369748, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI115533608, Length=234, Percent_Identity=27.3504273504274, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17565938, Length=225, Percent_Identity=26.6666666666667, Blast_Score=64, Evalue=6e-11, Organism=Drosophila melanogaster, GI24666092, Length=226, Percent_Identity=29.646017699115, Blast_Score=82, Evalue=5e-16, Organism=Drosophila melanogaster, GI28574150, Length=244, Percent_Identity=29.9180327868852, Blast_Score=81, Evalue=7e-16, Organism=Drosophila melanogaster, GI116007328, Length=244, Percent_Identity=29.9180327868852, Blast_Score=81, Evalue=7e-16, Organism=Drosophila melanogaster, GI24643674, Length=232, Percent_Identity=28.8793103448276, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI24648314, Length=240, Percent_Identity=25.4166666666667, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI221512771, Length=232, Percent_Identity=27.1551724137931, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI28571209, Length=217, Percent_Identity=26.2672811059908, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 27655; Mature: 27524
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSANQKKLLEVSDLSMRFGGLLAVNGVKLDVDKGEVISIIGPNGAGKTTGFYRPSGGTIR CCCCHHHHEEHHHHHHHHCCEEEECCEEEECCCCCEEEEECCCCCCCCCCEECCCCCEEE YKGEEIQGLPGHLIARKGIVRTFQHVRLFKEMTAVENLLVAQHRHLNTGFIAGLFKTAAF ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH RRAEQEGLEQAAFWLEKVGLKDLANRAAGNLAYGQQRRLEIARCMATRPDLLMLDEPAAG HHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCC LNPNETDELNDLIISLRDEFGVSVLLIEHDMKLVMGISNRIFVVNQGTPLAHGKPDEIRN CCCCCCHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCEEEEEECCCCCCCCCCHHHCC NPAVIKAYLGES CCCEEEEECCCC >Mature Secondary Structure SANQKKLLEVSDLSMRFGGLLAVNGVKLDVDKGEVISIIGPNGAGKTTGFYRPSGGTIR CCCHHHHEEHHHHHHHHCCEEEECCEEEECCCCCEEEEECCCCCCCCCCEECCCCCEEE YKGEEIQGLPGHLIARKGIVRTFQHVRLFKEMTAVENLLVAQHRHLNTGFIAGLFKTAAF ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH RRAEQEGLEQAAFWLEKVGLKDLANRAAGNLAYGQQRRLEIARCMATRPDLLMLDEPAAG HHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCC LNPNETDELNDLIISLRDEFGVSVLLIEHDMKLVMGISNRIFVVNQGTPLAHGKPDEIRN CCCCCCHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCEEEEEECCCCCCCCCCHHHCC NPAVIKAYLGES CCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043 [H]