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The map label for this gene is yrdA [H]

Identifier: 145301030

GI number: 145301030

Start: 4488251

End: 4488790

Strand: Direct

Name: yrdA [H]

Synonym: ASA_4193

Alternate gene names: 145301030

Gene position: 4488251-4488790 (Clockwise)

Preceding gene: 145301028

Following gene: 145301032

Centisome position: 95.45

GC content: 58.7

Gene sequence:

>540_bases
ATGGACTTGCGACTGAGACCTTACAAAGGAAAACGCCCACAACTGGGTAAACGAGTATATGTGGATCCCTGCGCGACTCT
GGTGGGGGATATAGATCTGGCGGAGGATGCCAGCATCTGGCCCATGGTGGCGGCGCGGGGGGATGTGAATCATATCCGCA
TCGGTGCCCGCAGCAATATTCAGGACGGCACCGTGTTGCACCTTACCCGCAAGAGCGCCAGCAACCCTGACGGCTATCCG
CTGTTGATCGGAGAGGATGTGACGATCGGCCACAAGGCCATGCTGCACGGCTGCACCATAGGCGACCGGGTGCTGGTCGG
CATGGGAGCCATCATCCTGGATGGGGTTGTGGTGGAAGATGACGTGATGATCGGGGCCGGCAGTCTGGTGCCACCAGGCA
AGCGACTCGAATCCGGATTCCTCTATATGGGCAACCCCGTCAAGCAGGTCCGCCCGCTCAAACCTGCCGAGGTCGTATTT
CTCAAGACCTCGGCCGACAACTATGTCCTGCTCAAGGACGAGTATCTGCAAGAGGTTTGA

Upstream 100 bases:

>100_bases
CATCTTTTTAGTTATTCATAACCAGCCACAGCTTTTGTACAAACTTATCCACAGAAACGGGTTCCGGATTGCTAGAATGG
CCAAAAACAAGGAGGCCAAG

Downstream 100 bases:

>100_bases
GCAGACCCCACAAACAGGAAGCCCGGCATGATGCCGGGCTTCTCTTCTTATATAGCTATCTATATAGCAAAAGAGTGCCG
AAAGTTAATGGGCCTGATCC

Product: carbonic anhydrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MDLRLRPYKGKRPQLGKRVYVDPCATLVGDIDLAEDASIWPMVAARGDVNHIRIGARSNIQDGTVLHLTRKSASNPDGYP
LLIGEDVTIGHKAMLHGCTIGDRVLVGMGAIILDGVVVEDDVMIGAGSLVPPGKRLESGFLYMGNPVKQVRPLKPAEVVF
LKTSADNYVLLKDEYLQEV

Sequences:

>Translated_179_residues
MDLRLRPYKGKRPQLGKRVYVDPCATLVGDIDLAEDASIWPMVAARGDVNHIRIGARSNIQDGTVLHLTRKSASNPDGYP
LLIGEDVTIGHKAMLHGCTIGDRVLVGMGAIILDGVVVEDDVMIGAGSLVPPGKRLESGFLYMGNPVKQVRPLKPAEVVF
LKTSADNYVLLKDEYLQEV
>Mature_179_residues
MDLRLRPYKGKRPQLGKRVYVDPCATLVGDIDLAEDASIWPMVAARGDVNHIRIGARSNIQDGTVLHLTRKSASNPDGYP
LLIGEDVTIGHKAMLHGCTIGDRVLVGMGAIILDGVVVEDDVMIGAGSLVPPGKRLESGFLYMGNPVKQVRPLKPAEVVF
LKTSADNYVLLKDEYLQEV

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=174, Percent_Identity=64.9425287356322, Blast_Score=244, Evalue=3e-66,
Organism=Escherichia coli, GI1787667, Length=165, Percent_Identity=33.3333333333333, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI87081681, Length=164, Percent_Identity=34.1463414634146, Blast_Score=98, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19445; Mature: 19445

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLRLRPYKGKRPQLGKRVYVDPCATLVGDIDLAEDASIWPMVAARGDVNHIRIGARSNI
CCCEECCCCCCCCCCCCEEEECCHHHHHCCCCCCCCCCCCEEEECCCCCCEEEECCCCCC
QDGTVLHLTRKSASNPDGYPLLIGEDVTIGHKAMLHGCTIGDRVLVGMGAIILDGVVVED
CCCEEEEEEECCCCCCCCCEEEEECCCCCCCHHEEECCCCCCCHHHHCCHHHHCCEEEEC
DVMIGAGSLVPPGKRLESGFLYMGNPVKQVRPLKPAEVVFLKTSADNYVLLKDEYLQEV
CEEEECCCCCCCCCCCCCCEEEECCCHHHHCCCCCCEEEEEEECCCCEEEEEHHHHHCC
>Mature Secondary Structure
MDLRLRPYKGKRPQLGKRVYVDPCATLVGDIDLAEDASIWPMVAARGDVNHIRIGARSNI
CCCEECCCCCCCCCCCCEEEECCHHHHHCCCCCCCCCCCCEEEECCCCCCEEEECCCCCC
QDGTVLHLTRKSASNPDGYPLLIGEDVTIGHKAMLHGCTIGDRVLVGMGAIILDGVVVED
CCCEEEEEEECCCCCCCCCEEEEECCCCCCCHHEEECCCCCCCHHHHCCHHHHCCEEEEC
DVMIGAGSLVPPGKRLESGFLYMGNPVKQVRPLKPAEVVFLKTSADNYVLLKDEYLQEV
CEEEECCCCCCCCCCCCCCEEEECCCHHHHCCCCCCEEEEEEECCCCEEEEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]