| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145300937
Identifier: 145300937
GI number: 145300937
Start: 4378671
End: 4379585
Strand: Direct
Name: 145300937
Synonym: ASA_4089
Alternate gene names: NA
Gene position: 4378671-4379585 (Clockwise)
Preceding gene: 145300908
Following gene: 145300940
Centisome position: 93.12
GC content: 58.47
Gene sequence:
>915_bases ATGCTCAAAGATCAAAAAAAAGCCTATCAGTATGGACTCTGCGCCGTTGCCCTCTGGTCGACAGTCGCCACCGCCTTCAA GATCTCCCTCACCTACTTTGAACCGGTGCAATTGCTGCTTGTAGCCGCCTTCACCTCGACCCTCACGCTGACGGCGATAG TCGCCAAACAGGGTAAACTGCCGCTGCTACGGAGTTACATCAAGGCCCGACCTTTCTATTACCTGACCCTGGGTGTGCTG AACCCCTTCCTCTATTACCTGCTGCTGTTCAAAGCCTATGATCTGCTGCCCGCCCAGCAGGCACAGACCCTCAACTACAC CTGGGCCATCACCCTCAGTCTTCTGGCAGTCCCCTTTCTCGGCCAGAAACTGCGCCGCCGCGATGGAGTGGCCATAGTGC TGGGCTACTTCGGTGCCCTGGTGATCGCCACCAAGGGGGATGTGTTCGGCCTGCAATTCGACAGCCCGCTCGGGGTCGCG CTGGCGCTGGTATCGACGCTTATCTGGGCCAGTTACTGGATCCTCAACACCCGCAATCAGGGAGACCCTATCGTCAGCCT GTTGCTCGGCTTTATCATCAGCCTTCCTTTCATTGTCGCGGCGACCTGGCTGCTCTCCGATTTCGCCATGACAGCCTGGC AAGGCTGGGTCGGCGCCATCTATGTGGGCCTGTTCGAGATGGGCTTCGGTTTCGTGCTCTGGCTGATGGCTTTGCGCCAT GCCACCAACACGGCCCCTATAAGCAACCTCATCTTCATCTCGCCGTTTGCCTCCCTGGTGCTGCTCAACCTGTTGATCGG CGAGACAATACACCCGGCAACCCCCATAGGGCTGGGGCTGATCGTCGCCGCCTTGCTGATCCAGCAGCTGAAATATGGCA AGCGCTATCGCAAGGGAGCAGAGCCGCAAGCCTGA
Upstream 100 bases:
>100_bases CCGACGACACCTCACCCCCCCTTGCCAACTCGGGGTAACGACAATGTTACAAACAGGCTGGTAGACTGTGCGCCTGCCTC TGTCAGTGGAACGACATCCA
Downstream 100 bases:
>100_bases TAATGCAAAAGGGCGTATCCACGGATACGCCCTTTTCTCAATCCATCCACTCCAGTGGCTGGTTCTTGGGAAGCCGGACC TCGACCAACAAGCCCCCCAG
Product: drug/metabolite exporter family protein
Products: NA
Alternate protein names: Integral Membrane Domain-Containing Protein; Transporter Drug/Metabolite Exporter Family; DMT Family Permease; Drug/Metabolite Exporter Family Protein; Drug/Metabolite Transporter Permease; Permease DMT Superfamily; Permease Outative; DMT Superfamily Permease; Drug/Metabolite Transporter Superfamily Permease
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MLKDQKKAYQYGLCAVALWSTVATAFKISLTYFEPVQLLLVAAFTSTLTLTAIVAKQGKLPLLRSYIKARPFYYLTLGVL NPFLYYLLLFKAYDLLPAQQAQTLNYTWAITLSLLAVPFLGQKLRRRDGVAIVLGYFGALVIATKGDVFGLQFDSPLGVA LALVSTLIWASYWILNTRNQGDPIVSLLLGFIISLPFIVAATWLLSDFAMTAWQGWVGAIYVGLFEMGFGFVLWLMALRH ATNTAPISNLIFISPFASLVLLNLLIGETIHPATPIGLGLIVAALLIQQLKYGKRYRKGAEPQA
Sequences:
>Translated_304_residues MLKDQKKAYQYGLCAVALWSTVATAFKISLTYFEPVQLLLVAAFTSTLTLTAIVAKQGKLPLLRSYIKARPFYYLTLGVL NPFLYYLLLFKAYDLLPAQQAQTLNYTWAITLSLLAVPFLGQKLRRRDGVAIVLGYFGALVIATKGDVFGLQFDSPLGVA LALVSTLIWASYWILNTRNQGDPIVSLLLGFIISLPFIVAATWLLSDFAMTAWQGWVGAIYVGLFEMGFGFVLWLMALRH ATNTAPISNLIFISPFASLVLLNLLIGETIHPATPIGLGLIVAALLIQQLKYGKRYRKGAEPQA >Mature_304_residues MLKDQKKAYQYGLCAVALWSTVATAFKISLTYFEPVQLLLVAAFTSTLTLTAIVAKQGKLPLLRSYIKARPFYYLTLGVL NPFLYYLLLFKAYDLLPAQQAQTLNYTWAITLSLLAVPFLGQKLRRRDGVAIVLGYFGALVIATKGDVFGLQFDSPLGVA LALVSTLIWASYWILNTRNQGDPIVSLLLGFIISLPFIVAATWLLSDFAMTAWQGWVGAIYVGLFEMGFGFVLWLMALRH ATNTAPISNLIFISPFASLVLLNLLIGETIHPATPIGLGLIVAALLIQQLKYGKRYRKGAEPQA
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33533; Mature: 33533
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKDQKKAYQYGLCAVALWSTVATAFKISLTYFEPVQLLLVAAFTSTLTLTAIVAKQGKL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PLLRSYIKARPFYYLTLGVLNPFLYYLLLFKAYDLLPAQQAQTLNYTWAITLSLLAVPFL HHHHHHHHHCCHHEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHH GQKLRRRDGVAIVLGYFGALVIATKGDVFGLQFDSPLGVALALVSTLIWASYWILNTRNQ HHHHHHCCCCEEEHHHHHHEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHEECCCC GDPIVSLLLGFIISLPFIVAATWLLSDFAMTAWQGWVGAIYVGLFEMGFGFVLWLMALRH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATNTAPISNLIFISPFASLVLLNLLIGETIHPATPIGLGLIVAALLIQQLKYGKRYRKGA CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC EPQA CCCC >Mature Secondary Structure MLKDQKKAYQYGLCAVALWSTVATAFKISLTYFEPVQLLLVAAFTSTLTLTAIVAKQGKL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PLLRSYIKARPFYYLTLGVLNPFLYYLLLFKAYDLLPAQQAQTLNYTWAITLSLLAVPFL HHHHHHHHHCCHHEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHH GQKLRRRDGVAIVLGYFGALVIATKGDVFGLQFDSPLGVALALVSTLIWASYWILNTRNQ HHHHHHCCCCEEEHHHHHHEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHEECCCC GDPIVSLLLGFIISLPFIVAATWLLSDFAMTAWQGWVGAIYVGLFEMGFGFVLWLMALRH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATNTAPISNLIFISPFASLVLLNLLIGETIHPATPIGLGLIVAALLIQQLKYGKRYRKGA CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC EPQA CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA