| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145300881
Identifier: 145300881
GI number: 145300881
Start: 4327896
End: 4328660
Strand: Direct
Name: 145300881
Synonym: ASA_4027
Alternate gene names: NA
Gene position: 4327896-4328660 (Clockwise)
Preceding gene: 145300873
Following gene: 145300883
Centisome position: 92.04
GC content: 59.35
Gene sequence:
>765_bases ATGACCTATAGCCAGACCCTGGCCAACCACATTCTCGACACCCTGAAGAAGACCCTGACCGACAAGGGGATCCGCTATCA GACCCTGGCAGAAGCCATGGGCGTCTCCATCGCCACCGTCAAACGCATGATGAACAAGCCCTCCCTGCCGTTCGATACCC TGCTGGAAATCTGCCACCTGGTGGGACTCTCGTTCGAGGAGCTGCTGGACCGTACCCAGGATGCCCAGAGCCGCCGGGCC GTCTTCACCCAGGAGCAGGACGAGGCGTTTCACAAGGAGCCGGGGCTTTATGCCTTTCTCGCCAACATCTTCTGGCGCGA CAAGACCCTGATCGATCTCAAGCGGGAGTACAGCCTGACCGATGCCTCCTGCTACCTCTACCTGCGCAAACTGGAGAAGC TCGGCATCTTGCAGCTCGGCATCGACAACAGCTACCACTTCCTCATCAGCGAGCGCATCAGCTTCGAGCAGCACAGTCGC TTCGCCCGCCAGCAGGCGCGCCAGGCCATGTCGGTGCTGGGGGACTATCTGGTGGAGAACATGCACAAGTCCAACAACTA TATGGCGCTGTGCCAGCTTCATCTGGACGAGAGCGAGGCCATGGCGCTGATCGAGCGAATGAAGGAGTACTGGCATCAGG AGCTCAAGCTCAACCGCCCCGCCATCGGCCAGCGGGAGGGCAGCAAGACCTATACAATGTCGCTGCAGCTGGCGGACTGC GGTTATCAGAGCTTCGACGATCTGATCCCCAATATCGACAATTGA
Upstream 100 bases:
>100_bases TATTTCCTCTGGTTTTTTTAAGTGTCAATATCTGAGCCCATAACCAAAAAAGAACTCAGTTTCTGACACAACATAAAGAT GCAGATAAAGGAATAGTTGC
Downstream 100 bases:
>100_bases TCCCGGCGGATCCTGCGGGATCCGTCTGATTTGATCAGCTTGATAGCGGCAATTCAGACCCTCTTGCTGCCATCGGATGC AGCGCCCGGGTGTCCAGATG
Product: hypothetical protein
Products: NA
Alternate protein names: XRE Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MTYSQTLANHILDTLKKTLTDKGIRYQTLAEAMGVSIATVKRMMNKPSLPFDTLLEICHLVGLSFEELLDRTQDAQSRRA VFTQEQDEAFHKEPGLYAFLANIFWRDKTLIDLKREYSLTDASCYLYLRKLEKLGILQLGIDNSYHFLISERISFEQHSR FARQQARQAMSVLGDYLVENMHKSNNYMALCQLHLDESEAMALIERMKEYWHQELKLNRPAIGQREGSKTYTMSLQLADC GYQSFDDLIPNIDN
Sequences:
>Translated_254_residues MTYSQTLANHILDTLKKTLTDKGIRYQTLAEAMGVSIATVKRMMNKPSLPFDTLLEICHLVGLSFEELLDRTQDAQSRRA VFTQEQDEAFHKEPGLYAFLANIFWRDKTLIDLKREYSLTDASCYLYLRKLEKLGILQLGIDNSYHFLISERISFEQHSR FARQQARQAMSVLGDYLVENMHKSNNYMALCQLHLDESEAMALIERMKEYWHQELKLNRPAIGQREGSKTYTMSLQLADC GYQSFDDLIPNIDN >Mature_253_residues TYSQTLANHILDTLKKTLTDKGIRYQTLAEAMGVSIATVKRMMNKPSLPFDTLLEICHLVGLSFEELLDRTQDAQSRRAV FTQEQDEAFHKEPGLYAFLANIFWRDKTLIDLKREYSLTDASCYLYLRKLEKLGILQLGIDNSYHFLISERISFEQHSRF ARQQARQAMSVLGDYLVENMHKSNNYMALCQLHLDESEAMALIERMKEYWHQELKLNRPAIGQREGSKTYTMSLQLADCG YQSFDDLIPNIDN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29507; Mature: 29376
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYSQTLANHILDTLKKTLTDKGIRYQTLAEAMGVSIATVKRMMNKPSLPFDTLLEICHL CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHH VGLSFEELLDRTQDAQSRRAVFTQEQDEAFHKEPGLYAFLANIFWRDKTLIDLKREYSLT HCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHCCCC DASCYLYLRKLEKLGILQLGIDNSYHFLISERISFEQHSRFARQQARQAMSVLGDYLVEN HHHHHHHHHHHHHCCEEEEECCCCEEEHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH MHKSNNYMALCQLHLDESEAMALIERMKEYWHQELKLNRPAIGQREGSKTYTMSLQLADC HHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCC GYQSFDDLIPNIDN CCHHHHHHCCCCCC >Mature Secondary Structure TYSQTLANHILDTLKKTLTDKGIRYQTLAEAMGVSIATVKRMMNKPSLPFDTLLEICHL CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHH VGLSFEELLDRTQDAQSRRAVFTQEQDEAFHKEPGLYAFLANIFWRDKTLIDLKREYSLT HCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHCCCC DASCYLYLRKLEKLGILQLGIDNSYHFLISERISFEQHSRFARQQARQAMSVLGDYLVEN HHHHHHHHHHHHHCCEEEEECCCCEEEHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH MHKSNNYMALCQLHLDESEAMALIERMKEYWHQELKLNRPAIGQREGSKTYTMSLQLADC HHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCC GYQSFDDLIPNIDN CCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA