Definition Aeromonas salmonicida subsp. salmonicida A449, complete genome.
Accession NC_009348
Length 4,702,402

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The map label for this gene is 145300846

Identifier: 145300846

GI number: 145300846

Start: 4284088

End: 4285074

Strand: Direct

Name: 145300846

Synonym: ASA_3989

Alternate gene names: NA

Gene position: 4284088-4285074 (Clockwise)

Preceding gene: 145300845

Following gene: 145300851

Centisome position: 91.1

GC content: 58.46

Gene sequence:

>987_bases
ATGAGTAAGAAGCTGTTACGACAACTGACCTTGGCGCGTTGCATCCCGCACCGCCCTTACAAGCTGACCGCCAGCCAACT
TCAGGTAAAACTGGAAGAGGAAGGTATCCATGTCAGTCTGCGTACCGTGCAACGGGACCTGGAAGAGATGTCCGGCATGG
GGTTGTTCGACCTCACCTCGGATGAGCGCAGCAAACCCCACGGCTGGTGCTTTGAGCGCCATGGCCTCAACGACTTCGCC
AATATCATGCCGTTGTCGCTGGCGGTGGCCCTGAAAACATGGAGTGATCAGGCAAGCCAACTGCTACCGGCAAGCGTGCT
GACCGAATTGAATCCGCTGATCGACAAGGCCAGCCAGGTGATTCGCGACAGCCAGAGCGAACTGGCCGAACGCTGGCTCG
AGAGCGTACATCAGTCACCGCGTCCGTTTGCCGGCAACCCGGAGATCCGTCGCAGCACCCTGATCCGCGATGCCCTCTGG
CGTGGTCGCAAGTTCAGCGCCGAGATACAGCGCGTCATCAAGGAGCGTACTGTATGGCTCTGCTATGACCGCATCAATCC
GCTCGGCATCCTGAATCAGGCCGATGGTCCGACCCTGCTCTGTACTTTGTCCGAGCTGGATCCCAAGGTATACGGCATCC
CGTTCGATCACATCAAGGGCGTGGAACTGACCAACTTCAGCGCAACCCAGCCGAAGGATTTCAATATCCAGAAGCTGATC
CGTGACCAGGGCTACCAGGACGTCAGCGGTCCAATCCGCTTTGTCGGTCGCATTGATGCAAACTGCCCGACCCTGGTTGA
TGGCCAGATCCCGGGCCACAACCCACGCATGACTCGCTATGACAAGCGCAGTGTCGTGGTGGAGACCGAAGTCCAGGACA
CCCCTGAATTTCGCACCTGGCTCAATAACATGAGCGGCAACCTGGAAGTGCTGGCGCCAGAGTCACTGCGCAAGGCATAC
CCGACACCAGGCAGCCGGGTTAGCTAA

Upstream 100 bases:

>100_bases
TATGAAAATGGCGACAGTTGTCGCAGCAAAACTTGCGACATAGACTGTCGCATGCCATGGCTAGGATACACTCAACGCTA
AACCAGTGAAGGCATGCACC

Downstream 100 bases:

>100_bases
TCCCAAAAAGCCGAGCTCAGCCTCGGCTTTTTGTATTCTTTTCAAGCATATCTATTCAACTAATTTTGAACCCTTGCCTG
CTGAATTGAGTGGTTTTGTA

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Factor; Transcriptional Factor MdcH

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MSKKLLRQLTLARCIPHRPYKLTASQLQVKLEEEGIHVSLRTVQRDLEEMSGMGLFDLTSDERSKPHGWCFERHGLNDFA
NIMPLSLAVALKTWSDQASQLLPASVLTELNPLIDKASQVIRDSQSELAERWLESVHQSPRPFAGNPEIRRSTLIRDALW
RGRKFSAEIQRVIKERTVWLCYDRINPLGILNQADGPTLLCTLSELDPKVYGIPFDHIKGVELTNFSATQPKDFNIQKLI
RDQGYQDVSGPIRFVGRIDANCPTLVDGQIPGHNPRMTRYDKRSVVVETEVQDTPEFRTWLNNMSGNLEVLAPESLRKAY
PTPGSRVS

Sequences:

>Translated_328_residues
MSKKLLRQLTLARCIPHRPYKLTASQLQVKLEEEGIHVSLRTVQRDLEEMSGMGLFDLTSDERSKPHGWCFERHGLNDFA
NIMPLSLAVALKTWSDQASQLLPASVLTELNPLIDKASQVIRDSQSELAERWLESVHQSPRPFAGNPEIRRSTLIRDALW
RGRKFSAEIQRVIKERTVWLCYDRINPLGILNQADGPTLLCTLSELDPKVYGIPFDHIKGVELTNFSATQPKDFNIQKLI
RDQGYQDVSGPIRFVGRIDANCPTLVDGQIPGHNPRMTRYDKRSVVVETEVQDTPEFRTWLNNMSGNLEVLAPESLRKAY
PTPGSRVS
>Mature_327_residues
SKKLLRQLTLARCIPHRPYKLTASQLQVKLEEEGIHVSLRTVQRDLEEMSGMGLFDLTSDERSKPHGWCFERHGLNDFAN
IMPLSLAVALKTWSDQASQLLPASVLTELNPLIDKASQVIRDSQSELAERWLESVHQSPRPFAGNPEIRRSTLIRDALWR
GRKFSAEIQRVIKERTVWLCYDRINPLGILNQADGPTLLCTLSELDPKVYGIPFDHIKGVELTNFSATQPKDFNIQKLIR
DQGYQDVSGPIRFVGRIDANCPTLVDGQIPGHNPRMTRYDKRSVVVETEVQDTPEFRTWLNNMSGNLEVLAPESLRKAYP
TPGSRVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37237; Mature: 37106

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKLLRQLTLARCIPHRPYKLTASQLQVKLEEEGIHVSLRTVQRDLEEMSGMGLFDLTS
CCHHHHHHHHHHHHCCCCCCEEEHHHHEEEEECCCCEEEHHHHHHHHHHHCCCCEEEECC
DERSKPHGWCFERHGLNDFANIMPLSLAVALKTWSDQASQLLPASVLTELNPLIDKASQV
CCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRDSQSELAERWLESVHQSPRPFAGNPEIRRSTLIRDALWRGRKFSAEIQRVIKERTVWL
HHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEE
CYDRINPLGILNQADGPTLLCTLSELDPKVYGIPFDHIKGVELTNFSATQPKDFNIQKLI
EECCCCCCEEEECCCCCEEEEEHHHCCCEEECCCHHHCCCCEECCCCCCCCCCCCHHHHH
RDQGYQDVSGPIRFVGRIDANCPTLVDGQIPGHNPRMTRYDKRSVVVETEVQDTPEFRTW
HHCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCEECCCEEEEEECCCCCHHHHHH
LNNMSGNLEVLAPESLRKAYPTPGSRVS
HHCCCCCEEEECCHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SKKLLRQLTLARCIPHRPYKLTASQLQVKLEEEGIHVSLRTVQRDLEEMSGMGLFDLTS
CHHHHHHHHHHHHCCCCCCEEEHHHHEEEEECCCCEEEHHHHHHHHHHHCCCCEEEECC
DERSKPHGWCFERHGLNDFANIMPLSLAVALKTWSDQASQLLPASVLTELNPLIDKASQV
CCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRDSQSELAERWLESVHQSPRPFAGNPEIRRSTLIRDALWRGRKFSAEIQRVIKERTVWL
HHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEE
CYDRINPLGILNQADGPTLLCTLSELDPKVYGIPFDHIKGVELTNFSATQPKDFNIQKLI
EECCCCCCEEEECCCCCEEEEEHHHCCCEEECCCHHHCCCCEECCCCCCCCCCCCHHHHH
RDQGYQDVSGPIRFVGRIDANCPTLVDGQIPGHNPRMTRYDKRSVVVETEVQDTPEFRTW
HHCCCCCCCCCEEEEEEECCCCCEEECCCCCCCCCCCCEECCCEEEEEECCCCCHHHHHH
LNNMSGNLEVLAPESLRKAYPTPGSRVS
HHCCCCCEEEECCHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA