Definition Aeromonas salmonicida subsp. salmonicida A449, complete genome.
Accession NC_009348
Length 4,702,402

Click here to switch to the map view.

The map label for this gene is 145300690

Identifier: 145300690

GI number: 145300690

Start: 4120047

End: 4121090

Strand: Direct

Name: 145300690

Synonym: ASA_3828

Alternate gene names: NA

Gene position: 4120047-4121090 (Clockwise)

Preceding gene: 145300688

Following gene: 145300691

Centisome position: 87.62

GC content: 48.37

Gene sequence:

>1044_bases
ATGGGTAATGCGGCTAAGGTCGGAGATATTGGAACCGACCATGACGGGTTTCCACCGACCAAGATTATCTCCGGCTCGTC
AGATGTATTTATTGATGGTCTTCCTGCTGCTCGACTCGGTGATCCGCTTGAACCTCATGACAAACCCAATAACCCACCAC
ATCCCAGGTTTATCGCTGCGGGCTCTTCAACCGTCTTTGTTAATGGTCAGCCACTCGCGTTCACAGGGAAGGGGGTTTCT
TGTGGTGGTGTAATCATTGGTGGGGGAACTGTCACGGTTGGCGATGGAGCTCCATCTGCCCGTGCAGCTGCGATTGCTCC
AGCCCCTAGCCCAGTGGAAATTCCCGCATCATCACCCGGTTTTTGGCCTCCTTATAACCCCCTGACTGGTGAGTACCTTG
ATGTCGTTTATACACAGGCGGCACAAACCGTTGCTGTGCTGACATTTGAAGAGCTCCAGGAGCTTTGGAAGGAGCTCAAC
GCCAAAGGCAACTTGGGGGATGCAAAATCTATCAAAGATGCAGGGGAACGAATTCGGCTCGCTCAATCTACCGCTAAAGC
ATTAGGTGGTATGGGGGTAATTGCTTACACCAAAGTTATCAACGGCGAGCCCTATACGATCATCAAGAACTACAAGCAGG
TTCACAAAACGATCCCAGGTAATATCTGGAAGGCCAGCAATCCCAAGATTCTTAGGTTGGGTATAGGTGCAAAGGCAAAT
ACCCACTTGGTAAAGATGGGGTTCTTGGCTGATTTTGTCTTTTCTGTATCTATCAACGTTATTGATTACATCTTGAAAGA
TGAAGTCACGATGGTCGACCTTTTCAGTAATGTAGGTGTCGATCTTGTTAAAGGTACGCTTGCCAATGGTGTAGGCATCA
TTGCAGCAGGTGTTGTAGCTACAGTCTTTGGGCCTGGGATACTGTTAACTGGGACAGTATTTGCTTTGGCAACGATTGTT
GCTGGTAAACTTATCGACTTTGCCGACGAAGAAGCAGAGCTCTCTGAGATGATGAAACAAGCGGTTAAGGCGAAATTTGA
ATGA

Upstream 100 bases:

>100_bases
TTTTGGGACTCGGTTCTTAACTTTCGGTTTAGAACTTTGACCAAGCTTCTAGTGGCTCCTTACAGTGTTCCGTTCTTGAA
TCACAGAATGGGGACACGCT

Downstream 100 bases:

>100_bases
CAAAGGTGCATGTCTCATGGCAGATGCGGGCCAGTGGATTGGTGGTCGCGTTACTCGGGACCGGTGGCGTTTGGATGGCC
ATGGTATTTGGTTCTGAATT

Product: hypothetical protein

Products: NA

Alternate protein names: Paar Repeat-Containing Protein; S-Type Pyocin Domain Protein; Paar Domain-Containing Protein; PAAR Motif-Containing Protein

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MGNAAKVGDIGTDHDGFPPTKIISGSSDVFIDGLPAARLGDPLEPHDKPNNPPHPRFIAAGSSTVFVNGQPLAFTGKGVS
CGGVIIGGGTVTVGDGAPSARAAAIAPAPSPVEIPASSPGFWPPYNPLTGEYLDVVYTQAAQTVAVLTFEELQELWKELN
AKGNLGDAKSIKDAGERIRLAQSTAKALGGMGVIAYTKVINGEPYTIIKNYKQVHKTIPGNIWKASNPKILRLGIGAKAN
THLVKMGFLADFVFSVSINVIDYILKDEVTMVDLFSNVGVDLVKGTLANGVGIIAAGVVATVFGPGILLTGTVFALATIV
AGKLIDFADEEAELSEMMKQAVKAKFE

Sequences:

>Translated_347_residues
MGNAAKVGDIGTDHDGFPPTKIISGSSDVFIDGLPAARLGDPLEPHDKPNNPPHPRFIAAGSSTVFVNGQPLAFTGKGVS
CGGVIIGGGTVTVGDGAPSARAAAIAPAPSPVEIPASSPGFWPPYNPLTGEYLDVVYTQAAQTVAVLTFEELQELWKELN
AKGNLGDAKSIKDAGERIRLAQSTAKALGGMGVIAYTKVINGEPYTIIKNYKQVHKTIPGNIWKASNPKILRLGIGAKAN
THLVKMGFLADFVFSVSINVIDYILKDEVTMVDLFSNVGVDLVKGTLANGVGIIAAGVVATVFGPGILLTGTVFALATIV
AGKLIDFADEEAELSEMMKQAVKAKFE
>Mature_346_residues
GNAAKVGDIGTDHDGFPPTKIISGSSDVFIDGLPAARLGDPLEPHDKPNNPPHPRFIAAGSSTVFVNGQPLAFTGKGVSC
GGVIIGGGTVTVGDGAPSARAAAIAPAPSPVEIPASSPGFWPPYNPLTGEYLDVVYTQAAQTVAVLTFEELQELWKELNA
KGNLGDAKSIKDAGERIRLAQSTAKALGGMGVIAYTKVINGEPYTIIKNYKQVHKTIPGNIWKASNPKILRLGIGAKANT
HLVKMGFLADFVFSVSINVIDYILKDEVTMVDLFSNVGVDLVKGTLANGVGIIAAGVVATVFGPGILLTGTVFALATIVA
GKLIDFADEEAELSEMMKQAVKAKFE

Specific function: Unknown

COG id: COG4104

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36137; Mature: 36006

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNAAKVGDIGTDHDGFPPTKIISGSSDVFIDGLPAARLGDPLEPHDKPNNPPHPRFIAA
CCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCHHHCCCCCCCCCCCCCCCCCCEEEC
GSSTVFVNGQPLAFTGKGVSCGGVIIGGGTVTVGDGAPSARAAAIAPAPSPVEIPASSPG
CCCEEEECCCEEEEECCCCEECCEEECCCEEEECCCCCCCCEEEECCCCCCCCCCCCCCC
FWPPYNPLTGEYLDVVYTQAAQTVAVLTFEELQELWKELNAKGNLGDAKSIKDAGERIRL
CCCCCCCCCCHHHHHHHHHHHHEEEEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
AQSTAKALGGMGVIAYTKVINGEPYTIIKNYKQVHKTIPGNIWKASNPKILRLGIGAKAN
HHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEECCCCCEEEEECCCCCC
THLVKMGFLADFVFSVSINVIDYILKDEVTMVDLFSNVGVDLVKGTLANGVGIIAAGVVA
CCEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHHHHCCHHHHHHHHHH
TVFGPGILLTGTVFALATIVAGKLIDFADEEAELSEMMKQAVKAKFE
HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GNAAKVGDIGTDHDGFPPTKIISGSSDVFIDGLPAARLGDPLEPHDKPNNPPHPRFIAA
CCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCHHHCCCCCCCCCCCCCCCCCCEEEC
GSSTVFVNGQPLAFTGKGVSCGGVIIGGGTVTVGDGAPSARAAAIAPAPSPVEIPASSPG
CCCEEEECCCEEEEECCCCEECCEEECCCEEEECCCCCCCCEEEECCCCCCCCCCCCCCC
FWPPYNPLTGEYLDVVYTQAAQTVAVLTFEELQELWKELNAKGNLGDAKSIKDAGERIRL
CCCCCCCCCCHHHHHHHHHHHHEEEEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
AQSTAKALGGMGVIAYTKVINGEPYTIIKNYKQVHKTIPGNIWKASNPKILRLGIGAKAN
HHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCCCEEECCCCCEEEEECCCCCC
THLVKMGFLADFVFSVSINVIDYILKDEVTMVDLFSNVGVDLVKGTLANGVGIIAAGVVA
CCEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHHHHCCHHHHHHHHHH
TVFGPGILLTGTVFALATIVAGKLIDFADEEAELSEMMKQAVKAKFE
HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA