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The map label for this gene is ygaD [H]

Identifier: 145300675

GI number: 145300675

Start: 4100134

End: 4100625

Strand: Direct

Name: ygaD [H]

Synonym: ASA_3808

Alternate gene names: 145300675

Gene position: 4100134-4100625 (Clockwise)

Preceding gene: 145300673

Following gene: 145300676

Centisome position: 87.19

GC content: 65.85

Gene sequence:

>492_bases
ATGAAACTGGACGCAGAGATAGAGCACCTCGCCACCGAACTGGGCAAGGCCCTGGGCCAGCGAGGCTGGCTGGCGGCTAC
CGCCGAATCCTGTACCGGCGGTGGCGTGGCAACGGCCATCACCGACATTGCCGGCAGCTCTGGCTGGTTCGATCGCGGCT
TCGTCACCTATACCAACCAGGCCAAGCAGCAGATGCTGGGGGTGAGCGGCGAGAGTCTTCAGCAGCACGGGGCCGTAAGC
GAGGCTGTGGTGCTGGAGATGGCCCGTGGCGCGTTGGCCCACTCGTCGGCCGCCATCAGCGTGGCCATCAGCGGTATCGC
AGGCCCGGGTGGTGCAACCGAAGACAAACCTGTCGGTACCGTCTGGTTCGCCTGGGCCGACAGCAACGGCCGTCACCACT
CCCTGCTGGCCCGTTTCGACGGTGACCGGCGTCAGGTACGCCAGCAGGCGGTCAGACAGGCCTTGTCCGGACTCTTGGCC
CTGCTCAGATAA

Upstream 100 bases:

>100_bases
CCGTGCTGAGACGGGCAAGGCGGGCTTCTGCCCTGCTCCGGTTGCGGGGGATGGCAGCAGGATCGCATAATGAGCCTCCT
CAACGAGCTAGGGAGCCGGG

Downstream 100 bases:

>100_bases
ATTGGGCTTGATACTGTATGAATAGACAGTATACTTAGCCCAACTTCACTTATTACTCACGATTTCCAGCGGAGATTGGC
ATGGATCAGAACAAACAGAA

Product: CinA-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MKLDAEIEHLATELGKALGQRGWLAATAESCTGGGVATAITDIAGSSGWFDRGFVTYTNQAKQQMLGVSGESLQQHGAVS
EAVVLEMARGALAHSSAAISVAISGIAGPGGATEDKPVGTVWFAWADSNGRHHSLLARFDGDRRQVRQQAVRQALSGLLA
LLR

Sequences:

>Translated_163_residues
MKLDAEIEHLATELGKALGQRGWLAATAESCTGGGVATAITDIAGSSGWFDRGFVTYTNQAKQQMLGVSGESLQQHGAVS
EAVVLEMARGALAHSSAAISVAISGIAGPGGATEDKPVGTVWFAWADSNGRHHSLLARFDGDRRQVRQQAVRQALSGLLA
LLR
>Mature_163_residues
MKLDAEIEHLATELGKALGQRGWLAATAESCTGGGVATAITDIAGSSGWFDRGFVTYTNQAKQQMLGVSGESLQQHGAVS
EAVVLEMARGALAHSSAAISVAISGIAGPGGATEDKPVGTVWFAWADSNGRHHSLLARFDGDRRQVRQQAVRQALSGLLA
LLR

Specific function: Unknown

COG id: COG1546

COG function: function code R; Uncharacterized protein (competence- and mitomycin-induced)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CinA family [H]

Homologues:

Organism=Escherichia coli, GI1789052, Length=155, Percent_Identity=58.7096774193548, Blast_Score=174, Evalue=4e-45,
Organism=Escherichia coli, GI1787818, Length=146, Percent_Identity=42.4657534246575, Blast_Score=113, Evalue=5e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008136 [H]

Pfam domain/function: PF02464 CinA [H]

EC number: NA

Molecular weight: Translated: 16982; Mature: 16982

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLDAEIEHLATELGKALGQRGWLAATAESCTGGGVATAITDIAGSSGWFDRGFVTYTNQ
CCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECHH
AKQQMLGVSGESLQQHGAVSEAVVLEMARGALAHSSAAISVAISGIAGPGGATEDKPVGT
HHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCE
VWFAWADSNGRHHSLLARFDGDRRQVRQQAVRQALSGLLALLR
EEEEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKLDAEIEHLATELGKALGQRGWLAATAESCTGGGVATAITDIAGSSGWFDRGFVTYTNQ
CCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHCCCCCCCCCCEEEECHH
AKQQMLGVSGESLQQHGAVSEAVVLEMARGALAHSSAAISVAISGIAGPGGATEDKPVGT
HHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCE
VWFAWADSNGRHHSLLARFDGDRRQVRQQAVRQALSGLLALLR
EEEEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]