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The map label for this gene is asaR

Identifier: 145300631

GI number: 145300631

Start: 4055814

End: 4056596

Strand: Direct

Name: asaR

Synonym: ASA_3763

Alternate gene names: 145300631

Gene position: 4055814-4056596 (Clockwise)

Preceding gene: 145300619

Following gene: 145300632

Centisome position: 86.25

GC content: 56.83

Gene sequence:

>783_bases
ATGAAACAAGACCAACTGCTTGAGTACCTCGAACATTTCACTTCGGTAACAGACGGGGATCGTTTGGCCGAGTTGATCGG
TCGATTCACGCTCGGTATGGGCTATGACTACTACCGGTTCGCACTGATCATTCCCATGTCGATGCAAAGGCCCAAGGTGG
TGCTGTTCAATCAGTGCCCTGACTCCTGGGTGCAGGCCTATACGGCCAACCATATGCTGGCCTGTGATCCCATCATCCAG
CTGGCCCGCAAGCAGACCTTGCCCATTTATTGGAACCGACTGGATGAACGGGCGCGTTTTCTGCAAGAGGGCAGTCTGGA
TGTGATGGGGTTGGCGGCAGAGTTCGGGCTGCGAAACGGTATTTCGTTTCCGCTGCACGGTGCGGCGGGTGAAAACGGCA
TACTGTCGTTCATCACCGCCGAGCGGGCGTCAAGCGATCTGCTGCTGGAGTCCTCGCCCATCCTCTCCTGGATGTCCAAC
TACATCTTCGAGGCGGCGATCCGGATTGTGCGGGTCAGTCTGCGGGAAGATGACCCTCAGGAGGCCCTGACTGACCGTGA
GACCGAATGCCTGTTCTGGGCCAGCGAAGGGAAAACGTCGGGTGAAATTGCCTGCATCCTGGGGATCACGGAACGTACCG
TGAACTACCACCTCAATCAGGTCACCCGTAAAACGGGGTCGATGAATCGCTACCAGGCCATCGCCAAGGGGGTGAGCAGT
GGCATTTTGCTGCCCAATCTGGAGCAGGTCGTGGTCACCAACTTCCCCAAGCTGATGCAATAA

Upstream 100 bases:

>100_bases
CTGGGGTGTTCTTTTAATTTTCCTTTGAAAACAAGCATTCAGATGTCTCCATTTCAGTGTTCGGCGCTATAATCGAGGCC
CTGGCCAGGGGGGCTAGCAT

Downstream 100 bases:

>100_bases
AACCCAATGATTCTCGGGGCAGAGCGACAGGCTCACAATTGTCAGATCATGCAATTGACAGTTGGTGCCGGATGGAATTC
ATCCCTGCCCTCAGGATCCC

Product: transcriptional activator AsaR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MKQDQLLEYLEHFTSVTDGDRLAELIGRFTLGMGYDYYRFALIIPMSMQRPKVVLFNQCPDSWVQAYTANHMLACDPIIQ
LARKQTLPIYWNRLDERARFLQEGSLDVMGLAAEFGLRNGISFPLHGAAGENGILSFITAERASSDLLLESSPILSWMSN
YIFEAAIRIVRVSLREDDPQEALTDRETECLFWASEGKTSGEIACILGITERTVNYHLNQVTRKTGSMNRYQAIAKGVSS
GILLPNLEQVVVTNFPKLMQ

Sequences:

>Translated_260_residues
MKQDQLLEYLEHFTSVTDGDRLAELIGRFTLGMGYDYYRFALIIPMSMQRPKVVLFNQCPDSWVQAYTANHMLACDPIIQ
LARKQTLPIYWNRLDERARFLQEGSLDVMGLAAEFGLRNGISFPLHGAAGENGILSFITAERASSDLLLESSPILSWMSN
YIFEAAIRIVRVSLREDDPQEALTDRETECLFWASEGKTSGEIACILGITERTVNYHLNQVTRKTGSMNRYQAIAKGVSS
GILLPNLEQVVVTNFPKLMQ
>Mature_260_residues
MKQDQLLEYLEHFTSVTDGDRLAELIGRFTLGMGYDYYRFALIIPMSMQRPKVVLFNQCPDSWVQAYTANHMLACDPIIQ
LARKQTLPIYWNRLDERARFLQEGSLDVMGLAAEFGLRNGISFPLHGAAGENGILSFITAERASSDLLLESSPILSWMSN
YIFEAAIRIVRVSLREDDPQEALTDRETECLFWASEGKTSGEIACILGITERTVNYHLNQVTRKTGSMNRYQAIAKGVSS
GILLPNLEQVVVTNFPKLMQ

Specific function: Functions as a BHL-responsive transcriptional regulator

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain

Homologues:

Organism=Escherichia coli, GI1788224, Length=221, Percent_Identity=31.2217194570136, Blast_Score=96, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): AHYR_AERHY (P0A3J5)

Other databases:

- EMBL:   X89469
- PIR:   S57939
- ProteinModelPortal:   P0A3J5
- GO:   GO:0005622
- InterPro:   IPR016032
- InterPro:   IPR005143
- InterPro:   IPR000792
- InterPro:   IPR011991
- Gene3D:   G3DSA:3.30.450.80
- Gene3D:   G3DSA:1.10.10.10
- PRINTS:   PR00038
- SMART:   SM00421

Pfam domain/function: PF03472 Autoind_bind; PF00196 GerE; SSF46894 Bipartite_resp_reg_C-effector; SSF75516 TF_LuxR_autoind-bd_dom

EC number: NA

Molecular weight: Translated: 29350; Mature: 29350

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: PS00622 HTH_LUXR_1; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQDQLLEYLEHFTSVTDGDRLAELIGRFTLGMGYDYYRFALIIPMSMQRPKVVLFNQCP
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCEEEEECCC
DSWVQAYTANHMLACDPIIQLARKQTLPIYWNRLDERARFLQEGSLDVMGLAAEFGLRNG
HHHHHHHHCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCC
ISFPLHGAAGENGILSFITAERASSDLLLESSPILSWMSNYIFEAAIRIVRVSLREDDPQ
CCCCCCCCCCCCCEEEEEEHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHH
EALTDRETECLFWASEGKTSGEIACILGITERTVNYHLNQVTRKTGSMNRYQAIAKGVSS
HHHCCCCCEEEEEECCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
GILLPNLEQVVVTNFPKLMQ
CCCCCCHHHHHHHCCHHHCC
>Mature Secondary Structure
MKQDQLLEYLEHFTSVTDGDRLAELIGRFTLGMGYDYYRFALIIPMSMQRPKVVLFNQCP
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCEEEEECCC
DSWVQAYTANHMLACDPIIQLARKQTLPIYWNRLDERARFLQEGSLDVMGLAAEFGLRNG
HHHHHHHHCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCC
ISFPLHGAAGENGILSFITAERASSDLLLESSPILSWMSNYIFEAAIRIVRVSLREDDPQ
CCCCCCCCCCCCCEEEEEEHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCHH
EALTDRETECLFWASEGKTSGEIACILGITERTVNYHLNQVTRKTGSMNRYQAIAKGVSS
HHHCCCCCEEEEEECCCCCCCCEEEEEECHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
GILLPNLEQVVVTNFPKLMQ
CCCCCCHHHHHHHCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9286976