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The map label for this gene is sgrR [H]

Identifier: 145300582

GI number: 145300582

Start: 4002504

End: 4004180

Strand: Direct

Name: sgrR [H]

Synonym: ASA_3714

Alternate gene names: 145300582

Gene position: 4002504-4004180 (Clockwise)

Preceding gene: 145300578

Following gene: 145300583

Centisome position: 85.12

GC content: 66.31

Gene sequence:

>1677_bases
ATGCCGACCAGTCGCCTCTATCAGCAGTTTCAACGACTCGCCCAGCAGCTTGGCTGCGATGAGCGGGAGGCAAGTCTCGC
CGAAGTGGCGGACCTGCTCTGCTGCACCCCACGCAACGCCCGCCTGCTGCTGCGGCGGATGCAGGATCAGGGCTGGCTCA
GCTGGTCAGCCGAGGCGGGCAGGGGACGGCGCTCCCGGCTCACCCTGCTCGACAGCCAGGAGAGTCTGACCCGGCGCCGC
CTGCGGGATCTGTTGAGTCAGGGCCAGCTTGCCCAGGCGGTGCGGCTGGCGGAAGGTCGGCTGGATCTGCTCACCCCGCT
GCTGATCGAGCAGCTCGGCCAGGCCACCCGGGAGGGACGCCAGATCCTGCGGGTGCCCTACTACCGGCCGCTGCCCCAGC
TGCTGCCCACGGATCCGCTGCGTCGCTCCGAAATTCACCTGAGCCGGCAGATCTTCAACGGTCTCACCCGACGAAATGAG
GAAAATGGGGAAATCGAAGGGGATCTGGCCCACCACTGGGAGTGTCTGGGGCCCTGTCACTGGCGCTTCTATCTGAGGCC
GGTGGTGCGCTTTCACCACGGTCGCGAGCTGGTGGTAGAAGATGTGATGGAGAGTCTGCTGGCACTGCGGGATCGCCCCC
TGTTCGCCCATCTGGTTCGGCTGGAGAGCCCCTGGCCACGCACTCTGGATCTGTATCTCGACAGCCCGGATCCTCTGCTG
CCCCACCTGCTGGCCGAACCGGTGGCGACCATATTGCCGCGGGAGCTCAAGGGGGAGGCGGGCTTTGCCCTGCAGCCGGT
GGGCACGGGCCCCTACAAGGTGACCGCCAACGATCCCCTGCACCTTTGTCTGGAGGCGTTTGACGACTACTTTGGTCTGC
GTGCCTTGCTTGACGAGATCGACATCTGGATGCTGCCGGAGCTGGCGGAGCGGCTGGAGACCCACCTGCAGCTGGGACGT
GACAGCCCTGAACTCGGCACCATGCGCGGTGAATCCGAGCTTGAATCCGGCTGCTACTTCCTGCTGCAGGACGACAGATC
CGTCTCCTTGCAGGATCCTGCCCTGCGTCACTGGCTGGCCCAGCTGCTCAACCCCATCGCCCTGATGGCACGGGTCGCCC
CCGAGTTACAGCGGGGCTGGACCAGTGCGCTGGGTCTGTTGCCCCACTGGCGCGAGGCCCTGCCTGCGTCATTGCCAACG
CCGGAGCAACTGCCGACGCGGCTGGTGCTGGCCTGTTTCAATCAGCATCTGGAGTTCAACGAGTGTGCCGGCGCCATGGC
CAGCCTGCTGGCAGAACAGGGGATCCGGCTGGAGGTTCGCACCCTGGATTACGGCCGCTGGGTGAGCGGGGTGGATGAGG
ATGTGGATCTCTGGCTCGGCACCCTCAATCTGGAGCACGAGCATGCCTTCGCCCCCTACGCCTGGCTGCTAGGCACGCCG
CTGCTGCACAAGGTGTGGGCCAGTCAGCATGCTTTATGGCAGGGCCTGACCCGGTGGCGTGCCAGCGGTGAGGAGCCGGG
CCCGCGCGCTCTGCTGGCCCGGGTGCAGCAACAGGGCTGGTTCGTGCCCCTGTTCCACCACTGGCTGGAGCTGGAGAGCC
GGGTCGGCGTGCACGGGGTGCGCATGACGGCCCTCGGCTGGTTTGATTTTCGCAGTGCCTGGCTTCGCCCCGAGTAA

Upstream 100 bases:

>100_bases
GATGATGCTCCTGTGCTGTGGCTCTCATGTTCATCAGCAGTATTGAGCTAAAATGCGGAAGTAAAAACTGATGACTTATA
GCAACAGGATTTCCTCTTTT

Downstream 100 bases:

>100_bases
GGACGATGCTTATGAGGCGGGTTGAACCTGTCTCGCCTCACCTTGTACCTGCAAGGTGCTCTTCCGGCAGATCGTCATCC
TGTTTTAATTGCCGTTTTTA

Product: ABC-type transporter, periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 558; Mature: 557

Protein sequence:

>558_residues
MPTSRLYQQFQRLAQQLGCDEREASLAEVADLLCCTPRNARLLLRRMQDQGWLSWSAEAGRGRRSRLTLLDSQESLTRRR
LRDLLSQGQLAQAVRLAEGRLDLLTPLLIEQLGQATREGRQILRVPYYRPLPQLLPTDPLRRSEIHLSRQIFNGLTRRNE
ENGEIEGDLAHHWECLGPCHWRFYLRPVVRFHHGRELVVEDVMESLLALRDRPLFAHLVRLESPWPRTLDLYLDSPDPLL
PHLLAEPVATILPRELKGEAGFALQPVGTGPYKVTANDPLHLCLEAFDDYFGLRALLDEIDIWMLPELAERLETHLQLGR
DSPELGTMRGESELESGCYFLLQDDRSVSLQDPALRHWLAQLLNPIALMARVAPELQRGWTSALGLLPHWREALPASLPT
PEQLPTRLVLACFNQHLEFNECAGAMASLLAEQGIRLEVRTLDYGRWVSGVDEDVDLWLGTLNLEHEHAFAPYAWLLGTP
LLHKVWASQHALWQGLTRWRASGEEPGPRALLARVQQQGWFVPLFHHWLELESRVGVHGVRMTALGWFDFRSAWLRPE

Sequences:

>Translated_558_residues
MPTSRLYQQFQRLAQQLGCDEREASLAEVADLLCCTPRNARLLLRRMQDQGWLSWSAEAGRGRRSRLTLLDSQESLTRRR
LRDLLSQGQLAQAVRLAEGRLDLLTPLLIEQLGQATREGRQILRVPYYRPLPQLLPTDPLRRSEIHLSRQIFNGLTRRNE
ENGEIEGDLAHHWECLGPCHWRFYLRPVVRFHHGRELVVEDVMESLLALRDRPLFAHLVRLESPWPRTLDLYLDSPDPLL
PHLLAEPVATILPRELKGEAGFALQPVGTGPYKVTANDPLHLCLEAFDDYFGLRALLDEIDIWMLPELAERLETHLQLGR
DSPELGTMRGESELESGCYFLLQDDRSVSLQDPALRHWLAQLLNPIALMARVAPELQRGWTSALGLLPHWREALPASLPT
PEQLPTRLVLACFNQHLEFNECAGAMASLLAEQGIRLEVRTLDYGRWVSGVDEDVDLWLGTLNLEHEHAFAPYAWLLGTP
LLHKVWASQHALWQGLTRWRASGEEPGPRALLARVQQQGWFVPLFHHWLELESRVGVHGVRMTALGWFDFRSAWLRPE
>Mature_557_residues
PTSRLYQQFQRLAQQLGCDEREASLAEVADLLCCTPRNARLLLRRMQDQGWLSWSAEAGRGRRSRLTLLDSQESLTRRRL
RDLLSQGQLAQAVRLAEGRLDLLTPLLIEQLGQATREGRQILRVPYYRPLPQLLPTDPLRRSEIHLSRQIFNGLTRRNEE
NGEIEGDLAHHWECLGPCHWRFYLRPVVRFHHGRELVVEDVMESLLALRDRPLFAHLVRLESPWPRTLDLYLDSPDPLLP
HLLAEPVATILPRELKGEAGFALQPVGTGPYKVTANDPLHLCLEAFDDYFGLRALLDEIDIWMLPELAERLETHLQLGRD
SPELGTMRGESELESGCYFLLQDDRSVSLQDPALRHWLAQLLNPIALMARVAPELQRGWTSALGLLPHWREALPASLPTP
EQLPTRLVLACFNQHLEFNECAGAMASLLAEQGIRLEVRTLDYGRWVSGVDEDVDLWLGTLNLEHEHAFAPYAWLLGTPL
LHKVWASQHALWQGLTRWRASGEEPGPRALLARVQQQGWFVPLFHHWLELESRVGVHGVRMTALGWFDFRSAWLRPE

Specific function: Activates the small RNA gene sgrS under glucose- phosphate stress conditions as well as yfdZ. Represses its own transcription under both stress and non-stress conditions. Might act as a sensor of the intracellular accumulation of phosphoglucose by binding

COG id: COG4533

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786256, Length=561, Percent_Identity=43.6720142602496, Blast_Score=435, Evalue=1e-123,
Organism=Escherichia coli, GI1786650, Length=574, Percent_Identity=29.4425087108014, Blast_Score=183, Evalue=2e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 63953; Mature: 63822

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTSRLYQQFQRLAQQLGCDEREASLAEVADLLCCTPRNARLLLRRMQDQGWLSWSAEAG
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCC
RGRRSRLTLLDSQESLTRRRLRDLLSQGQLAQAVRLAEGRLDLLTPLLIEQLGQATREGR
CCCCCEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCH
QILRVPYYRPLPQLLPTDPLRRSEIHLSRQIFNGLTRRNEENGEIEGDLAHHWECLGPCH
HEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCHH
WRFYLRPVVRFHHGRELVVEDVMESLLALRDRPLFAHLVRLESPWPRTLDLYLDSPDPLL
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEECCCCCHH
PHLLAEPVATILPRELKGEAGFALQPVGTGPYKVTANDPLHLCLEAFDDYFGLRALLDEI
HHHHHHHHHHHCCHHHCCCCCCEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHH
DIWMLPELAERLETHLQLGRDSPELGTMRGESELESGCYFLLQDDRSVSLQDPALRHWLA
CHHCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCEEEEECCCCCCCCCHHHHHHHH
QLLNPIALMARVAPELQRGWTSALGLLPHWREALPASLPTPEQLPTRLVLACFNQHLEFN
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHH
ECAGAMASLLAEQGIRLEVRTLDYGRWVSGVDEDVDLWLGTLNLEHEHAFAPYAWLLGTP
HHHHHHHHHHHHCCCEEEEEEECCCCHHCCCCCCHHHEEEEECCCCCCCCCCHHHHHCCH
LLHKVWASQHALWQGLTRWRASGEEPGPRALLARVQQQGWFVPLFHHWLELESRVGVHGV
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEE
RMTALGWFDFRSAWLRPE
EEHHEEHHHHHHHCCCCC
>Mature Secondary Structure 
PTSRLYQQFQRLAQQLGCDEREASLAEVADLLCCTPRNARLLLRRMQDQGWLSWSAEAG
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCC
RGRRSRLTLLDSQESLTRRRLRDLLSQGQLAQAVRLAEGRLDLLTPLLIEQLGQATREGR
CCCCCEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCH
QILRVPYYRPLPQLLPTDPLRRSEIHLSRQIFNGLTRRNEENGEIEGDLAHHWECLGPCH
HEEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCHH
WRFYLRPVVRFHHGRELVVEDVMESLLALRDRPLFAHLVRLESPWPRTLDLYLDSPDPLL
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEECCCCCHH
PHLLAEPVATILPRELKGEAGFALQPVGTGPYKVTANDPLHLCLEAFDDYFGLRALLDEI
HHHHHHHHHHHCCHHHCCCCCCEEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHH
DIWMLPELAERLETHLQLGRDSPELGTMRGESELESGCYFLLQDDRSVSLQDPALRHWLA
CHHCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCEEEEECCCCCCCCCHHHHHHHH
QLLNPIALMARVAPELQRGWTSALGLLPHWREALPASLPTPEQLPTRLVLACFNQHLEFN
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHH
ECAGAMASLLAEQGIRLEVRTLDYGRWVSGVDEDVDLWLGTLNLEHEHAFAPYAWLLGTP
HHHHHHHHHHHHCCCEEEEEEECCCCHHCCCCCCHHHEEEEECCCCCCCCCCHHHHHCCH
LLHKVWASQHALWQGLTRWRASGEEPGPRALLARVQQQGWFVPLFHHWLELESRVGVHGV
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEE
RMTALGWFDFRSAWLRPE
EEHHEEHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA