Definition Aeromonas salmonicida subsp. salmonicida A449, complete genome.
Accession NC_009348
Length 4,702,402

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The map label for this gene is ydfG [C]

Identifier: 145300574

GI number: 145300574

Start: 3994352

End: 3995110

Strand: Direct

Name: ydfG [C]

Synonym: ASA_3706

Alternate gene names: 145300574

Gene position: 3994352-3995110 (Clockwise)

Preceding gene: 145300573

Following gene: 145300576

Centisome position: 84.94

GC content: 63.77

Gene sequence:

>759_bases
ATGGAGGTTCAGATGATTGCAATGGTAACGGGTGCTTCGTCCGGCTTTGGGGAGGCCATCAGCCGCCAGCTGGTGCAGGC
GGGCTACAAGGTGATCGGCACCGGTCGTCGCGCCGAGCGGCTGGCTGCGTTGGCTGACGAGCTGGGCGAGCAGTTCCTGC
CGCTGGTATTCGACGTGCAGGACAAGACGGCGACTCAAGCCGCCATCGCTGGCCTGCCGGCTGCCTGGCAAGAAGTGGAT
CTGCTGGTCAACAACGCCGGTCTGGCCCTGGGGCTGGAACCCGCCCACAAGGCGGACCTCGAAGACTGGGAGCAGATGAT
AGCCACCAACATCAGCGGTTTGACTCTGCTCACCCGATTGCTGCTGCCGGGCATGGTGGCGCGCAATCGTGGCCACGTGG
TCAACATAGGCTCCATCGCAGGCACCTACCCCTATCCGGGCGGCAACGTCTACGGCGCCACCAAGGCATTCGTGAAACAG
TTCAGCCTCAACCTGCGCGCCGACCTGGCGGGCACCGCCATCCGTGTCACCAATGTGGAGCCTGGTCTGTGTGGCGGCAC
CGAGTTCTCCAACGTGCGCTTCCACGGTGACGACGCCAAGGCCGCGACCGTCTATCAGGGGGTGCAGGCCATTCAGCCGG
AAGACATCGCCAACACAGTGCTCTGGGTCAGCCAGCAGCCGGCCCATGTCAACATCAACAGCATAGAGATGATGCCGGTG
GCCCAGACCTTCGGTCCGCTCCAGATCAGTCGCCGCTGA

Upstream 100 bases:

>100_bases
ATCTGGTGGTATTTGTCTGGCGAAAGGTGACCGGGCGTGAATTGAGCGATGAATGAATCTGAGTGGATTCAAACACATAA
ATAACAATATCGGTGTAGAT

Downstream 100 bases:

>100_bases
GCTTCCCGTTTGGCGAAACAAGAAGAGGCACCCAAGGGTGCCTCTTTGCTTTGAAGAGCCGGTCAGAGGCTCATGATCTT
CTTGAACTCCTCCTCTGAAT

Product: short-chain alcohol dehydrogenase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MEVQMIAMVTGASSGFGEAISRQLVQAGYKVIGTGRRAERLAALADELGEQFLPLVFDVQDKTATQAAIAGLPAAWQEVD
LLVNNAGLALGLEPAHKADLEDWEQMIATNISGLTLLTRLLLPGMVARNRGHVVNIGSIAGTYPYPGGNVYGATKAFVKQ
FSLNLRADLAGTAIRVTNVEPGLCGGTEFSNVRFHGDDAKAATVYQGVQAIQPEDIANTVLWVSQQPAHVNINSIEMMPV
AQTFGPLQISRR

Sequences:

>Translated_252_residues
MEVQMIAMVTGASSGFGEAISRQLVQAGYKVIGTGRRAERLAALADELGEQFLPLVFDVQDKTATQAAIAGLPAAWQEVD
LLVNNAGLALGLEPAHKADLEDWEQMIATNISGLTLLTRLLLPGMVARNRGHVVNIGSIAGTYPYPGGNVYGATKAFVKQ
FSLNLRADLAGTAIRVTNVEPGLCGGTEFSNVRFHGDDAKAATVYQGVQAIQPEDIANTVLWVSQQPAHVNINSIEMMPV
AQTFGPLQISRR
>Mature_252_residues
MEVQMIAMVTGASSGFGEAISRQLVQAGYKVIGTGRRAERLAALADELGEQFLPLVFDVQDKTATQAAIAGLPAAWQEVD
LLVNNAGLALGLEPAHKADLEDWEQMIATNISGLTLLTRLLLPGMVARNRGHVVNIGSIAGTYPYPGGNVYGATKAFVKQ
FSLNLRADLAGTAIRVTNVEPGLCGGTEFSNVRFHGDDAKAATVYQGVQAIQPEDIANTVLWVSQQPAHVNINSIEMMPV
AQTFGPLQISRR

Specific function: Unknown

COG id: COG4221

COG function: function code R; Short-chain alcohol dehydrogenase of unknown specificity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI109715829, Length=248, Percent_Identity=33.4677419354839, Blast_Score=129, Evalue=3e-30,
Organism=Homo sapiens, GI7705855, Length=200, Percent_Identity=32.5, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI20149619, Length=187, Percent_Identity=33.6898395721925, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI7706318, Length=254, Percent_Identity=28.740157480315, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI4557649, Length=183, Percent_Identity=31.1475409836066, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI157739938, Length=184, Percent_Identity=28.804347826087, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI40548397, Length=178, Percent_Identity=31.4606741573034, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI214010158, Length=178, Percent_Identity=31.4606741573034, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI214010156, Length=178, Percent_Identity=31.4606741573034, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI22758144, Length=178, Percent_Identity=31.4606741573034, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI150247226, Length=189, Percent_Identity=30.6878306878307, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI22507405, Length=177, Percent_Identity=32.7683615819209, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI40254992, Length=179, Percent_Identity=31.8435754189944, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI19923817, Length=186, Percent_Identity=25.8064516129032, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI7657478, Length=183, Percent_Identity=33.879781420765, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI226371731, Length=181, Percent_Identity=28.7292817679558, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI5031737, Length=233, Percent_Identity=30.9012875536481, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI32483357, Length=232, Percent_Identity=28.0172413793103, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI19743808, Length=177, Percent_Identity=29.3785310734463, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI50726952, Length=185, Percent_Identity=30.8108108108108, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI4504503, Length=186, Percent_Identity=30.1075268817204, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI4758504, Length=193, Percent_Identity=29.0155440414508, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI33667109, Length=190, Percent_Identity=31.0526315789474, Blast_Score=66, Evalue=4e-11,
Organism=Escherichia coli, GI1787820, Length=248, Percent_Identity=62.0967741935484, Blast_Score=338, Evalue=3e-94,
Organism=Escherichia coli, GI1787335, Length=237, Percent_Identity=33.7552742616034, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI87082100, Length=181, Percent_Identity=34.8066298342541, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1786812, Length=240, Percent_Identity=29.5833333333333, Blast_Score=80, Evalue=9e-17,
Organism=Escherichia coli, GI2367175, Length=247, Percent_Identity=26.3157894736842, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1790717, Length=178, Percent_Identity=27.5280898876405, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1786701, Length=181, Percent_Identity=27.0718232044199, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1789208, Length=239, Percent_Identity=25.1046025104602, Blast_Score=63, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI71994604, Length=188, Percent_Identity=33.5106382978723, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17559104, Length=244, Percent_Identity=29.0983606557377, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17562910, Length=247, Percent_Identity=27.5303643724696, Blast_Score=84, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI71994600, Length=185, Percent_Identity=30.2702702702703, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17560332, Length=245, Percent_Identity=29.3877551020408, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI25152911, Length=199, Percent_Identity=30.1507537688442, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17562908, Length=187, Percent_Identity=29.4117647058824, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17538480, Length=244, Percent_Identity=26.2295081967213, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17565030, Length=249, Percent_Identity=28.1124497991968, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17562906, Length=187, Percent_Identity=29.4117647058824, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI193204405, Length=188, Percent_Identity=29.2553191489362, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17562904, Length=239, Percent_Identity=28.4518828451883, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17560676, Length=236, Percent_Identity=26.6949152542373, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17560220, Length=193, Percent_Identity=28.4974093264249, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17531453, Length=242, Percent_Identity=23.5537190082645, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI115534694, Length=178, Percent_Identity=32.0224719101124, Blast_Score=70, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17538486, Length=192, Percent_Identity=29.1666666666667, Blast_Score=70, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI17538182, Length=190, Percent_Identity=30.5263157894737, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17551412, Length=250, Percent_Identity=25.2, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17562990, Length=236, Percent_Identity=25.4237288135593, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71997402, Length=181, Percent_Identity=31.4917127071823, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17544670, Length=245, Percent_Identity=23.6734693877551, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17559552, Length=187, Percent_Identity=28.3422459893048, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI212646214, Length=185, Percent_Identity=25.9459459459459, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17560150, Length=183, Percent_Identity=26.775956284153, Blast_Score=65, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=252, Percent_Identity=34.5238095238095, Blast_Score=144, Evalue=1e-35,
Organism=Saccharomyces cerevisiae, GI6322067, Length=180, Percent_Identity=32.7777777777778, Blast_Score=83, Evalue=4e-17,
Organism=Saccharomyces cerevisiae, GI6322227, Length=199, Percent_Identity=25.1256281407035, Blast_Score=74, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6319635, Length=183, Percent_Identity=28.9617486338798, Blast_Score=69, Evalue=7e-13,
Organism=Saccharomyces cerevisiae, GI6322226, Length=190, Percent_Identity=23.6842105263158, Blast_Score=62, Evalue=7e-11,
Organism=Drosophila melanogaster, GI116007236, Length=253, Percent_Identity=32.0158102766798, Blast_Score=121, Evalue=5e-28,
Organism=Drosophila melanogaster, GI281364494, Length=253, Percent_Identity=29.6442687747036, Blast_Score=107, Evalue=9e-24,
Organism=Drosophila melanogaster, GI24640442, Length=201, Percent_Identity=32.8358208955224, Blast_Score=105, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24641232, Length=257, Percent_Identity=32.295719844358, Blast_Score=102, Evalue=3e-22,
Organism=Drosophila melanogaster, GI24584748, Length=197, Percent_Identity=30.4568527918782, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI161076933, Length=197, Percent_Identity=30.4568527918782, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI21358495, Length=184, Percent_Identity=32.6086956521739, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI23397609, Length=180, Percent_Identity=35.5555555555556, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI116007234, Length=253, Percent_Identity=32.0158102766798, Blast_Score=95, Evalue=3e-20,
Organism=Drosophila melanogaster, GI21357041, Length=182, Percent_Identity=31.8681318681319, Blast_Score=93, Evalue=1e-19,
Organism=Drosophila melanogaster, GI28571526, Length=182, Percent_Identity=32.967032967033, Blast_Score=92, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24641388, Length=252, Percent_Identity=29.3650793650794, Blast_Score=91, Evalue=6e-19,
Organism=Drosophila melanogaster, GI116007238, Length=186, Percent_Identity=34.4086021505376, Blast_Score=91, Evalue=9e-19,
Organism=Drosophila melanogaster, GI24663911, Length=252, Percent_Identity=28.1746031746032, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24584744, Length=192, Percent_Identity=32.8125, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI28574402, Length=192, Percent_Identity=32.8125, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24648693, Length=251, Percent_Identity=28.6852589641434, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI21355889, Length=251, Percent_Identity=28.6852589641434, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI28571387, Length=254, Percent_Identity=30.3149606299213, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24643142, Length=176, Percent_Identity=32.3863636363636, Blast_Score=85, Evalue=5e-17,
Organism=Drosophila melanogaster, GI24644339, Length=182, Percent_Identity=30.7692307692308, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI21355631, Length=172, Percent_Identity=30.2325581395349, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24648944, Length=240, Percent_Identity=27.5, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI116007232, Length=186, Percent_Identity=35.4838709677419, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI17737361, Length=192, Percent_Identity=30.2083333333333, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24584752, Length=187, Percent_Identity=28.8770053475936, Blast_Score=70, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24639444, Length=239, Percent_Identity=29.2887029288703, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24580925, Length=175, Percent_Identity=26.2857142857143, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 26854; Mature: 26854

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MEVQMIAMVTGASSGFGEAISRQLVQAGYKVIGTGRRAERLAALADELGEQFLPLVFDVQ
CCEEEEEEEECCCCCHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHCCEEEECC
DKTATQAAIAGLPAAWQEVDLLVNNAGLALGLEPAHKADLEDWEQMIATNISGLTLLTRL
CCHHHHHHHHCCCCHHHHHHHEEECCCEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHH
LLPGMVARNRGHVVNIGSIAGTYPYPGGNVYGATKAFVKQFSLNLRADLAGTAIRVTNVE
HHCCHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCEEEEECCC
PGLCGGTEFSNVRFHGDDAKAATVYQGVQAIQPEDIANTVLWVSQQPAHVNINSIEMMPV
CCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCHHHHCEEEEEECCCCEEECCCEEEEEH
AQTFGPLQISRR
HHHCCCEEECCC
>Mature Secondary Structure
MEVQMIAMVTGASSGFGEAISRQLVQAGYKVIGTGRRAERLAALADELGEQFLPLVFDVQ
CCEEEEEEEECCCCCHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHCCEEEECC
DKTATQAAIAGLPAAWQEVDLLVNNAGLALGLEPAHKADLEDWEQMIATNISGLTLLTRL
CCHHHHHHHHCCCCHHHHHHHEEECCCEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHH
LLPGMVARNRGHVVNIGSIAGTYPYPGGNVYGATKAFVKQFSLNLRADLAGTAIRVTNVE
HHCCHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCEEEEECCC
PGLCGGTEFSNVRFHGDDAKAATVYQGVQAIQPEDIANTVLWVSQQPAHVNINSIEMMPV
CCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCHHHHCEEEEEECCCCEEECCCEEEEEH
AQTFGPLQISRR
HHHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]