| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is tapZ
Identifier: 145300516
GI number: 145300516
Start: 3934265
End: 3936643
Strand: Direct
Name: tapZ
Synonym: ASA_3648
Alternate gene names: NA
Gene position: 3934265-3936643 (Clockwise)
Preceding gene: 145300514
Following gene: 145300519
Centisome position: 83.67
GC content: 57.76
Gene sequence:
>2379_bases ATGGATTCAGAACAACAACAACACTTGATCGAACAGCTCATTCCTCTGCTCAGAGAAAAAGATTTCGATGACATCTTCAA CCGCCTGACTCAAGGTGAAAACAGCAACAGCCGTTTTCTGATCAAGATGGAGATCAAGCGCAGATGTACTCCCTGCCGGC GGATCATCGACATGCGTGACGAGCTGGGAGAGGAGTGCCTGGTTCATGAATTTGAAGGGGTCACCCACTTCATGCCTGCC GAGGCCATAGGCTTGTTCCAGTCCCAATGCTATCTCTATCGCGATCTGTACACCCTCGGCGTGTACGAGACGCTGCAATA TTGGCAGAAGCACCACCAGCACAAGAGCGACAATCAGTTGCAGCCGCCCACCAGCCCCTTTCGACAATTCGACGTCAATG CCATTCCCTTCGCCAGCTACTATGGTCGACGTCAGGAGCGAATGCACTTCAGCTCTCCCGTGGTGATCAAGTTTGCCGAT GGAGAAAAGCTGTTTGCCAAAAGCTCGGATCTCTCCATCGGCGGCATTCGCGTCTCGGTCTCCTATCTGCCCAATTACCA GACCGGGGCCCAGGTCGAAGTCTTCTTTACCGGCCTGGAACGGGACCATCCCAACCCAGTCCTGCACCAACCGGTCAGCT ACCAGATCCTGGGAGAAGAAAGCAAGGAGGGGAAATATTGGCTGAGGCTGGTCAAGACAGGTGAGCACCCGGGTTTTGAT ACCTTCCTCACGGAATTTATCGAGAACAACAAGAGCCGCTATCGGGTCAGTGTCGACTACCTGCTGTCGGCCGCCATCAT CAAGGGCTACGAGCAGTTCTACCTGCCTCGCATGACCGGCATGCCGCTTTTCTTCGGCTCGGGAGACAGCCCCAGCCTCG AGATTGCCCTTCGTACCGAGAATAACCAGCACATTCTCGAATACTGGCGCGATGCCAAGAACCGCGACATGCTCGCCAGC CTCTTTTCGGCAGCCCGTATGCAATCCCTGCTGCCCGCAGCGGGTACCTTGCGTGAGACCCTGATCTACTGCTTCACCCA CTCGGTTCGCAGCCACCTCTATTTTTTCTCCGCCACCCTGGAAGAGTTGCAGCAGAGCGGCCTGACCTCACTGTTTTTCC AGGTTGGTGCTCGTCGGCCCAGCTGGCGCGTCTATAAATTCAGCCTCGAACGCTGCGCGCTGCACGAGGCCGACCTCGCC AGCCAGCAGAACCAGGAGAGCCTGCAGTTGCAGGACATGCTGCTGCAAGAACGGCTCAAGCAGATAAGCCATGTCGGCTT GCTGCAGGAGATTGGCCTTGAAAACCAGCGGGAAGAGTTTCAATACGATGCCACCTTGCAGCACAACGCCAACGAGTTGC AGCGCTTCGGCCACGATACCGGGGCGGCCCCCTTTGAAATCGAGACGCTGCACTATGTTCAACTGCGCAAAGAAGCACGC TACATCCACAAGACGGCCGTTGCCATCAAGCACAATGGCAAGGCTTGGCTGGGCTGGACCCGCGACATCTCGGCCCACGG CATGCAGATAGAGCTGGAAGAGGCGATCGATGGCGCGAAAGACGACATAGTCACCATCGCCTTGCCCCGTTTGCAGGAGC TCTCCAAGAGCATGGACTTGCAACACCTCTCCTATCGGCTGGTCAGCATCAACCAGACACGGACTGTGCTGCATCTCTGC ATCGAGGGGGACCCGGAGCGCCATACCGGCCGCCAGTTCTTCAGCCTGCTGATTGAAAGCAACCAGAACAAACTCAAGGC GGCGCAGGAACAGCGCCGTTATCGCGGCATGGCCAGGGCGCTGCGCAACATCTACACCCACCATGTCTTCAGTACCCCTG TGTACATCAACAAGCTGAAGGGAGCCCCGAGACCGGCCTCCATCGGCCATGCCCCTCATACACGCAGCCTGTCACGTCTG CTGCGGGCCTATGCCGAGCGCAGCGATCAAGACAACCTCTATCCCCTGTTCCAGGGAGACCTGCTCAAACAACTGGTCAT GAACCCGCTGCGCGCTATCGAGCGGGAGGACAAGCCCCAGGAGGAAGAGGTCTACATCGCCAGCCTGCATACGCCAGCCG GCCTGCCCGTGTTTACCAGCCGACTGGCCAGCAGCTTTCAGAGCCTGGCGGAAAAACGCAGCTTCATCGAACAGGCCTTG CGCCAGGGGGACTTCTACTCTGTGCTGGTCGGCATCTCCCGCACCGGGCGACCCGACACCAACTTTATCGCCAACGAGCT GGACTACATCGCCAAGTTCGCCATTCACAAGGCCAAAAAGCTGGAAGAGGAGCTGTGGAGCGTGGTGGGCGTGGGTGAGT TGACCGATACCAGTCAGGCCACCCTGTTCCGGCTCGGCATCACTTCGCCGCAACACTGA
Upstream 100 bases:
>100_bases GGATAACTCGGGGACAGGATGAATTCCTGCTTGATATACTTGTTTGCGACCGACAGATCAAACCCAGAATCGGAAAAATG ACTTTCCGTGGCAGGAACAC
Downstream 100 bases:
>100_bases GCCCGCCTGAACGAAACAGGGCGCAACATGCGCCCTGTTTTTATTGTCATGCCGCCTGCGGGTTGAGCAGCCATGCGAGG ATCTGCGGGAAGTGATCCTC
Product: type IV pilus assembly TapZ
Products: NA
Alternate protein names: Type IV Pilus Assembly Protein PilZ; Type IV Pilus Assembly TapZ; Glycosyltransferase
Number of amino acids: Translated: 792; Mature: 792
Protein sequence:
>792_residues MDSEQQQHLIEQLIPLLREKDFDDIFNRLTQGENSNSRFLIKMEIKRRCTPCRRIIDMRDELGEECLVHEFEGVTHFMPA EAIGLFQSQCYLYRDLYTLGVYETLQYWQKHHQHKSDNQLQPPTSPFRQFDVNAIPFASYYGRRQERMHFSSPVVIKFAD GEKLFAKSSDLSIGGIRVSVSYLPNYQTGAQVEVFFTGLERDHPNPVLHQPVSYQILGEESKEGKYWLRLVKTGEHPGFD TFLTEFIENNKSRYRVSVDYLLSAAIIKGYEQFYLPRMTGMPLFFGSGDSPSLEIALRTENNQHILEYWRDAKNRDMLAS LFSAARMQSLLPAAGTLRETLIYCFTHSVRSHLYFFSATLEELQQSGLTSLFFQVGARRPSWRVYKFSLERCALHEADLA SQQNQESLQLQDMLLQERLKQISHVGLLQEIGLENQREEFQYDATLQHNANELQRFGHDTGAAPFEIETLHYVQLRKEAR YIHKTAVAIKHNGKAWLGWTRDISAHGMQIELEEAIDGAKDDIVTIALPRLQELSKSMDLQHLSYRLVSINQTRTVLHLC IEGDPERHTGRQFFSLLIESNQNKLKAAQEQRRYRGMARALRNIYTHHVFSTPVYINKLKGAPRPASIGHAPHTRSLSRL LRAYAERSDQDNLYPLFQGDLLKQLVMNPLRAIEREDKPQEEEVYIASLHTPAGLPVFTSRLASSFQSLAEKRSFIEQAL RQGDFYSVLVGISRTGRPDTNFIANELDYIAKFAIHKAKKLEEELWSVVGVGELTDTSQATLFRLGITSPQH
Sequences:
>Translated_792_residues MDSEQQQHLIEQLIPLLREKDFDDIFNRLTQGENSNSRFLIKMEIKRRCTPCRRIIDMRDELGEECLVHEFEGVTHFMPA EAIGLFQSQCYLYRDLYTLGVYETLQYWQKHHQHKSDNQLQPPTSPFRQFDVNAIPFASYYGRRQERMHFSSPVVIKFAD GEKLFAKSSDLSIGGIRVSVSYLPNYQTGAQVEVFFTGLERDHPNPVLHQPVSYQILGEESKEGKYWLRLVKTGEHPGFD TFLTEFIENNKSRYRVSVDYLLSAAIIKGYEQFYLPRMTGMPLFFGSGDSPSLEIALRTENNQHILEYWRDAKNRDMLAS LFSAARMQSLLPAAGTLRETLIYCFTHSVRSHLYFFSATLEELQQSGLTSLFFQVGARRPSWRVYKFSLERCALHEADLA SQQNQESLQLQDMLLQERLKQISHVGLLQEIGLENQREEFQYDATLQHNANELQRFGHDTGAAPFEIETLHYVQLRKEAR YIHKTAVAIKHNGKAWLGWTRDISAHGMQIELEEAIDGAKDDIVTIALPRLQELSKSMDLQHLSYRLVSINQTRTVLHLC IEGDPERHTGRQFFSLLIESNQNKLKAAQEQRRYRGMARALRNIYTHHVFSTPVYINKLKGAPRPASIGHAPHTRSLSRL LRAYAERSDQDNLYPLFQGDLLKQLVMNPLRAIEREDKPQEEEVYIASLHTPAGLPVFTSRLASSFQSLAEKRSFIEQAL RQGDFYSVLVGISRTGRPDTNFIANELDYIAKFAIHKAKKLEEELWSVVGVGELTDTSQATLFRLGITSPQH >Mature_792_residues MDSEQQQHLIEQLIPLLREKDFDDIFNRLTQGENSNSRFLIKMEIKRRCTPCRRIIDMRDELGEECLVHEFEGVTHFMPA EAIGLFQSQCYLYRDLYTLGVYETLQYWQKHHQHKSDNQLQPPTSPFRQFDVNAIPFASYYGRRQERMHFSSPVVIKFAD GEKLFAKSSDLSIGGIRVSVSYLPNYQTGAQVEVFFTGLERDHPNPVLHQPVSYQILGEESKEGKYWLRLVKTGEHPGFD TFLTEFIENNKSRYRVSVDYLLSAAIIKGYEQFYLPRMTGMPLFFGSGDSPSLEIALRTENNQHILEYWRDAKNRDMLAS LFSAARMQSLLPAAGTLRETLIYCFTHSVRSHLYFFSATLEELQQSGLTSLFFQVGARRPSWRVYKFSLERCALHEADLA SQQNQESLQLQDMLLQERLKQISHVGLLQEIGLENQREEFQYDATLQHNANELQRFGHDTGAAPFEIETLHYVQLRKEAR YIHKTAVAIKHNGKAWLGWTRDISAHGMQIELEEAIDGAKDDIVTIALPRLQELSKSMDLQHLSYRLVSINQTRTVLHLC IEGDPERHTGRQFFSLLIESNQNKLKAAQEQRRYRGMARALRNIYTHHVFSTPVYINKLKGAPRPASIGHAPHTRSLSRL LRAYAERSDQDNLYPLFQGDLLKQLVMNPLRAIEREDKPQEEEVYIASLHTPAGLPVFTSRLASSFQSLAEKRSFIEQAL RQGDFYSVLVGISRTGRPDTNFIANELDYIAKFAIHKAKKLEEELWSVVGVGELTDTSQATLFRLGITSPQH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91301; Mature: 91301
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSEQQQHLIEQLIPLLREKDFDDIFNRLTQGENSNSRFLIKMEIKRRCTPCRRIIDMRD CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEEEHHHCCCHHHHHHHHHH ELGEECLVHEFEGVTHFMPAEAIGLFQSQCYLYRDLYTLGVYETLQYWQKHHQHKSDNQL HHCHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC QPPTSPFRQFDVNAIPFASYYGRRQERMHFSSPVVIKFADGEKLFAKSSDLSIGGIRVSV CCCCCHHHHCCCCCCCCHHHHCCHHHHHCCCCCEEEEECCCCEEEECCCCCEECEEEEEE SYLPNYQTGAQVEVFFTGLERDHPNPVLHQPVSYQILGEESKEGKYWLRLVKTGEHPGFD EECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCHH TFLTEFIENNKSRYRVSVDYLLSAAIIKGYEQFYLPRMTGMPLFFGSGDSPSLEIALRTE HHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEEEEEC NNQHILEYWRDAKNRDMLASLFSAARMQSLLPAAGTLRETLIYCFTHSVRSHLYFFSATL CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EELQQSGLTSLFFQVGARRPSWRVYKFSLERCALHEADLASQQNQESLQLQDMLLQERLK HHHHHCCHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH QISHVGLLQEIGLENQREEFQYDATLQHNANELQRFGHDTGAAPFEIETLHYVQLRKEAR HHHHHHHHHHHCCCCCHHHHCCCCHHHCCHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHH YIHKTAVAIKHNGKAWLGWTRDISAHGMQIELEEAIDGAKDDIVTIALPRLQELSKSMDL HHHHHEEEEEECCCEEEEEECCCCCCCCEEEHHHHCCCCCCCEEEEEHHHHHHHHHHCCH QHLSYRLVSINQTRTVLHLCIEGDPERHTGRQFFSLLIESNQNKLKAAQEQRRYRGMARA HHHHEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LRNIYTHHVFSTPVYINKLKGAPRPASIGHAPHTRSLSRLLRAYAERSDQDNLYPLFQGD HHHHHHHHHHCCCHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHH LLKQLVMNPLRAIEREDKPQEEEVYIASLHTPAGLPVFTSRLASSFQSLAEKRSFIEQAL HHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RQGDFYSVLVGISRTGRPDTNFIANELDYIAKFAIHKAKKLEEELWSVVGVGELTDTSQA HCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC TLFRLGITSPQH EEEEECCCCCCC >Mature Secondary Structure MDSEQQQHLIEQLIPLLREKDFDDIFNRLTQGENSNSRFLIKMEIKRRCTPCRRIIDMRD CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEEEHHHCCCHHHHHHHHHH ELGEECLVHEFEGVTHFMPAEAIGLFQSQCYLYRDLYTLGVYETLQYWQKHHQHKSDNQL HHCHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC QPPTSPFRQFDVNAIPFASYYGRRQERMHFSSPVVIKFADGEKLFAKSSDLSIGGIRVSV CCCCCHHHHCCCCCCCCHHHHCCHHHHHCCCCCEEEEECCCCEEEECCCCCEECEEEEEE SYLPNYQTGAQVEVFFTGLERDHPNPVLHQPVSYQILGEESKEGKYWLRLVKTGEHPGFD EECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCHH TFLTEFIENNKSRYRVSVDYLLSAAIIKGYEQFYLPRMTGMPLFFGSGDSPSLEIALRTE HHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEEEEEEC NNQHILEYWRDAKNRDMLASLFSAARMQSLLPAAGTLRETLIYCFTHSVRSHLYFFSATL CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EELQQSGLTSLFFQVGARRPSWRVYKFSLERCALHEADLASQQNQESLQLQDMLLQERLK HHHHHCCHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH QISHVGLLQEIGLENQREEFQYDATLQHNANELQRFGHDTGAAPFEIETLHYVQLRKEAR HHHHHHHHHHHCCCCCHHHHCCCCHHHCCHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHH YIHKTAVAIKHNGKAWLGWTRDISAHGMQIELEEAIDGAKDDIVTIALPRLQELSKSMDL HHHHHEEEEEECCCEEEEEECCCCCCCCEEEHHHHCCCCCCCEEEEEHHHHHHHHHHCCH QHLSYRLVSINQTRTVLHLCIEGDPERHTGRQFFSLLIESNQNKLKAAQEQRRYRGMARA HHHHEEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LRNIYTHHVFSTPVYINKLKGAPRPASIGHAPHTRSLSRLLRAYAERSDQDNLYPLFQGD HHHHHHHHHHCCCHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHH LLKQLVMNPLRAIEREDKPQEEEVYIASLHTPAGLPVFTSRLASSFQSLAEKRSFIEQAL HHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RQGDFYSVLVGISRTGRPDTNFIANELDYIAKFAIHKAKKLEEELWSVVGVGELTDTSQA HCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC TLFRLGITSPQH EEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA