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The map label for this gene is ybbJ [H]

Identifier: 145300401

GI number: 145300401

Start: 3818172

End: 3818627

Strand: Direct

Name: ybbJ [H]

Synonym: ASA_3526

Alternate gene names: 145300401

Gene position: 3818172-3818627 (Clockwise)

Preceding gene: 145300400

Following gene: 145300403

Centisome position: 81.2

GC content: 64.69

Gene sequence:

>456_bases
ATGACAGCCCTGCTCGAGGGGCTGACCCACTGGCACTGGCTGGGGCTGGGTTTCATCCTCTTGGCCATAGAAGTGCTGGG
GTCGGTAGGCTTTTTGCTCTGGACCGGCATAGCCGCGCTGGAAGTGGGGCTGCTGCTGTTGCTGTGGCCCTTCGGCTGGC
AGGCGCAGCTGCTGTTGTTTGCGGTGCAATCCCTGCTCACTACCTGGGCCTGGTGGCGCTGGCAGCACAAGCGCGATCGT
TCGGGCCGTGATGCGGCCGCCCCCATCAATGAACGGATGCAGGGTTATGTGGGCCGGGAGCTGGTGTTGCTGGATGACGT
GGTGCAGGGGCTGAGCCGGGTCCATCTGGATGACACAGTCTGGACGGTGCGCAGCCAGATGCCGCTCACCGCCGGTAGCC
GGGTCAAGGTGGTCGGGACCGACTCCCATATCCTGCTGGTGGAACCCCTGCCCTGA

Upstream 100 bases:

>100_bases
ACAGCAAGATCATCATGATGCCGCTGGAAGCGGGCAGCTTGATCGGCTCGATAGCCGGCATGGCCGAGATGTTCAACAAA
GATGGCAAGGGTAACAAGTC

Downstream 100 bases:

>100_bases
CCCGAACGCGCTAGCATCGGCTTCACCACACCAAAAAGGGCTCCACGGAGCCCTTTTTCATGAGGATGGCGCGAGCGCTT
AGAAAGCGTCGGCGTCGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MTALLEGLTHWHWLGLGFILLAIEVLGSVGFLLWTGIAALEVGLLLLLWPFGWQAQLLLFAVQSLLTTWAWWRWQHKRDR
SGRDAAAPINERMQGYVGRELVLLDDVVQGLSRVHLDDTVWTVRSQMPLTAGSRVKVVGTDSHILLVEPLP

Sequences:

>Translated_151_residues
MTALLEGLTHWHWLGLGFILLAIEVLGSVGFLLWTGIAALEVGLLLLLWPFGWQAQLLLFAVQSLLTTWAWWRWQHKRDR
SGRDAAAPINERMQGYVGRELVLLDDVVQGLSRVHLDDTVWTVRSQMPLTAGSRVKVVGTDSHILLVEPLP
>Mature_150_residues
TALLEGLTHWHWLGLGFILLAIEVLGSVGFLLWTGIAALEVGLLLLLWPFGWQAQLLLFAVQSLLTTWAWWRWQHKRDRS
GRDAAAPINERMQGYVGRELVLLDDVVQGLSRVHLDDTVWTVRSQMPLTAGSRVKVVGTDSHILLVEPLP

Specific function: Unknown

COG id: COG1585

COG function: function code OU; Membrane protein implicated in regulation of membrane protease activity

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0826 [H]

Homologues:

Organism=Escherichia coli, GI145693099, Length=118, Percent_Identity=37.2881355932203, Blast_Score=91, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR002810 [H]

Pfam domain/function: PF01957 NfeD [H]

EC number: NA

Molecular weight: Translated: 16998; Mature: 16867

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALLEGLTHWHWLGLGFILLAIEVLGSVGFLLWTGIAALEVGLLLLLWPFGWQAQLLLF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
AVQSLLTTWAWWRWQHKRDRSGRDAAAPINERMQGYVGRELVLLDDVVQGLSRVHLDDTV
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHH
WTVRSQMPLTAGSRVKVVGTDSHILLVEPLP
HHHHCCCCCCCCCEEEEEECCCEEEEEECCC
>Mature Secondary Structure 
TALLEGLTHWHWLGLGFILLAIEVLGSVGFLLWTGIAALEVGLLLLLWPFGWQAQLLLF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
AVQSLLTTWAWWRWQHKRDRSGRDAAAPINERMQGYVGRELVLLDDVVQGLSRVHLDDTV
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHH
WTVRSQMPLTAGSRVKVVGTDSHILLVEPLP
HHHHCCCCCCCCCEEEEEECCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]