| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145300394
Identifier: 145300394
GI number: 145300394
Start: 3809175
End: 3810014
Strand: Direct
Name: 145300394
Synonym: ASA_3519
Alternate gene names: NA
Gene position: 3809175-3810014 (Clockwise)
Preceding gene: 145300392
Following gene: 145300400
Centisome position: 81.0
GC content: 32.26
Gene sequence:
>840_bases GTGAATCAATTGTCTTATTATTTGACAATTGAAGAAAAGTACAGTTTTTCAAAGCTTGATTTTGAAAATGTGTGTATGAA GTCACTGGCCAAGAAATCCTTTGAGCCAAGTGAGCATAAAGCAGTTTTTAGTTGCCTCATAAGTGCTTGTAACATCTTAA TCAAGGATGGTTTTGATGAATACAAGTATATCCATCGTAGTTTTCAAGAGTTTTATTCTGCAAAACATATTGAGTCTCTT CATCATAGTAAAAAGAAAATTTTCTATTCAAAGTGTTTAAGAGAAAAAAATTTCAGGCTAAGTATGGCAAAGATTCTTGA GTTTCTTTTTGAAATTGATGAGATGTATATGTTTGAATATTTAATCATTCCATATCTGGTTCAACATGAATGCATCATTC CATACAGTGATACCGATATAGATATATTAAGAGACATCAACTTAACACACCTTTTAGAAGTAATTATTGAATCTAAAAGT GCTGCTGGCAACGGGAATATGATTGAGACAAATTACACCAACCTCTTTATATACGTTCTTTTGTTTGGGGAGGATTTCAT CGACGAAGTATCCGAAAAAATAGATGATGAATTACGCAAAAACGACTTTAGCGCTATAAGAGAAAAACTTCATCCCTCTC ACATATGGCATAACTTATATGATATGTATCCTGTACAAAAAATTATTGAGTTGTTCTACGAAGGCAATAGCTTTATTTCA AAAATTTCAAGTGTATTAGAGTCCGAGCTTAGTGATGCAGAGAATACTCTAGATAGCAAACTTGATGAGGTGTTTGAGAA AACAGATGAACAAGAAAACGATGATGTATCCGATCTATGA
Upstream 100 bases:
>100_bases TTGGCGACTAATGAGATCGCACAAACTGGACTGAGTTCCCTTCCTCCGGTGATCTACTATTCGGAACAGCTATTTAGGAG ACACTCAAATATTAAGCGTT
Downstream 100 bases:
>100_bases TACAGATTCCCTAGGTCGGTACCATAACAAAATGTTTAAGAGGCATTACCAATTACTGATATTTTTTAAAACATACTGGT TTTAGTAATTAATATGGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MNQLSYYLTIEEKYSFSKLDFENVCMKSLAKKSFEPSEHKAVFSCLISACNILIKDGFDEYKYIHRSFQEFYSAKHIESL HHSKKKIFYSKCLREKNFRLSMAKILEFLFEIDEMYMFEYLIIPYLVQHECIIPYSDTDIDILRDINLTHLLEVIIESKS AAGNGNMIETNYTNLFIYVLLFGEDFIDEVSEKIDDELRKNDFSAIREKLHPSHIWHNLYDMYPVQKIIELFYEGNSFIS KISSVLESELSDAENTLDSKLDEVFEKTDEQENDDVSDL
Sequences:
>Translated_279_residues MNQLSYYLTIEEKYSFSKLDFENVCMKSLAKKSFEPSEHKAVFSCLISACNILIKDGFDEYKYIHRSFQEFYSAKHIESL HHSKKKIFYSKCLREKNFRLSMAKILEFLFEIDEMYMFEYLIIPYLVQHECIIPYSDTDIDILRDINLTHLLEVIIESKS AAGNGNMIETNYTNLFIYVLLFGEDFIDEVSEKIDDELRKNDFSAIREKLHPSHIWHNLYDMYPVQKIIELFYEGNSFIS KISSVLESELSDAENTLDSKLDEVFEKTDEQENDDVSDL >Mature_279_residues MNQLSYYLTIEEKYSFSKLDFENVCMKSLAKKSFEPSEHKAVFSCLISACNILIKDGFDEYKYIHRSFQEFYSAKHIESL HHSKKKIFYSKCLREKNFRLSMAKILEFLFEIDEMYMFEYLIIPYLVQHECIIPYSDTDIDILRDINLTHLLEVIIESKS AAGNGNMIETNYTNLFIYVLLFGEDFIDEVSEKIDDELRKNDFSAIREKLHPSHIWHNLYDMYPVQKIIELFYEGNSFIS KISSVLESELSDAENTLDSKLDEVFEKTDEQENDDVSDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32958; Mature: 32958
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQLSYYLTIEEKYSFSKLDFENVCMKSLAKKSFEPSEHKAVFSCLISACNILIKDGFDE CCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHH YKYIHRSFQEFYSAKHIESLHHSKKKIFYSKCLREKNFRLSMAKILEFLFEIDEMYMFEY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH LIIPYLVQHECIIPYSDTDIDILRDINLTHLLEVIIESKSAAGNGNMIETNYTNLFIYVL HHHHHHHHCCEECCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHH LFGEDFIDEVSEKIDDELRKNDFSAIREKLHPSHIWHNLYDMYPVQKIIELFYEGNSFIS HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH KISSVLESELSDAENTLDSKLDEVFEKTDEQENDDVSDL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MNQLSYYLTIEEKYSFSKLDFENVCMKSLAKKSFEPSEHKAVFSCLISACNILIKDGFDE CCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHH YKYIHRSFQEFYSAKHIESLHHSKKKIFYSKCLREKNFRLSMAKILEFLFEIDEMYMFEY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH LIIPYLVQHECIIPYSDTDIDILRDINLTHLLEVIIESKSAAGNGNMIETNYTNLFIYVL HHHHHHHHCCEECCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHH LFGEDFIDEVSEKIDDELRKNDFSAIREKLHPSHIWHNLYDMYPVQKIIELFYEGNSFIS HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH KISSVLESELSDAENTLDSKLDEVFEKTDEQENDDVSDL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA