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The map label for this gene is 145300389

Identifier: 145300389

GI number: 145300389

Start: 3803102

End: 3804388

Strand: Direct

Name: 145300389

Synonym: ASA_3514

Alternate gene names: NA

Gene position: 3803102-3804388 (Clockwise)

Preceding gene: 145300388

Following gene: 145300390

Centisome position: 80.88

GC content: 63.25

Gene sequence:

>1287_bases
ATGCGCGGATGCATCGCAACAACAAAACCGGAGGCTAACGTGCTGAAACTTGCCCTGCAAAGTCTCTGGGCCCGTCGTCT
CACCGCCGGGCTGACCCTGCTGGCCGTGGCCATCAGCGTCACCCTGCTGCTCGGGGTGGAGCGGGTTCGCACCCAGGCCC
GCGAGAGCTTTTCCAATACAGTATCGGGCACAGACCTTATCGTCGGCGCCCGCTCCGGCCAGGTCAACCTGCTGCTCTAC
TCGGTATTTCGCATCGGCAATCCCACCAACAACGTAGGCTGGGATGCCTATCAAGCCATCAAACAGAAACCCGGCGTGGC
CTGGACCATTCCCCTCTCACTCGGTGATTCCCACAAGGGTTTTCGGGTACTCGGTACCAATGGCGACTACTTCACTCATC
TGAAGTACGGCCAGCAGCAGTCGCTGCAACTGCGGGAGGGCGGCCGTTCGACACGCCATTCGAGGCCGGTACTCGGCGCC
CAGGTGGCAGAGAAGCTGGGCTACCGGCTGGATCAATCCATCATCATCGCCCACGGCGCCGGCAATACCTCCTTCAGCCA
GCACGACAACCTGCCGTTCAAAGTGGTGGGAATACTGGCACCGACCGGCACCCCCATCGATCGCACCATTCATGTGCCGC
TGGCCGGTATCGAGGCCATCCACCTCGGCTGGGATACGGGTCGTCACAGCAAGAACGTGACAGCCGAGCAGGCACTGGCG
CAGGATCTGACGCCTAAGACCATTACCGCCTTCATGGTGGGGCTGAGCAATCGCATCCTGGCGTTCCAGCTCCAGCGCAG
CGTCAACACCTACAGAGGCGAGCCGCTGATGGCGATCCTGCCGGGGGCGGCCCTGCAGGAGTTGTGGAGCCTGATGAGCG
TGGCAGAAACCGCGCTCTCGGTGATCGCCGGATTTGTGGTGGTAGCGGGCCTCATCGGCATGCTGACCACACTGCTGGCG
GGGCTCAACGAGCGGCGACGCGAGCTGGCCATATTGAGATCCCTCGGCGCGGGTCCGGCCCACCTCTTCCTGCTGCTGGC
GCTGGAAGCAATGGCCCTCACCACAGCGGGCATAGCCGTCGGAGTAGCCGCGCTCTATCTGGGGCAAGGGCTTGCCACTC
CATGGTTGCTCAGCCACTATGGCCTGCAATTGAGCCTGGGGCTGCCCAGCGCCTATGAATGGCAACTGCTGGGGCTGGTG
TGGCTGGCAGGCATGGTGATCGGCCTGCTGCCGGCGGCCCGCGCCTACCGTTACAGCCTGAGCGATGGCATGAGCATCCG
GGTCTAG

Upstream 100 bases:

>100_bases
CTCGAACCTCTCTTCCCGCGGGTTGAAAACCTGCAACAGCTCAACCGGAGGGCCATATGCTGACCATTCATCACCACGGC
ACCCGCCCGGCGGGATCCGC

Downstream 100 bases:

>100_bases
TGAGCGACAAACAGAAGGACAGATGATGAAGTGGAAAATAATGGCGCTGCTGGCCAGCCTGCTGGTGCTGCCGGCAGTGG
CCGCCGATTACAAGACCATC

Product: peptide ABC transporter permease

Products: NA

Alternate protein names: Peptide ABC Transporter Permease; Efflux ABC Transporter Permease Protein; ABC Efflux Transporter Permease Protein; ABC-Type Transport System Permease Component; ABC Transporter Permease; ABC Transport System Permease Protein; Antimicrobial Peptide ABC Transporter Permease; Peptide ABC Transporter Permease Component; ABC Transporter Transmembrane Permease; ABC-Type Transport System Permease; Transmembrane Protein; ABC Transporter Membrane Protein; Permease Component Protein; ABC Transporter Permease Protein

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MRGCIATTKPEANVLKLALQSLWARRLTAGLTLLAVAISVTLLLGVERVRTQARESFSNTVSGTDLIVGARSGQVNLLLY
SVFRIGNPTNNVGWDAYQAIKQKPGVAWTIPLSLGDSHKGFRVLGTNGDYFTHLKYGQQQSLQLREGGRSTRHSRPVLGA
QVAEKLGYRLDQSIIIAHGAGNTSFSQHDNLPFKVVGILAPTGTPIDRTIHVPLAGIEAIHLGWDTGRHSKNVTAEQALA
QDLTPKTITAFMVGLSNRILAFQLQRSVNTYRGEPLMAILPGAALQELWSLMSVAETALSVIAGFVVVAGLIGMLTTLLA
GLNERRRELAILRSLGAGPAHLFLLLALEAMALTTAGIAVGVAALYLGQGLATPWLLSHYGLQLSLGLPSAYEWQLLGLV
WLAGMVIGLLPAARAYRYSLSDGMSIRV

Sequences:

>Translated_428_residues
MRGCIATTKPEANVLKLALQSLWARRLTAGLTLLAVAISVTLLLGVERVRTQARESFSNTVSGTDLIVGARSGQVNLLLY
SVFRIGNPTNNVGWDAYQAIKQKPGVAWTIPLSLGDSHKGFRVLGTNGDYFTHLKYGQQQSLQLREGGRSTRHSRPVLGA
QVAEKLGYRLDQSIIIAHGAGNTSFSQHDNLPFKVVGILAPTGTPIDRTIHVPLAGIEAIHLGWDTGRHSKNVTAEQALA
QDLTPKTITAFMVGLSNRILAFQLQRSVNTYRGEPLMAILPGAALQELWSLMSVAETALSVIAGFVVVAGLIGMLTTLLA
GLNERRRELAILRSLGAGPAHLFLLLALEAMALTTAGIAVGVAALYLGQGLATPWLLSHYGLQLSLGLPSAYEWQLLGLV
WLAGMVIGLLPAARAYRYSLSDGMSIRV
>Mature_428_residues
MRGCIATTKPEANVLKLALQSLWARRLTAGLTLLAVAISVTLLLGVERVRTQARESFSNTVSGTDLIVGARSGQVNLLLY
SVFRIGNPTNNVGWDAYQAIKQKPGVAWTIPLSLGDSHKGFRVLGTNGDYFTHLKYGQQQSLQLREGGRSTRHSRPVLGA
QVAEKLGYRLDQSIIIAHGAGNTSFSQHDNLPFKVVGILAPTGTPIDRTIHVPLAGIEAIHLGWDTGRHSKNVTAEQALA
QDLTPKTITAFMVGLSNRILAFQLQRSVNTYRGEPLMAILPGAALQELWSLMSVAETALSVIAGFVVVAGLIGMLTTLLA
GLNERRRELAILRSLGAGPAHLFLLLALEAMALTTAGIAVGVAALYLGQGLATPWLLSHYGLQLSLGLPSAYEWQLLGLV
WLAGMVIGLLPAARAYRYSLSDGMSIRV

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45877; Mature: 45877

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGCIATTKPEANVLKLALQSLWARRLTAGLTLLAVAISVTLLLGVERVRTQARESFSNT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VSGTDLIVGARSGQVNLLLYSVFRIGNPTNNVGWDAYQAIKQKPGVAWTIPLSLGDSHKG
CCCCEEEEECCCCCEEEHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCC
FRVLGTNGDYFTHLKYGQQQSLQLREGGRSTRHSRPVLGAQVAEKLGYRLDQSIIIAHGA
EEEEECCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECC
GNTSFSQHDNLPFKVVGILAPTGTPIDRTIHVPLAGIEAIHLGWDTGRHSKNVTAEQALA
CCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCHHHHHHH
QDLTPKTITAFMVGLSNRILAFQLQRSVNTYRGEPLMAILPGAALQELWSLMSVAETALS
HCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHH
VIAGFVVVAGLIGMLTTLLAGLNERRRELAILRSLGAGPAHLFLLLALEAMALTTAGIAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
GVAALYLGQGLATPWLLSHYGLQLSLGLPSAYEWQLLGLVWLAGMVIGLLPAARAYRYSL
HHHHHHHCCCCCCHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEC
SDGMSIRV
CCCCEECC
>Mature Secondary Structure
MRGCIATTKPEANVLKLALQSLWARRLTAGLTLLAVAISVTLLLGVERVRTQARESFSNT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VSGTDLIVGARSGQVNLLLYSVFRIGNPTNNVGWDAYQAIKQKPGVAWTIPLSLGDSHKG
CCCCEEEEECCCCCEEEHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCC
FRVLGTNGDYFTHLKYGQQQSLQLREGGRSTRHSRPVLGAQVAEKLGYRLDQSIIIAHGA
EEEEECCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECC
GNTSFSQHDNLPFKVVGILAPTGTPIDRTIHVPLAGIEAIHLGWDTGRHSKNVTAEQALA
CCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCHHHHHHH
QDLTPKTITAFMVGLSNRILAFQLQRSVNTYRGEPLMAILPGAALQELWSLMSVAETALS
HCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHH
VIAGFVVVAGLIGMLTTLLAGLNERRRELAILRSLGAGPAHLFLLLALEAMALTTAGIAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
GVAALYLGQGLATPWLLSHYGLQLSLGLPSAYEWQLLGLVWLAGMVIGLLPAARAYRYSL
HHHHHHHCCCCCCHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEC
SDGMSIRV
CCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA