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The map label for this gene is int [C]

Identifier: 145300333

GI number: 145300333

Start: 3746686

End: 3748023

Strand: Direct

Name: int [C]

Synonym: ASA_3457

Alternate gene names: 145300333

Gene position: 3746686-3748023 (Clockwise)

Preceding gene: 145300332

Following gene: 145300334

Centisome position: 79.68

GC content: 61.73

Gene sequence:

>1338_bases
ATGAAAGCGTTCAAATTCACCAAGGCCACGATCGATGCACTGTCCCCCGCTCCAGAGGGGAAGCAGGTCGAGTACTGTGA
TGCCATGGTGCAGGGGCTGAGGCTCCGGGTCGGGGCCACTGGGAGCAAGTCGTTTAGCGTGGCCAAGAGGAAAGAGGGAC
GCTTTATCAGGGCGACCTTGGGCCGCTACCCGGCATTGACCATCGACATGGCCCGCGCCAAGGCGTTGGAGATCCTGGGC
GATGTGGCCATGACCGGCCAGAACCCCAACGTGATCCGGCGTGAGCAGGACAAATTGAAGGTCACCCTGGGCGAAGCCAT
TGATGCCTACCTTGCCAGCCGAGGGGATCGGATCAGGTCGGAGACAGCCAAGCACTACCGCGCCGATCTCAACAACTACT
CCGGCGACTGGATGACGATCTCCTTGCTCAAGCTCACCAGGGAAAAGATCGAGGTACGGCACAAGGCCATCACCGAGGGC
TTGCCCGGCTCTTGGCATGGCGCGGCCCGTGAGTTTCGCAAGGCGGGGACCGGCAAGGGCAGCAAGGCACAGGCCGACCG
CTGGGCGCGTACCCTGCGGGCCGTGTGGCGCTTTGCCCGCGACCATTACCGGGATGCCAATGATCGGGTGATGCTGCCCG
AACCTCCGACCGAAGTCTTGAGCAGCAAGCGCCTCTGGCACAATAACCCCAGACGCAATGACCGGATCCGCACTCACGAA
CTCCGGCGCTGGCTGGATGCGGTGGAACAGGTCAGGCAATACGCCATCGACTGGCGAGACGACACCACCGCCACCGTCTG
CGATGCCATCGACATGGCACTGTTTACCGGCTTGCGCCGCTCCGAAGTGTTCCAGCTCACCTGGGATCGCGTCAGTATGA
GCGGCGGTTACTTCTGGATTGATAAGACCAAGAACGGCGACCCGCTGGAACTGCCGATCACCGAAACCCTGCTCACCATC
TTCCGCCGCCGCTGGCACTGGAACCTCAAACAGAGCCTATTCGTATTTCCCGGCCGCAACCCTGATCGTCCTATTCATGA
GCCGCGCCGGGTCATTGCCAAGATCTGCGCCGCCACCGTCCCCCACCCAAACCCGGACGGCCTGCCGCCGCTCGAGTTCA
AATGCCACGATGCCCGCCGCACCTTTGGCACCGTGGCCGAACTGGCCGAGGTCGGCCAGTACACCATCAAGCGCCTGATG
AACCACCGCACTCTGCGCAGTGCTGACGTGACGCAGGGCTATATCCATTTCACAGCGGACGAGCTGCGTAAACCGGCGAC
CAGGATCGAGCGGGATATTTTGGAATATGCAGGCCGCCTAAATAGCTGTTCCGAATAG

Upstream 100 bases:

>100_bases
GCCAAAAAAGGTCGCATAGGGTTTAAATATTGAGGTTACAGAGGTTACAAGACCTGTCTTGCCTGCCCTTCCTCTGGCTG
GCCTGTTTTGTGGGAGGAAG

Downstream 100 bases:

>100_bases
TAGATCACCGGAGGAAGGGAACTCAGTCCAGTTTGTGCGATCTCATTAGTCGCCAAACAAAACAAGCCACACCCAAAGGA
CTGAGTTGATGCCTATCCTA

Product: phage integrase

Products: NA

Alternate protein names: Integrase; Integrase Family Protein; Phage-Related Integrase; Phage Integrase Family Protein; Phage Related Integrase; Site-Specific Recombinase Phage Integrase Family; Site-Specific Recombinase Phage Integrase Family Protein; Integrase Bacteriophage

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MKAFKFTKATIDALSPAPEGKQVEYCDAMVQGLRLRVGATGSKSFSVAKRKEGRFIRATLGRYPALTIDMARAKALEILG
DVAMTGQNPNVIRREQDKLKVTLGEAIDAYLASRGDRIRSETAKHYRADLNNYSGDWMTISLLKLTREKIEVRHKAITEG
LPGSWHGAAREFRKAGTGKGSKAQADRWARTLRAVWRFARDHYRDANDRVMLPEPPTEVLSSKRLWHNNPRRNDRIRTHE
LRRWLDAVEQVRQYAIDWRDDTTATVCDAIDMALFTGLRRSEVFQLTWDRVSMSGGYFWIDKTKNGDPLELPITETLLTI
FRRRWHWNLKQSLFVFPGRNPDRPIHEPRRVIAKICAATVPHPNPDGLPPLEFKCHDARRTFGTVAELAEVGQYTIKRLM
NHRTLRSADVTQGYIHFTADELRKPATRIERDILEYAGRLNSCSE

Sequences:

>Translated_445_residues
MKAFKFTKATIDALSPAPEGKQVEYCDAMVQGLRLRVGATGSKSFSVAKRKEGRFIRATLGRYPALTIDMARAKALEILG
DVAMTGQNPNVIRREQDKLKVTLGEAIDAYLASRGDRIRSETAKHYRADLNNYSGDWMTISLLKLTREKIEVRHKAITEG
LPGSWHGAAREFRKAGTGKGSKAQADRWARTLRAVWRFARDHYRDANDRVMLPEPPTEVLSSKRLWHNNPRRNDRIRTHE
LRRWLDAVEQVRQYAIDWRDDTTATVCDAIDMALFTGLRRSEVFQLTWDRVSMSGGYFWIDKTKNGDPLELPITETLLTI
FRRRWHWNLKQSLFVFPGRNPDRPIHEPRRVIAKICAATVPHPNPDGLPPLEFKCHDARRTFGTVAELAEVGQYTIKRLM
NHRTLRSADVTQGYIHFTADELRKPATRIERDILEYAGRLNSCSE
>Mature_445_residues
MKAFKFTKATIDALSPAPEGKQVEYCDAMVQGLRLRVGATGSKSFSVAKRKEGRFIRATLGRYPALTIDMARAKALEILG
DVAMTGQNPNVIRREQDKLKVTLGEAIDAYLASRGDRIRSETAKHYRADLNNYSGDWMTISLLKLTREKIEVRHKAITEG
LPGSWHGAAREFRKAGTGKGSKAQADRWARTLRAVWRFARDHYRDANDRVMLPEPPTEVLSSKRLWHNNPRRNDRIRTHE
LRRWLDAVEQVRQYAIDWRDDTTATVCDAIDMALFTGLRRSEVFQLTWDRVSMSGGYFWIDKTKNGDPLELPITETLLTI
FRRRWHWNLKQSLFVFPGRNPDRPIHEPRRVIAKICAATVPHPNPDGLPPLEFKCHDARRTFGTVAELAEVGQYTIKRLM
NHRTLRSADVTQGYIHFTADELRKPATRIERDILEYAGRLNSCSE

Specific function: Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From The Host Genome. [C]

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51049; Mature: 51049

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAFKFTKATIDALSPAPEGKQVEYCDAMVQGLRLRVGATGSKSFSVAKRKEGRFIRATL
CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHEEEECCCCCCCHHHHHHHCCCEEEEHH
GRYPALTIDMARAKALEILGDVAMTGQNPNVIRREQDKLKVTLGEAIDAYLASRGDRIRS
CCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEHHHHHHHHHHHHCCHHHHH
ETAKHYRADLNNYSGDWMTISLLKLTREKIEVRHKAITEGLPGSWHGAAREFRKAGTGKG
HHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC
SKAQADRWARTLRAVWRFARDHYRDANDRVMLPEPPTEVLSSKRLWHNNPRRNDRIRTHE
CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHCCHHHCCCCCCCCCHHHHH
LRRWLDAVEQVRQYAIDWRDDTTATVCDAIDMALFTGLRRSEVFQLTWDRVSMSGGYFWI
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHEEEEEHHHEECCCCEEEE
DKTKNGDPLELPITETLLTIFRRRWHWNLKQSLFVFPGRNPDRPIHEPRRVIAKICAATV
ECCCCCCCEECCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCC
PHPNPDGLPPLEFKCHDARRTFGTVAELAEVGQYTIKRLMNHRTLRSADVTQGYIHFTAD
CCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHH
ELRKPATRIERDILEYAGRLNSCSE
HHHCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKAFKFTKATIDALSPAPEGKQVEYCDAMVQGLRLRVGATGSKSFSVAKRKEGRFIRATL
CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHEEEECCCCCCCHHHHHHHCCCEEEEHH
GRYPALTIDMARAKALEILGDVAMTGQNPNVIRREQDKLKVTLGEAIDAYLASRGDRIRS
CCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEHHHHHHHHHHHHCCHHHHH
ETAKHYRADLNNYSGDWMTISLLKLTREKIEVRHKAITEGLPGSWHGAAREFRKAGTGKG
HHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC
SKAQADRWARTLRAVWRFARDHYRDANDRVMLPEPPTEVLSSKRLWHNNPRRNDRIRTHE
CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHCCHHHCCCCCCCCCHHHHH
LRRWLDAVEQVRQYAIDWRDDTTATVCDAIDMALFTGLRRSEVFQLTWDRVSMSGGYFWI
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHEEEEEHHHEECCCCEEEE
DKTKNGDPLELPITETLLTIFRRRWHWNLKQSLFVFPGRNPDRPIHEPRRVIAKICAATV
ECCCCCCCEECCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCC
PHPNPDGLPPLEFKCHDARRTFGTVAELAEVGQYTIKRLMNHRTLRSADVTQGYIHFTAD
CCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHH
ELRKPATRIERDILEYAGRLNSCSE
HHHCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA