| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145300270
Identifier: 145300270
GI number: 145300270
Start: 3668979
End: 3670064
Strand: Direct
Name: 145300270
Synonym: ASA_3388
Alternate gene names: NA
Gene position: 3668979-3670064 (Clockwise)
Preceding gene: 145300265
Following gene: 145300275
Centisome position: 78.02
GC content: 59.48
Gene sequence:
>1086_bases GTGGACTCAGTCAGCCGCAGTTCAGCTTGCTGTCCTATCATCCCGAGCCATTTCATCCAACAGCTTGTTATTTCAGGAGT CTTACCGATGCGCACTCTCACCCTGCTGAGTCTTGGCCTGCTGGCAGCCAATGCCGCCCACGCCGATCTGGGGGAGATCC CCAAGCAGTCCGGCTGGTCCGGTTTCCTGCTCGGCGGGGTCAACGCCGTCAGCTACAAGTCCAACTTCTATGCGGGCGAT GACAGCAACAGCCGCATCAATGACCTCGGCTCTCCCGACAGTGAAAGCGGTCTGACTCCCCTCATCAACGCCGACATCCG TTACACCTTTGCCGACACCCGTACCCAGGTGTTTCTCGGCAACCTGATCCAGGATGCGATCCGCTTCGACTTCACCCAGC AGCTGGGTCTGCGTCAGGAGATGGGCGACAAGGGAATCGTCGCCACCTCCCTGGTGTTCAACGCCATGCCGGTCGAGCTG TGGAGCGATCCCTTCGCCACCAATGTGGATCGCAGCTCCACCGATGTGAAATCAAAAGGGGTTCGCTTCACCTGGGACAA GATCTGGGGCAGCAACTTCCACGGCAGCCTCACCAGCCGGGAAGTGGATCTGGATGAAGAGCGCAGCGGGCAGCAGTATG ACCTGACCCACGGCACCCACTATGCCTCCATGCTGGATCGCAACGGCAAGGTGCACGACATGGAGATCTCCTATCAGTGG CATTTTGGCGGCAACCAGCTGCTGGAGCCCGCGATCCTGTACAAGCAAGCCAGGCTTGATGGCAGCACCGAGAGCTTCAA GAACACGGGTCTGCAGCTGACCTACGCCAAGCGTGGCCCCCAGTGGTCCATCGTCAGCAACGTCTATGCCGGCAAGCGCA ACTATGACGAGGCGAATCCCATCTTCGGCCAGAGCGCCGATGCAAACGAGTTTGCCATCAACGGTACCTTCTTCTGGCAC AGTCTGTTCGGCGTCAAGGATCTCGCCGCCACCTTTACCGCGGCCTACTCCACCGCCAACTCCGACATCAGCTTCTACGA CAGTCAGGCCACCCGCGTCAGCACCGGCCTGCTCTACAACTTCTAA
Upstream 100 bases:
>100_bases ATTCGCCGAACAGAATACCAGCACGGAGCGCCGAACTCTTGTGCCGTCACGCTATTAATTATTGATTAACGCCATCTGCC AACTGGGATAGCATGCGTTG
Downstream 100 bases:
>100_bases ACCGGTCCATTCCAGCAACAACAAGGCCACCCCATGGGGTGGCCTTGGCATTTGTGCGCGTGGCTGACGTCAGATACCGA GCGAATCGAGCAGATCGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MDSVSRSSACCPIIPSHFIQQLVISGVLPMRTLTLLSLGLLAANAAHADLGEIPKQSGWSGFLLGGVNAVSYKSNFYAGD DSNSRINDLGSPDSESGLTPLINADIRYTFADTRTQVFLGNLIQDAIRFDFTQQLGLRQEMGDKGIVATSLVFNAMPVEL WSDPFATNVDRSSTDVKSKGVRFTWDKIWGSNFHGSLTSREVDLDEERSGQQYDLTHGTHYASMLDRNGKVHDMEISYQW HFGGNQLLEPAILYKQARLDGSTESFKNTGLQLTYAKRGPQWSIVSNVYAGKRNYDEANPIFGQSADANEFAINGTFFWH SLFGVKDLAATFTAAYSTANSDISFYDSQATRVSTGLLYNF
Sequences:
>Translated_361_residues MDSVSRSSACCPIIPSHFIQQLVISGVLPMRTLTLLSLGLLAANAAHADLGEIPKQSGWSGFLLGGVNAVSYKSNFYAGD DSNSRINDLGSPDSESGLTPLINADIRYTFADTRTQVFLGNLIQDAIRFDFTQQLGLRQEMGDKGIVATSLVFNAMPVEL WSDPFATNVDRSSTDVKSKGVRFTWDKIWGSNFHGSLTSREVDLDEERSGQQYDLTHGTHYASMLDRNGKVHDMEISYQW HFGGNQLLEPAILYKQARLDGSTESFKNTGLQLTYAKRGPQWSIVSNVYAGKRNYDEANPIFGQSADANEFAINGTFFWH SLFGVKDLAATFTAAYSTANSDISFYDSQATRVSTGLLYNF >Mature_361_residues MDSVSRSSACCPIIPSHFIQQLVISGVLPMRTLTLLSLGLLAANAAHADLGEIPKQSGWSGFLLGGVNAVSYKSNFYAGD DSNSRINDLGSPDSESGLTPLINADIRYTFADTRTQVFLGNLIQDAIRFDFTQQLGLRQEMGDKGIVATSLVFNAMPVEL WSDPFATNVDRSSTDVKSKGVRFTWDKIWGSNFHGSLTSREVDLDEERSGQQYDLTHGTHYASMLDRNGKVHDMEISYQW HFGGNQLLEPAILYKQARLDGSTESFKNTGLQLTYAKRGPQWSIVSNVYAGKRNYDEANPIFGQSADANEFAINGTFFWH SLFGVKDLAATFTAAYSTANSDISFYDSQATRVSTGLLYNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39808; Mature: 39808
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSVSRSSACCPIIPSHFIQQLVISGVLPMRTLTLLSLGLLAANAAHADLGEIPKQSGWS CCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCC GFLLGGVNAVSYKSNFYAGDDSNSRINDLGSPDSESGLTPLINADIRYTFADTRTQVFLG EEEECCCEEEEECCCEECCCCCCCCCCCCCCCCCCCCCCCEEECCEEEEECCCHHHHHHH NLIQDAIRFDFTQQLGLRQEMGDKGIVATSLVFNAMPVELWSDPFATNVDRSSTDVKSKG HHHHHHHHHHHHHHHCCHHHCCCCCEEEHHHHHHCCCHHHCCCCCCCCCCCCCCCHHHCC VRFTWDKIWGSNFHGSLTSREVDLDEERSGQQYDLTHGTHYASMLDRNGKVHDMEISYQW CEEEEHHHCCCCCCCCCCCCCCCCCHHCCCCEEECCCCHHHHHHHHCCCCEEEEEEEEEE HFGGNQLLEPAILYKQARLDGSTESFKNTGLQLTYAKRGPQWSIVSNVYAGKRNYDEANP ECCCCHHHHHHHHHHHHHCCCCHHHHHCCCEEEEEECCCCCEEHHHHHHCCCCCCCCCCC IFGQSADANEFAINGTFFWHSLFGVKDLAATFTAAYSTANSDISFYDSQATRVSTGLLYN CCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEECCEEEC F C >Mature Secondary Structure MDSVSRSSACCPIIPSHFIQQLVISGVLPMRTLTLLSLGLLAANAAHADLGEIPKQSGWS CCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCC GFLLGGVNAVSYKSNFYAGDDSNSRINDLGSPDSESGLTPLINADIRYTFADTRTQVFLG EEEECCCEEEEECCCEECCCCCCCCCCCCCCCCCCCCCCCEEECCEEEEECCCHHHHHHH NLIQDAIRFDFTQQLGLRQEMGDKGIVATSLVFNAMPVELWSDPFATNVDRSSTDVKSKG HHHHHHHHHHHHHHHCCHHHCCCCCEEEHHHHHHCCCHHHCCCCCCCCCCCCCCCHHHCC VRFTWDKIWGSNFHGSLTSREVDLDEERSGQQYDLTHGTHYASMLDRNGKVHDMEISYQW CEEEEHHHCCCCCCCCCCCCCCCCCHHCCCCEEECCCCHHHHHHHHCCCCEEEEEEEEEE HFGGNQLLEPAILYKQARLDGSTESFKNTGLQLTYAKRGPQWSIVSNVYAGKRNYDEANP ECCCCHHHHHHHHHHHHHCCCCHHHHHCCCEEEEEECCCCCEEHHHHHHCCCCCCCCCCC IFGQSADANEFAINGTFFWHSLFGVKDLAATFTAAYSTANSDISFYDSQATRVSTGLLYN CCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEECCEEEC F C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA