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The map label for this gene is arnF

Identifier: 145300202

GI number: 145300202

Start: 3581931

End: 3582377

Strand: Direct

Name: arnF

Synonym: ASA_3313

Alternate gene names: 145300202

Gene position: 3581931-3582377 (Clockwise)

Preceding gene: 145300201

Following gene: 145300203

Centisome position: 76.17

GC content: 62.19

Gene sequence:

>447_bases
ATGAGAGGTGACAATACCGGGGTTGGCAAAGAACCTGCGGTGACGGAGAGGCCCGCGATCAAGGGCTATCTCTATGTGCT
GGGCAGCATACTGCTGGTGACCCTGGCCCAGCTCGCCATGAAATGGGGAGTCATGCAGTTGCCAGCCTGGCAGGCCAGCC
TCGATATCATGCTGGCTCACCCGGTGCCGCTGCTGGTCATCACAGCCGGAGTGGGCTGCTATGCCCTGTCACTGCTCTGC
TGGCTGGCGGCGCTGCACTTCACCCCGCTCAATATCGCCTACCCCCTGCTCAGCACCAGCTATGCGCTTGTCTACCTGCT
GGCGGTCAGCATACCGAGCTTTGCCGAACCGCTGGAGCCGGGCAAGGCGGTGGGAGTGATCTTCATCCTGCTGGGGGCCG
TGCTGGTGGGGATAAAACCGGTGGGCAGGAAGCGCAACGCCCATTAA

Upstream 100 bases:

>100_bases
TGATTGGCTCGCGGCTGTTCTTTCACGAGCAGATCAGCTACCACAACTGGCTGGGGGCCGGCGCCATCATCATTGGCGCC
CTCTTGTTGGGAGGCTTGCT

Downstream 100 bases:

>100_bases
CCCATCACGGTTTGGCTCGCTATCCTCCCTGTGCAAGGGCTGCTTCGTCAGCCCTTTTCTTATGATGCGGATCCCTCTGC
TCACCCGGCTCATCTCCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: L-Ara4N-phosphoundecaprenol flippase subunit ArnF; Undecaprenyl phosphate-aminoarabinose flippase subunit ArnF

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MRGDNTGVGKEPAVTERPAIKGYLYVLGSILLVTLAQLAMKWGVMQLPAWQASLDIMLAHPVPLLVITAGVGCYALSLLC
WLAALHFTPLNIAYPLLSTSYALVYLLAVSIPSFAEPLEPGKAVGVIFILLGAVLVGIKPVGRKRNAH

Sequences:

>Translated_148_residues
MRGDNTGVGKEPAVTERPAIKGYLYVLGSILLVTLAQLAMKWGVMQLPAWQASLDIMLAHPVPLLVITAGVGCYALSLLC
WLAALHFTPLNIAYPLLSTSYALVYLLAVSIPSFAEPLEPGKAVGVIFILLGAVLVGIKPVGRKRNAH
>Mature_148_residues
MRGDNTGVGKEPAVTERPAIKGYLYVLGSILLVTLAQLAMKWGVMQLPAWQASLDIMLAHPVPLLVITAGVGCYALSLLC
WLAALHFTPLNIAYPLLSTSYALVYLLAVSIPSFAEPLEPGKAVGVIFILLGAVLVGIKPVGRKRNAH

Specific function: Translocates 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ArnF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ARNF_AERS4 (A4SQX3)

Other databases:

- EMBL:   CP000644
- RefSeq:   YP_001143043.1
- STRING:   A4SQX3
- GeneID:   4998028
- GenomeReviews:   CP000644_GR
- KEGG:   asa:ASA_3313
- eggNOG:   COG0697
- HOGENOM:   HBG682839
- OMA:   CWLAALR
- ProtClustDB:   CLSK729060
- BioCyc:   ASAL382245:ASA_3313-MONOMER
- GO:   GO:0006810
- HAMAP:   MF_00538
- InterPro:   IPR022832

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15760; Mature: 15760

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x133ec99c)-; HASH(0x133b8390)-; HASH(0x131b52b0)-; HASH(0x405f058c)-;

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGDNTGVGKEPAVTERPAIKGYLYVLGSILLVTLAQLAMKWGVMQLPAWQASLDIMLAH
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEECC
PVPLLVITAGVGCYALSLLCWLAALHFTPLNIAYPLLSTSYALVYLLAVSIPSFAEPLEP
CCCEEHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCC
GKAVGVIFILLGAVLVGIKPVGRKRNAH
CHHHHHHHHHHHHHHHCCCCCCCCCCCH
>Mature Secondary Structure
MRGDNTGVGKEPAVTERPAIKGYLYVLGSILLVTLAQLAMKWGVMQLPAWQASLDIMLAH
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEECC
PVPLLVITAGVGCYALSLLCWLAALHFTPLNIAYPLLSTSYALVYLLAVSIPSFAEPLEP
CCCEEHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCC
GKAVGVIFILLGAVLVGIKPVGRKRNAH
CHHHHHHHHHHHHHHHCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA