| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145300141
Identifier: 145300141
GI number: 145300141
Start: 3508603
End: 3509502
Strand: Direct
Name: 145300141
Synonym: ASA_3244
Alternate gene names: NA
Gene position: 3508603-3509502 (Clockwise)
Preceding gene: 145300140
Following gene: 145300142
Centisome position: 74.61
GC content: 66.22
Gene sequence:
>900_bases ATGTCGGGTTCTTCGTGGTGGGACAAGTCCACCGGCCTTGCGCTGTTGACCATACTGCTGTGGGCCTCGCTGGCGGCGCT CACCTCCCGGGTCACCAGCGTGTCGCCACTGGTGCTGGTGGGCCTGGTGCTGTTTTTCTGTGGCGTCGGCGCCCTGCCGT TCTGGCGCCAGTGGCGGGCCCGTCCGGTCAGCTGGCTGGTGACCATCACAGCGCTGCTGCTCTATCACCTGCTGCTGTTC ATGAGCTTTCGGCACGCCCCCGTGCTGGAGGCGAACCTCATCAACTACCTCTGGCCCCTCTTCATCATACTGTTCACCCC CTTGCTGCTGCCCGGTCACCCGCTGCACAGCCGTCACTTGCTGGCCGGCGCGCTCGGTCTGGCCGGATCCGTACTGGTGA TGGTCAACGGCGAGTTGCAACTGCAGGTCGCCTATCTGCCTGGCTACCTGCTGGCACTGGGTGCCGCCATCATCTGGGGG GCCTATTCGGTGCTCTCCCGCCGTCTGCCACCTGCACCGGCCGTGGTGACGGCTGCGGCCTGCCTGCCCGCCGGACTACT GGCGTTGCTGCTCGCCTGGTGGCTGGAAGGGCCGCTGCCCATTGCGCAGATCCCCGCCGACGACTGGTGGCTCATCGTCG GGCTCGCCCTCGGCCCCATGGGTGCGGCCTTCGTTACCTGGTATCTGGCATTGCGGGACGGGGATCCGCGCCGCATCGGG GCGCTTGCCTACCTGACACCGCTGCTGAGTACACTGTTGCTGGTGCTGCTCAACGGAGAGGAGCTGACTTCCCGCCATCT GCTGGCCGGTGCCTTCATCATGGGTGGGGCCCTGCTTGGCATGCTGGGCAAGTCACCTGCGGCCCGCAAGCAGGAGGAGC CCGCATCATCATTGTCATGA
Upstream 100 bases:
>100_bases TCGACAACCAGACCAAAACAGGGATGGTCAGGAGGGAGGGTCAGTCTGCTAGACTGGCCCTCTTTTTATTCATCTTATTC ATCTTGCAAAGGAGTGTTGG
Downstream 100 bases:
>100_bases CTTCGCAGTCATGAACCGGATGTCATAAAAACGCCATCTTTCCTGCTTAAGCTCACGGCGACTTCCAGTCCCCTGGCTCA AGCAGGAATCCTGACGTGAA
Product: integral membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MSGSSWWDKSTGLALLTILLWASLAALTSRVTSVSPLVLVGLVLFFCGVGALPFWRQWRARPVSWLVTITALLLYHLLLF MSFRHAPVLEANLINYLWPLFIILFTPLLLPGHPLHSRHLLAGALGLAGSVLVMVNGELQLQVAYLPGYLLALGAAIIWG AYSVLSRRLPPAPAVVTAAACLPAGLLALLLAWWLEGPLPIAQIPADDWWLIVGLALGPMGAAFVTWYLALRDGDPRRIG ALAYLTPLLSTLLLVLLNGEELTSRHLLAGAFIMGGALLGMLGKSPAARKQEEPASSLS
Sequences:
>Translated_299_residues MSGSSWWDKSTGLALLTILLWASLAALTSRVTSVSPLVLVGLVLFFCGVGALPFWRQWRARPVSWLVTITALLLYHLLLF MSFRHAPVLEANLINYLWPLFIILFTPLLLPGHPLHSRHLLAGALGLAGSVLVMVNGELQLQVAYLPGYLLALGAAIIWG AYSVLSRRLPPAPAVVTAAACLPAGLLALLLAWWLEGPLPIAQIPADDWWLIVGLALGPMGAAFVTWYLALRDGDPRRIG ALAYLTPLLSTLLLVLLNGEELTSRHLLAGAFIMGGALLGMLGKSPAARKQEEPASSLS >Mature_298_residues SGSSWWDKSTGLALLTILLWASLAALTSRVTSVSPLVLVGLVLFFCGVGALPFWRQWRARPVSWLVTITALLLYHLLLFM SFRHAPVLEANLINYLWPLFIILFTPLLLPGHPLHSRHLLAGALGLAGSVLVMVNGELQLQVAYLPGYLLALGAAIIWGA YSVLSRRLPPAPAVVTAAACLPAGLLALLLAWWLEGPLPIAQIPADDWWLIVGLALGPMGAAFVTWYLALRDGDPRRIGA LAYLTPLLSTLLLVLLNGEELTSRHLLAGAFIMGGALLGMLGKSPAARKQEEPASSLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32126; Mature: 31995
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGSSWWDKSTGLALLTILLWASLAALTSRVTSVSPLVLVGLVLFFCGVGALPFWRQWRA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHC RPVSWLVTITALLLYHLLLFMSFRHAPVLEANLINYLWPLFIILFTPLLLPGHPLHSRHL CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH LAGALGLAGSVLVMVNGELQLQVAYLPGYLLALGAAIIWGAYSVLSRRLPPAPAVVTAAA HHHHHHHCCCEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH CLPAGLLALLLAWWLEGPLPIAQIPADDWWLIVGLALGPMGAAFVTWYLALRDGDPRRIG HHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHH ALAYLTPLLSTLLLVLLNGEELTSRHLLAGAFIMGGALLGMLGKSPAARKQEEPASSLS HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure SGSSWWDKSTGLALLTILLWASLAALTSRVTSVSPLVLVGLVLFFCGVGALPFWRQWRA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHC RPVSWLVTITALLLYHLLLFMSFRHAPVLEANLINYLWPLFIILFTPLLLPGHPLHSRHL CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH LAGALGLAGSVLVMVNGELQLQVAYLPGYLLALGAAIIWGAYSVLSRRLPPAPAVVTAAA HHHHHHHCCCEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH CLPAGLLALLLAWWLEGPLPIAQIPADDWWLIVGLALGPMGAAFVTWYLALRDGDPRRIG HHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHH ALAYLTPLLSTLLLVLLNGEELTSRHLLAGAFIMGGALLGMLGKSPAARKQEEPASSLS HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA