| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145299658
Identifier: 145299658
GI number: 145299658
Start: 2929663
End: 2931255
Strand: Direct
Name: 145299658
Synonym: ASA_2732
Alternate gene names: NA
Gene position: 2929663-2931255 (Clockwise)
Preceding gene: 145299657
Following gene: 145299662
Centisome position: 62.3
GC content: 63.15
Gene sequence:
>1593_bases ATGCTGGCTCGTACCCGTCGCCTCCTTCGCCGCTCTCTTCTGACCCTCTTGCTTGCGCTGCTGGCCGCTTGGGGGGTGAT CGCCTACTTCGCCTGGCAAGCCGCGCCGTTGCAGCTGTGGCATACCTTTATTCCCCCCGAGCTCAGCGCCGACGAACTGG ATAGCAGCGACTGGCCAGCCTATCTGGCTCGCGAGCAACAGCTGTTCGATCTGGTGGAGCAGGAGGTGGTCGCCAAGACG CCGCCGGAGCAACAGCTGGCGGGCAACCGCTACTATCAGGGCTCGCCCATCAATCCAGCCCACTTTCAAGACGACTGGAA TCGCTCCTACCTGCTGCGCCCCGAGGGCGAGGTGAAAGGGGTAGCCGTGTTCCTGCATGGCCTGACCGATTCCCCTTACA GCCTGCGCCATCTGGCCCAGCGCTATCGCGAGCAGGGCTTTATCGCCCTTGGTTTGCGCATACCCGGTCACGGCACAGTG CCGGCCGGGCTGGTCAATATGGAGTGGGAGACCTGGCTGGCGGCCACACGACTGGCGGTGCGCGAGGCCAGAGCACAAGC CCCGAGCCCGCTGCCACTGCATCTGGTGGGTTTTTCCAACGGCGGCGCGCTGGCGGTGAAATATGCGCTGGATGCGCTGG AAGACAAAACGGGGACATTGGCAAGGCCGGATCGGCTGGTGCTCATCTCCCCCATGATAGGGGTGACCCGCTTTGCCCGT TTCGCCGGATTGAAGGCGGTGCCCGCCCTGCTGCCCGCCTTTGCCAACGCGGCCTGGCTCGGCATCATGCCCGAATTCAA CCCGTTCAAATACAACTCCTTCCCGGTCAACGGGGCACGTCAATCCTACCGGCTGACCCACACCATTCAACAGCAGGTGC GCCAACTGGCGACCAGCGGTGAACTGGCGGCCTTCCCGCCGGCACTCACCTTCCAGTCGGTGATGGATTACACAGTCAGC ACCCGCTCCATCATCGCCGATCTCTACCACTTCCTGCCGAACAACGGCAGCGAGCTGGTGCTGTTCGACATCAATCGCGG CTCTGTTTTCGGCCCCTTGCTCAACAGTGCCTCCGAGCTGGCCCTAAGCCACCTGCTGCCGAGCCAGCCCCAGCCATATC GGCTGACAGTGGTGGGCAACGAGGCGGCGTCCAGCCCCCAGACCCAGGCAAAAACGATGGTCGCAGGCAGCACGCTCGAG CAAGTTCGCCCCCTTGGCATCGACTACCCCAAGGAGATCTACTCCCTCTCCCACGTGGCGCTGCCCTTCCCCATGGACGA TCCCCTCTATGGCATGGCGCCACGCCCCGAGCAGATGAACCAATACGGCATCAACCTGGGCGGCCTGGCCCTGCGCGGGG AGCGCGGTATGTTGATCGTCAATCCAGGTGCCCTCACCCGCACCTCCTCCAACCCCTTCTATCCCTATCTGCAAGAGAGG GTCATTGAGACACTGGCGGCGCCCCTTCAGCCCCCATCGCCACTCGCCTCACCCCAGGCGAAACCGGCCAGCGACAAGCG CACCGATGCCGCCTATGAGGCAGAGATAGAGACGTTTTTACAGGAAACAGACACGCCGGATTTACCTTTTTAG
Upstream 100 bases:
>100_bases AGGCTTTAAGCCTTGCGTCAAGGTTTGAACTGTTCAGACAGACACGGCGAGCCAGCTTGACTGCGGTTCGCCCCGACCGC CATCGCCCAGGGATCACACC
Downstream 100 bases:
>100_bases GCAAGCGACAAGAAGCAGGAGTTGGCAATCAGCTGGCCGTCGGGCTCAAGGGTAGCGGCTGATCTCGACAAGATTCTGAT CCGGGTCGAGGCAATAGATT
Product: lysophospholipase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 530; Mature: 530
Protein sequence:
>530_residues MLARTRRLLRRSLLTLLLALLAAWGVIAYFAWQAAPLQLWHTFIPPELSADELDSSDWPAYLAREQQLFDLVEQEVVAKT PPEQQLAGNRYYQGSPINPAHFQDDWNRSYLLRPEGEVKGVAVFLHGLTDSPYSLRHLAQRYREQGFIALGLRIPGHGTV PAGLVNMEWETWLAATRLAVREARAQAPSPLPLHLVGFSNGGALAVKYALDALEDKTGTLARPDRLVLISPMIGVTRFAR FAGLKAVPALLPAFANAAWLGIMPEFNPFKYNSFPVNGARQSYRLTHTIQQQVRQLATSGELAAFPPALTFQSVMDYTVS TRSIIADLYHFLPNNGSELVLFDINRGSVFGPLLNSASELALSHLLPSQPQPYRLTVVGNEAASSPQTQAKTMVAGSTLE QVRPLGIDYPKEIYSLSHVALPFPMDDPLYGMAPRPEQMNQYGINLGGLALRGERGMLIVNPGALTRTSSNPFYPYLQER VIETLAAPLQPPSPLASPQAKPASDKRTDAAYEAEIETFLQETDTPDLPF
Sequences:
>Translated_530_residues MLARTRRLLRRSLLTLLLALLAAWGVIAYFAWQAAPLQLWHTFIPPELSADELDSSDWPAYLAREQQLFDLVEQEVVAKT PPEQQLAGNRYYQGSPINPAHFQDDWNRSYLLRPEGEVKGVAVFLHGLTDSPYSLRHLAQRYREQGFIALGLRIPGHGTV PAGLVNMEWETWLAATRLAVREARAQAPSPLPLHLVGFSNGGALAVKYALDALEDKTGTLARPDRLVLISPMIGVTRFAR FAGLKAVPALLPAFANAAWLGIMPEFNPFKYNSFPVNGARQSYRLTHTIQQQVRQLATSGELAAFPPALTFQSVMDYTVS TRSIIADLYHFLPNNGSELVLFDINRGSVFGPLLNSASELALSHLLPSQPQPYRLTVVGNEAASSPQTQAKTMVAGSTLE QVRPLGIDYPKEIYSLSHVALPFPMDDPLYGMAPRPEQMNQYGINLGGLALRGERGMLIVNPGALTRTSSNPFYPYLQER VIETLAAPLQPPSPLASPQAKPASDKRTDAAYEAEIETFLQETDTPDLPF >Mature_530_residues MLARTRRLLRRSLLTLLLALLAAWGVIAYFAWQAAPLQLWHTFIPPELSADELDSSDWPAYLAREQQLFDLVEQEVVAKT PPEQQLAGNRYYQGSPINPAHFQDDWNRSYLLRPEGEVKGVAVFLHGLTDSPYSLRHLAQRYREQGFIALGLRIPGHGTV PAGLVNMEWETWLAATRLAVREARAQAPSPLPLHLVGFSNGGALAVKYALDALEDKTGTLARPDRLVLISPMIGVTRFAR FAGLKAVPALLPAFANAAWLGIMPEFNPFKYNSFPVNGARQSYRLTHTIQQQVRQLATSGELAAFPPALTFQSVMDYTVS TRSIIADLYHFLPNNGSELVLFDINRGSVFGPLLNSASELALSHLLPSQPQPYRLTVVGNEAASSPQTQAKTMVAGSTLE QVRPLGIDYPKEIYSLSHVALPFPMDDPLYGMAPRPEQMNQYGINLGGLALRGERGMLIVNPGALTRTSSNPFYPYLQER VIETLAAPLQPPSPLASPQAKPASDKRTDAAYEAEIETFLQETDTPDLPF
Specific function: Unknown
COG id: COG2267
COG function: function code I; Lysophospholipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58474; Mature: 58474
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLARTRRLLRRSLLTLLLALLAAWGVIAYFAWQAAPLQLWHTFIPPELSADELDSSDWPA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHCCCCCCCH YLAREQQLFDLVEQEVVAKTPPEQQLAGNRYYQGSPINPAHFQDDWNRSYLLRPEGEVKG HHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEECCCCCCCCCCCCCCCCEEEECCCCCCCE VAVFLHGLTDSPYSLRHLAQRYREQGFIALGLRIPGHGTVPAGLVNMEWETWLAATRLAV EEEEEECCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEECCHHHHHHHHHHHH REARAQAPSPLPLHLVGFSNGGALAVKYALDALEDKTGTLARPDRLVLISPMIGVTRFAR HHHHHCCCCCCEEEEEEECCCCEEEEHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHH FAGLKAVPALLPAFANAAWLGIMPEFNPFKYNSFPVNGARQSYRLTHTIQQQVRQLATSG HHCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC ELAAFPPALTFQSVMDYTVSTRSIIADLYHFLPNNGSELVLFDINRGSVFGPLLNSASEL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHCCHHHH ALSHLLPSQPQPYRLTVVGNEAASSPQTQAKTMVAGSTLEQVRPLGIDYPKEIYSLSHVA HHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHEE LPFPMDDPLYGMAPRPEQMNQYGINLGGLALRGERGMLIVNPGALTRTSSNPFYPYLQER ECCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCEEEECCCCEEECCCCCCCHHHHHH VIETLAAPLQPPSPLASPQAKPASDKRTDAAYEAEIETFLQETDTPDLPF HHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLARTRRLLRRSLLTLLLALLAAWGVIAYFAWQAAPLQLWHTFIPPELSADELDSSDWPA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHCCCCCCCH YLAREQQLFDLVEQEVVAKTPPEQQLAGNRYYQGSPINPAHFQDDWNRSYLLRPEGEVKG HHHHHHHHHHHHHHHHHHCCCCHHHHCCCCEECCCCCCCCCCCCCCCCEEEECCCCCCCE VAVFLHGLTDSPYSLRHLAQRYREQGFIALGLRIPGHGTVPAGLVNMEWETWLAATRLAV EEEEEECCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEECCHHHHHHHHHHHH REARAQAPSPLPLHLVGFSNGGALAVKYALDALEDKTGTLARPDRLVLISPMIGVTRFAR HHHHHCCCCCCEEEEEEECCCCEEEEHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHH FAGLKAVPALLPAFANAAWLGIMPEFNPFKYNSFPVNGARQSYRLTHTIQQQVRQLATSG HHCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC ELAAFPPALTFQSVMDYTVSTRSIIADLYHFLPNNGSELVLFDINRGSVFGPLLNSASEL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHCCHHHH ALSHLLPSQPQPYRLTVVGNEAASSPQTQAKTMVAGSTLEQVRPLGIDYPKEIYSLSHVA HHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHEE LPFPMDDPLYGMAPRPEQMNQYGINLGGLALRGERGMLIVNPGALTRTSSNPFYPYLQER ECCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCEEEECCCCEEECCCCCCCHHHHHH VIETLAAPLQPPSPLASPQAKPASDKRTDAAYEAEIETFLQETDTPDLPF HHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA