Definition Aeromonas salmonicida subsp. salmonicida A449, complete genome.
Accession NC_009348
Length 4,702,402

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The map label for this gene is 145299640

Identifier: 145299640

GI number: 145299640

Start: 2913008

End: 2913613

Strand: Direct

Name: 145299640

Synonym: ASA_2714

Alternate gene names: NA

Gene position: 2913008-2913613 (Clockwise)

Preceding gene: 145299639

Following gene: 145299641

Centisome position: 61.95

GC content: 51.32

Gene sequence:

>606_bases
ATGCATACCATCGCCATTGTTCTTTTTGACGATTTTACCGACATCGATTTTTTCTTGATAAAAGACATTCTTGGCAGAAC
CAGGCACGACTGGGTGGTGAAAGTACTGGGCACCAAGCCAAGCCACCATTCCGTACTGGGTAACACTGTCACCACCGATG
ACCATCTTATGGCAGCTAATGATGCCGACGCCGTCATTTTCTGTAGCGGACAACAAGGTATTCCGGCCGTGCTGGCCGAC
CCGCAATTTATGTCCTCTTTCAAACTGGATCCTGCAAAACAGTTGATTGGTTCGATCTGCGCAGGCTCCTTTATTTTGGC
GAAACTGGGTCTGCTCGATGGCAAGCAAGCCACGACTCATCCGGATGCCAAGCCCGCCCTGCTCACCTTGGGAGTAGATG
TGCAAGATAAACCACTGGTGGTCGAGGGCAATATCGCCACCGCAGGAGGTTGTCTATCATCGATCTATCTGACCGGCTGG
TTAGCCGAAAGACTCTGCAATACCGCCAAACGTCGCGAGATTCACCGGCAACTCCTGCCAGCTGGACAAGCGGATATCTA
TGAAGAACTGATCCAGTCATCAATTGCTGCAGCCTGTCGCAGCTAA

Upstream 100 bases:

>100_bases
AATTGATCCCTTGGGAACGACTGGAAAGCCATGGTGAAGAATTCAAATAGCCAACTCCCACTATCGCTCATTCCCCCAGA
CAAAACAGCAGGAAGCTCGG

Downstream 100 bases:

>100_bases
CTCATAATATTGTGCAGCGACGCCAACGGAGATAACCCATATGAAAACCCATGAAAAACTGAACTATGTGGAGTTTGCGG
CCAGTGATCTCGCGGCCACC

Product: intracellular protease/amidase

Products: NA

Alternate protein names: DJ-1/PfpI Family Protein; ThiJ/PfpI Family Protein; ThiJ/PfpI Domain Protein; Transcriptional Regulator; Intracellular Protease/Amidase; AraC Family Transcription Regulator; Transcriptional Regulator AraC Family; DJ-1/PfpI Family; AraC-Family Transcriptional Regulator; AraC Family Transcriptional Regulator

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MHTIAIVLFDDFTDIDFFLIKDILGRTRHDWVVKVLGTKPSHHSVLGNTVTTDDHLMAANDADAVIFCSGQQGIPAVLAD
PQFMSSFKLDPAKQLIGSICAGSFILAKLGLLDGKQATTHPDAKPALLTLGVDVQDKPLVVEGNIATAGGCLSSIYLTGW
LAERLCNTAKRREIHRQLLPAGQADIYEELIQSSIAAACRS

Sequences:

>Translated_201_residues
MHTIAIVLFDDFTDIDFFLIKDILGRTRHDWVVKVLGTKPSHHSVLGNTVTTDDHLMAANDADAVIFCSGQQGIPAVLAD
PQFMSSFKLDPAKQLIGSICAGSFILAKLGLLDGKQATTHPDAKPALLTLGVDVQDKPLVVEGNIATAGGCLSSIYLTGW
LAERLCNTAKRREIHRQLLPAGQADIYEELIQSSIAAACRS
>Mature_201_residues
MHTIAIVLFDDFTDIDFFLIKDILGRTRHDWVVKVLGTKPSHHSVLGNTVTTDDHLMAANDADAVIFCSGQQGIPAVLAD
PQFMSSFKLDPAKQLIGSICAGSFILAKLGLLDGKQATTHPDAKPALLTLGVDVQDKPLVVEGNIATAGGCLSSIYLTGW
LAERLCNTAKRREIHRQLLPAGQADIYEELIQSSIAAACRS

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21622; Mature: 21622

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTIAIVLFDDFTDIDFFLIKDILGRTRHDWVVKVLGTKPSHHSVLGNTVTTDDHLMAAN
CCEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHCCCCCCCCCCEEECC
DADAVIFCSGQQGIPAVLADPQFMSSFKLDPAKQLIGSICAGSFILAKLGLLDGKQATTH
CCCEEEEECCCCCCCEEEECHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDAKPALLTLGVDVQDKPLVVEGNIATAGGCLSSIYLTGWLAERLCNTAKRREIHRQLLP
CCCCCEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AGQADIYEELIQSSIAAACRS
CCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHTIAIVLFDDFTDIDFFLIKDILGRTRHDWVVKVLGTKPSHHSVLGNTVTTDDHLMAAN
CCEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHCCCCCCCCCCEEECC
DADAVIFCSGQQGIPAVLADPQFMSSFKLDPAKQLIGSICAGSFILAKLGLLDGKQATTH
CCCEEEEECCCCCCCEEEECHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDAKPALLTLGVDVQDKPLVVEGNIATAGGCLSSIYLTGWLAERLCNTAKRREIHRQLLP
CCCCCEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AGQADIYEELIQSSIAAACRS
CCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA