| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145299640
Identifier: 145299640
GI number: 145299640
Start: 2913008
End: 2913613
Strand: Direct
Name: 145299640
Synonym: ASA_2714
Alternate gene names: NA
Gene position: 2913008-2913613 (Clockwise)
Preceding gene: 145299639
Following gene: 145299641
Centisome position: 61.95
GC content: 51.32
Gene sequence:
>606_bases ATGCATACCATCGCCATTGTTCTTTTTGACGATTTTACCGACATCGATTTTTTCTTGATAAAAGACATTCTTGGCAGAAC CAGGCACGACTGGGTGGTGAAAGTACTGGGCACCAAGCCAAGCCACCATTCCGTACTGGGTAACACTGTCACCACCGATG ACCATCTTATGGCAGCTAATGATGCCGACGCCGTCATTTTCTGTAGCGGACAACAAGGTATTCCGGCCGTGCTGGCCGAC CCGCAATTTATGTCCTCTTTCAAACTGGATCCTGCAAAACAGTTGATTGGTTCGATCTGCGCAGGCTCCTTTATTTTGGC GAAACTGGGTCTGCTCGATGGCAAGCAAGCCACGACTCATCCGGATGCCAAGCCCGCCCTGCTCACCTTGGGAGTAGATG TGCAAGATAAACCACTGGTGGTCGAGGGCAATATCGCCACCGCAGGAGGTTGTCTATCATCGATCTATCTGACCGGCTGG TTAGCCGAAAGACTCTGCAATACCGCCAAACGTCGCGAGATTCACCGGCAACTCCTGCCAGCTGGACAAGCGGATATCTA TGAAGAACTGATCCAGTCATCAATTGCTGCAGCCTGTCGCAGCTAA
Upstream 100 bases:
>100_bases AATTGATCCCTTGGGAACGACTGGAAAGCCATGGTGAAGAATTCAAATAGCCAACTCCCACTATCGCTCATTCCCCCAGA CAAAACAGCAGGAAGCTCGG
Downstream 100 bases:
>100_bases CTCATAATATTGTGCAGCGACGCCAACGGAGATAACCCATATGAAAACCCATGAAAAACTGAACTATGTGGAGTTTGCGG CCAGTGATCTCGCGGCCACC
Product: intracellular protease/amidase
Products: NA
Alternate protein names: DJ-1/PfpI Family Protein; ThiJ/PfpI Family Protein; ThiJ/PfpI Domain Protein; Transcriptional Regulator; Intracellular Protease/Amidase; AraC Family Transcription Regulator; Transcriptional Regulator AraC Family; DJ-1/PfpI Family; AraC-Family Transcriptional Regulator; AraC Family Transcriptional Regulator
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MHTIAIVLFDDFTDIDFFLIKDILGRTRHDWVVKVLGTKPSHHSVLGNTVTTDDHLMAANDADAVIFCSGQQGIPAVLAD PQFMSSFKLDPAKQLIGSICAGSFILAKLGLLDGKQATTHPDAKPALLTLGVDVQDKPLVVEGNIATAGGCLSSIYLTGW LAERLCNTAKRREIHRQLLPAGQADIYEELIQSSIAAACRS
Sequences:
>Translated_201_residues MHTIAIVLFDDFTDIDFFLIKDILGRTRHDWVVKVLGTKPSHHSVLGNTVTTDDHLMAANDADAVIFCSGQQGIPAVLAD PQFMSSFKLDPAKQLIGSICAGSFILAKLGLLDGKQATTHPDAKPALLTLGVDVQDKPLVVEGNIATAGGCLSSIYLTGW LAERLCNTAKRREIHRQLLPAGQADIYEELIQSSIAAACRS >Mature_201_residues MHTIAIVLFDDFTDIDFFLIKDILGRTRHDWVVKVLGTKPSHHSVLGNTVTTDDHLMAANDADAVIFCSGQQGIPAVLAD PQFMSSFKLDPAKQLIGSICAGSFILAKLGLLDGKQATTHPDAKPALLTLGVDVQDKPLVVEGNIATAGGCLSSIYLTGW LAERLCNTAKRREIHRQLLPAGQADIYEELIQSSIAAACRS
Specific function: Unknown
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21622; Mature: 21622
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTIAIVLFDDFTDIDFFLIKDILGRTRHDWVVKVLGTKPSHHSVLGNTVTTDDHLMAAN CCEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHCCCCCCCCCCEEECC DADAVIFCSGQQGIPAVLADPQFMSSFKLDPAKQLIGSICAGSFILAKLGLLDGKQATTH CCCEEEEECCCCCCCEEEECHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PDAKPALLTLGVDVQDKPLVVEGNIATAGGCLSSIYLTGWLAERLCNTAKRREIHRQLLP CCCCCEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AGQADIYEELIQSSIAAACRS CCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHTIAIVLFDDFTDIDFFLIKDILGRTRHDWVVKVLGTKPSHHSVLGNTVTTDDHLMAAN CCEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHCCCCCCCCCCEEECC DADAVIFCSGQQGIPAVLADPQFMSSFKLDPAKQLIGSICAGSFILAKLGLLDGKQATTH CCCEEEEECCCCCCCEEEECHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PDAKPALLTLGVDVQDKPLVVEGNIATAGGCLSSIYLTGWLAERLCNTAKRREIHRQLLP CCCCCEEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AGQADIYEELIQSSIAAACRS CCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA