| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is lysC [H]
Identifier: 145299511
GI number: 145299511
Start: 2755587
End: 2756939
Strand: Direct
Name: lysC [H]
Synonym: ASA_2578
Alternate gene names: 145299511
Gene position: 2755587-2756939 (Clockwise)
Preceding gene: 145299510
Following gene: 145299513
Centisome position: 58.6
GC content: 64.45
Gene sequence:
>1353_bases ATGAGCCCGATGAATGTCGCCAAGTTTGGCGGAACCAGTGTCGCCAATGCCGCGGCCATGAACAACTGCGCCAATGTGGT ACTGGCCAATCCGGCAACCCGGGTGGTGGTACTGAGCGCCAGCGCCGGCGTCACCAATCTGCTGGTGGCACTGGCCCAGG GCGATCTGGACGAGGCAGGCCAGGAGGCACAGCTGGCCAAACTGGCCGAGATCCAGCAGGCCATACTGACGGCACTGGGC GATCCCGCCGACGTGAGTACCCTGATCCATGCCACCCTCGGCGAGATCCGCACCATGGCCCGCCAGGCCAGTCAGCATAC GGATGCAGAGCTGGCTGACAGGCTCATCGCCTGTGGCGAGCTGATGTCTACCCGCCTCTTCACCGAGCTGTTGCACCAGC GTGGTATCAAGGCCCACTGGCAGGATGTGCGCCAGCTGATGCGCACCGACAGCCGCTTTGGCAAGGCGACCGTGGATCTC GGTGCCACTCGCGGCCTCTGCCAACAGGCGCTGGGGCCCCTGCTCGGCGACAGCCTCATCATCACTCAGGGCTTCATCGG CTCGGATGCCGATGGCCGCACCACCACGCTTGGTCGCGGCGGCTCCGATTACAGCGCCGCCCTGCTCGCCGAAGCGCTGG ATGCGGGCAGCATAGAGATCTGGACCGATGTGCCCGGCATCTACACCACGGATCCGCGACTGGTGACACGCGCACGCCCC ATTCCTGAAATAAGCTTCGTGGAAGCGGCTGAGATGGCTACCTTTGGCGCCAAGGTGCTGCACCCGGCCACCCTGCAACC TGCGGTGCGCCAGGACATTCCTGTCTTTGTCGGCTCCAGCAAGGATCCCGCCGCCGGCGGCACCTGGATCCGCGCCAGCA CCAGCACCAACCCGCTGTTTCGCGCCGTGGCATTGCGCCGCCAGCAAGTGCTGGTCACACTGCACAGCCTCAACATGTTC CACGCCTACGGCTTCCTGGCCGAGGTGTTCGGCATCCTGGCCCGCCACCGCATCTCGGTGGATCTCATCACCACCTCGGA AGTGAGCGTGTCGCTCACCCTGGATCACACCGGCAGCCAGAGCAACGGCGAGCCCGTGCTCAGCGACAAGGTGCTGGCCG AGCTGGGTCAGCTGTGCAAGGTGAAGGTGGAAACCGGTCTGGCACTGGTGGCGCTCATCGGCAACCGCATGAGCGAGGCG GCCGGTGTAGGCAGTCAGGTCTTTGACGCCATTCGCGAGCACAACATCCGCATGATCTGTTATGGCGCCAGTGCCCACAA TCTCTGCTTCCTGGTCAAGGAAGAAGAAGCGGGCCACATCGTCAACCGCCTCCACCAGGAGCTGCTCGACTGA
Upstream 100 bases:
>100_bases CTTCTGGCCGGGATAGCTTCTCTCATTCCTGCCATTTTCAGCCTCCTCCTCTCTTTTTGCCCGATGGAACCGGATTTTTA TATTAAGACAGGAGTAAGCA
Downstream 100 bases:
>100_bases GCCAGCCAAGGTTTGACACGGCATAAAAGAGGGGCACTCAGGGTGCCCCTCTTGTCGTTGATGCCCATGTCATTGATGCA GATACCAGCCCCTACCCTAC
Product: aspartate kinase III
Products: NA
Alternate protein names: Aspartate kinase III; AKIII; Lysine-sensitive aspartokinase III [H]
Number of amino acids: Translated: 450; Mature: 449
Protein sequence:
>450_residues MSPMNVAKFGGTSVANAAAMNNCANVVLANPATRVVVLSASAGVTNLLVALAQGDLDEAGQEAQLAKLAEIQQAILTALG DPADVSTLIHATLGEIRTMARQASQHTDAELADRLIACGELMSTRLFTELLHQRGIKAHWQDVRQLMRTDSRFGKATVDL GATRGLCQQALGPLLGDSLIITQGFIGSDADGRTTTLGRGGSDYSAALLAEALDAGSIEIWTDVPGIYTTDPRLVTRARP IPEISFVEAAEMATFGAKVLHPATLQPAVRQDIPVFVGSSKDPAAGGTWIRASTSTNPLFRAVALRRQQVLVTLHSLNMF HAYGFLAEVFGILARHRISVDLITTSEVSVSLTLDHTGSQSNGEPVLSDKVLAELGQLCKVKVETGLALVALIGNRMSEA AGVGSQVFDAIREHNIRMICYGASAHNLCFLVKEEEAGHIVNRLHQELLD
Sequences:
>Translated_450_residues MSPMNVAKFGGTSVANAAAMNNCANVVLANPATRVVVLSASAGVTNLLVALAQGDLDEAGQEAQLAKLAEIQQAILTALG DPADVSTLIHATLGEIRTMARQASQHTDAELADRLIACGELMSTRLFTELLHQRGIKAHWQDVRQLMRTDSRFGKATVDL GATRGLCQQALGPLLGDSLIITQGFIGSDADGRTTTLGRGGSDYSAALLAEALDAGSIEIWTDVPGIYTTDPRLVTRARP IPEISFVEAAEMATFGAKVLHPATLQPAVRQDIPVFVGSSKDPAAGGTWIRASTSTNPLFRAVALRRQQVLVTLHSLNMF HAYGFLAEVFGILARHRISVDLITTSEVSVSLTLDHTGSQSNGEPVLSDKVLAELGQLCKVKVETGLALVALIGNRMSEA AGVGSQVFDAIREHNIRMICYGASAHNLCFLVKEEEAGHIVNRLHQELLD >Mature_449_residues SPMNVAKFGGTSVANAAAMNNCANVVLANPATRVVVLSASAGVTNLLVALAQGDLDEAGQEAQLAKLAEIQQAILTALGD PADVSTLIHATLGEIRTMARQASQHTDAELADRLIACGELMSTRLFTELLHQRGIKAHWQDVRQLMRTDSRFGKATVDLG ATRGLCQQALGPLLGDSLIITQGFIGSDADGRTTTLGRGGSDYSAALLAEALDAGSIEIWTDVPGIYTTDPRLVTRARPI PEISFVEAAEMATFGAKVLHPATLQPAVRQDIPVFVGSSKDPAAGGTWIRASTSTNPLFRAVALRRQQVLVTLHSLNMFH AYGFLAEVFGILARHRISVDLITTSEVSVSLTLDHTGSQSNGEPVLSDKVLAELGQLCKVKVETGLALVALIGNRMSEAA GVGSQVFDAIREHNIRMICYGASAHNLCFLVKEEEAGHIVNRLHQELLD
Specific function: Lysine biosynthesis; first step. [C]
COG id: COG0527
COG function: function code E; Aspartokinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ACT domain [H]
Homologues:
Organism=Escherichia coli, GI1790455, Length=450, Percent_Identity=61.1111111111111, Blast_Score=494, Evalue=1e-141, Organism=Escherichia coli, GI1786183, Length=468, Percent_Identity=32.9059829059829, Blast_Score=189, Evalue=5e-49, Organism=Escherichia coli, GI1790376, Length=397, Percent_Identity=29.4710327455919, Blast_Score=135, Evalue=5e-33, Organism=Saccharomyces cerevisiae, GI6320893, Length=500, Percent_Identity=27.6, Blast_Score=170, Evalue=5e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR001048 - InterPro: IPR005260 - InterPro: IPR001341 - InterPro: IPR018042 [H]
Pfam domain/function: PF00696 AA_kinase; PF01842 ACT [H]
EC number: =2.7.2.4 [H]
Molecular weight: Translated: 47825; Mature: 47694
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: PS00324 ASPARTOKINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPMNVAKFGGTSVANAAAMNNCANVVLANPATRVVVLSASAGVTNLLVALAQGDLDEAG CCCCCCHHCCCCHHHHHHHHHCCCCEEEECCCCEEEEEECCCCHHHHHHHHHCCCHHHCC QEAQLAKLAEIQQAILTALGDPADVSTLIHATLGEIRTMARQASQHTDAELADRLIACGE CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH LMSTRLFTELLHQRGIKAHWQDVRQLMRTDSRFGKATVDLGATRGLCQQALGPLLGDSLI HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCCEE ITQGFIGSDADGRTTTLGRGGSDYSAALLAEALDAGSIEIWTDVPGIYTTDPRLVTRARP EEECCCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCEECCCCHHHCCCC IPEISFVEAAEMATFGAKVLHPATLQPAVRQDIPVFVGSSKDPAAGGTWIRASTSTNPLF CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCEEECCCCCCCCCCCEEEECCCCCHHH RAVALRRQQVLVTLHSLNMFHAYGFLAEVFGILARHRISVDLITTSEVSVSLTLDHTGSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCEEEEEEEECCCCC SNGEPVLSDKVLAELGQLCKVKVETGLALVALIGNRMSEAAGVGSQVFDAIREHNIRMIC CCCCCCHHHHHHHHHHHHHEEHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEE YGASAHNLCFLVKEEEAGHIVNRLHQELLD ECCCCCCEEEEEEECCCCHHHHHHHHHHCC >Mature Secondary Structure SPMNVAKFGGTSVANAAAMNNCANVVLANPATRVVVLSASAGVTNLLVALAQGDLDEAG CCCCCHHCCCCHHHHHHHHHCCCCEEEECCCCEEEEEECCCCHHHHHHHHHCCCHHHCC QEAQLAKLAEIQQAILTALGDPADVSTLIHATLGEIRTMARQASQHTDAELADRLIACGE CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH LMSTRLFTELLHQRGIKAHWQDVRQLMRTDSRFGKATVDLGATRGLCQQALGPLLGDSLI HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCCEE ITQGFIGSDADGRTTTLGRGGSDYSAALLAEALDAGSIEIWTDVPGIYTTDPRLVTRARP EEECCCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCEECCCCHHHCCCC IPEISFVEAAEMATFGAKVLHPATLQPAVRQDIPVFVGSSKDPAAGGTWIRASTSTNPLF CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCEEECCCCCCCCCCCEEEECCCCCHHH RAVALRRQQVLVTLHSLNMFHAYGFLAEVFGILARHRISVDLITTSEVSVSLTLDHTGSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCEEEEEEEECCCCC SNGEPVLSDKVLAELGQLCKVKVETGLALVALIGNRMSEAAGVGSQVFDAIREHNIRMIC CCCCCCHHHHHHHHHHHHHEEHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEE YGASAHNLCFLVKEEEAGHIVNRLHQELLD ECCCCCCEEEEEEECCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3003049; 8265357; 9278503; 6312411 [H]