Definition Aeromonas salmonicida subsp. salmonicida A449, complete genome.
Accession NC_009348
Length 4,702,402

Click here to switch to the map view.

The map label for this gene is 145299477

Identifier: 145299477

GI number: 145299477

Start: 2713051

End: 2713512

Strand: Direct

Name: 145299477

Synonym: ASA_2541

Alternate gene names: NA

Gene position: 2713051-2713512 (Clockwise)

Preceding gene: 145299476

Following gene: 145299478

Centisome position: 57.7

GC content: 62.34

Gene sequence:

>462_bases
ATGAAACACAGCTTACTCAGCCTTGCCTTGGCAAGCCTGCTGGCCTCGGTCTGCGTGCACGCAACGGCCGACGAATCGGT
GGTGATCGATGGCCAGCAGTACAACACCATAGAGGTGAATGGCAAAACCTACCTGACGCCGGATAACGGCAGCAAGAAAC
GGGTCGCCCGCAGTCTGGATGGCAAGGTGCCACAACAGACCCTGCGCAGCGGCGACGTCCTGCTGCAAGGGGTCGCCAGC
CCTGAGCTGACCGTCAGCGGTACCCTGCTGGTCGAGGCCGATGACAATCAGGCCAAGGCTCTGGCGGGCCGCCACGGCCT
GCAGTTCAAGCAGAGCAGCGGCGGCATCGCCCTGCTGGAGGCCAAGCCAGGCTCGGATCTGAACGCTATTGCCACCCAGC
TCAAGCAGCAAGGGGTCAGGGTGCAGATCGAACTGGCCGGAGCACTGAAACAGCCAAAGTGA

Upstream 100 bases:

>100_bases
GACCGAGCGCAACAACAGCCAGCCGGGTCAACTGCTCGACTGGTCCCTGCGGGTACTCGGTCACGACGCAGCCCGTTCCT
GATCACAGAGGAGTCATAAC

Downstream 100 bases:

>100_bases
GCAAGCCCTTGCGCTGACAAGCGCGAGGTATCTTGCACACGCCGAGGGGGCCGCTGGCCCCCTCTCTTCTGCCCGAGCGT
CTGCGCCCTGCACCTCGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MKHSLLSLALASLLASVCVHATADESVVIDGQQYNTIEVNGKTYLTPDNGSKKRVARSLDGKVPQQTLRSGDVLLQGVAS
PELTVSGTLLVEADDNQAKALAGRHGLQFKQSSGGIALLEAKPGSDLNAIATQLKQQGVRVQIELAGALKQPK

Sequences:

>Translated_153_residues
MKHSLLSLALASLLASVCVHATADESVVIDGQQYNTIEVNGKTYLTPDNGSKKRVARSLDGKVPQQTLRSGDVLLQGVAS
PELTVSGTLLVEADDNQAKALAGRHGLQFKQSSGGIALLEAKPGSDLNAIATQLKQQGVRVQIELAGALKQPK
>Mature_153_residues
MKHSLLSLALASLLASVCVHATADESVVIDGQQYNTIEVNGKTYLTPDNGSKKRVARSLDGKVPQQTLRSGDVLLQGVAS
PELTVSGTLLVEADDNQAKALAGRHGLQFKQSSGGIALLEAKPGSDLNAIATQLKQQGVRVQIELAGALKQPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16038; Mature: 16038

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHSLLSLALASLLASVCVHATADESVVIDGQQYNTIEVNGKTYLTPDNGSKKRVARSLD
CCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEECCEEEECCCCCCHHHHHHHHC
GKVPQQTLRSGDVLLQGVASPELTVSGTLLVEADDNQAKALAGRHGLQFKQSSGGIALLE
CCCCHHHHCCCCEEEEECCCCCEEEEEEEEEEECCCCHHHHHCCCCCEEEECCCCEEEEE
AKPGSDLNAIATQLKQQGVRVQIELAGALKQPK
CCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCC
>Mature Secondary Structure
MKHSLLSLALASLLASVCVHATADESVVIDGQQYNTIEVNGKTYLTPDNGSKKRVARSLD
CCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEECCEEEECCCCCCHHHHHHHHC
GKVPQQTLRSGDVLLQGVASPELTVSGTLLVEADDNQAKALAGRHGLQFKQSSGGIALLE
CCCCHHHHCCCCEEEEECCCCCEEEEEEEEEEECCCCHHHHHCCCCCEEEECCCCEEEEE
AKPGSDLNAIATQLKQQGVRVQIELAGALKQPK
CCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA