| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is 145299421
Identifier: 145299421
GI number: 145299421
Start: 2644419
End: 2645321
Strand: Direct
Name: 145299421
Synonym: ASA_2482
Alternate gene names: NA
Gene position: 2644419-2645321 (Clockwise)
Preceding gene: 145299420
Following gene: 145299424
Centisome position: 56.24
GC content: 55.04
Gene sequence:
>1163_bases ATGACAAGATTACGTTGCTCATTTACTGCCGAATTCAAACTCGAAGCCGCATCCTTGGTGCTCGACCAGGGGTATTCTGT TCCCGAAGCAAGCCGTTCGCTGGATGTCGGTGAAACCGTACTTCGCCGCTGGGTTCAGCAGCTTCAATCCGAACGCTGTG GCACTACCCCAATCAGCAAAGCGCTGACTCCGGAGCAGCAGAAAATCCAGGTGCTGGAAGCCCGTATCAACCGGCTCGAG CGCGAAAAGGACATACTAAAAAAGGCTACTGCTCTCTTGATGGCGGACGAGTTCACACGTACGCGCTGATAGACCGATTA AGGGAGCAAGCCCCCATCACCCTGGTCTGCTGCGCTTTCGATATTCCCACATCCTGTTTTTACGATTATCTGGCTCGCAG GAGAGTGATTAACCGTGAGCGGATGAAACAACGAAGCGAGTTGCGCCGTTTGTTCAAAGAGAGCCGGGATTCCGCAGGCA GCCGCGCCTTGATGTCGATGATGCGAGAGCTGGGGTATCAGATTGGCCGATTCAAAGTCCGTAACCTGATGAAGGAAGCT GGGCTGGCGTCCAAACAGCCGGGCGCACACCGTTATAAGGTTGCATGCTCTGAACGACCGGATATTCCGAATCTGCTGGC CCGCGAATTTGATGTTCCGCAACCCAATCAGGTGTGGTGTGGCGATATCACCTACGTCTGGACAAGTGCTCGTTGGCATT ACTTAGCAGTGGTGCTTGACCTTCATACCCGGCGAGTCGTGGGCTGGGCGATGTCTGACAAGCCTGATGCAGAGCTGGCA ATCAAAGCACTGGAGATGGCCTATCAGCAGCGGGGTTGCCCATCCGGTGTGCTGTTTCACTCCGACCAGGGTAGCCAATA TGGCAGCAGGGCATTTCGGCAACGACTGTGGCGCTATCGCATGACCCAGAGCATGAGTCGGCGTGGCAACTGCTGGGATA ACGCCCCGATGGAGCGATTGTTCAGAAGCCTGAAGTCAGAGTGGCTCCCGGCAACGGGATACATGAGCCTGCGGGAAGCA ACGCGAGATATCAGTTATTACCTGATGGATTACTACAACTGGCGGCGTCCACATCAACACAATGACGGGATACCGCCAGC AAAAGCCGAGGATCGGCCTAACCAAGTGTCTGGATTTAGTTGA
Upstream 100 bases:
>100_bases CGGCCATTGCTCATCGCGTTCACAGATAAGCGTGTAGTGGTCTAATCATCCCGGACACCATTTTAGGTGGTACAGTCGCC ACCATGACCTGAGGTGTTCA
Downstream 100 bases:
>100_bases CCACTATAATACGCAGTGTGTCCTGATGAGCCTCATCAGGCGTTGTTGAAGAAAAGCATGCCTGTGCATTATTAAGATCA GCCGATTTCGCTAATCTCCA
Product: IS3 family transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>387_residues MTRLRCSFTAEFKLEAASLVLDQGYSVPEASRSLDVGETVLRRWVQQLQSERCGTTPISKALTPEQQKIQVLEARINRLE REKDILKKGYCSLDGGRVHTYALIDRLREQAPITLVCCAFDIPTSCFYDYLARRRVINRERMKQRSELRRLFKESRDSAG SRALMSMMRELGYQIGRFKVRNLMKEAGLASKQPGAHRYKVACSERPDIPNLLAREFDVPQPNQVWCGDITYVWTSARWH YLAVVLDLHTRRVVGWAMSDKPDAELAIKALEMAYQQRGCPSGVLFHSDQGSQYGSRAFRQRLWRYRMTQSMSRRGNCWD NAPMERLFRSLKSEWLPATGYMSLREATRDISYYLMDYYNWRRPHQHNDGIPPAKAEDRPNQVSGFS
Sequences:
>Translated_301_residues STKSRHLVRPILGFCWRYPVIVLMWTPPVVVIHQVITDISRCFPQAHVSRCREPL*LQASEQSLHRGVIPAVATPTHALG HAIAPQSLPKCPAAILATLVGVKQHTGWATPLLIGHLQCFDCQLCIRLVRHRPAHDSPGMKVKHHC*VMPTSTCPDVGDI ATPHLIGLRNIKFAGQQIRNIRSFRACNLITVCARLFGRQPSFLHQVTDFESANLIPQLSHHRHQGAAACGIPALFEQTA QLASLFHPLTVNHSPASQIIVKTGCGNIESAADQGDGGLLP*SVYQRVRVNSSAIKRAVAF >Mature_301_residues STKSRHLVRPILGFCWRYPVIVLMWTPPVVVIHQVITDISRCFPQAHVSRCREPL*LQASEQSLHRGVIPAVATPTHALG HAIAPQSLPKCPAAILATLVGVKQHTGWATPLLIGHLQCFDCQLCIRLVRHRPAHDSPGMKVKHHC*VMPTSTCPDVGDI ATPHLIGLRNIKFAGQQIRNIRSFRACNLITVCARLFGRQPSFLHQVTDFESANLIPQLSHHRHQGAAACGIPALFEQTA QLASLFHPLTVNHSPASQIIVKTGCGNIESAADQGDGGLLP*SVYQRVRVNSSAIKRAVAF
Specific function: Unknown
COG id: COG2801
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32475; Mature: 32475
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure STKSRHLVRPILGFCWRYPVIVLMWTPPVVVIHQVITDISRCFPQAHVSRCREPLLQASE CCCCHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH QSLHRGVIPAVATPTHALGHAIAPQSLPKCPAAILATLVGVKQHTGWATPLLIGHLQCFD HHHHHCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH CQLCIRLVRHRPAHDSPGMKVKHHCVMPTSTCPDVGDIATPHLIGLRNIKFAGQQIRNIR HHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH SFRACNLITVCARLFGRQPSFLHQVTDFESANLIPQLSHHRHQGAAACGIPALFEQTAQL HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCHHCCCHHHHHHHHHH ASLFHPLTVNHSPASQIIVKTGCGNIESAADQGDGGLLPSVYQRVRVNSSAIKRAVAF HHHHCCCCCCCCCHHHEEEECCCCCHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA