| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is trxB [H]
Identifier: 145299390
GI number: 145299390
Start: 2604522
End: 2605472
Strand: Direct
Name: trxB [H]
Synonym: ASA_2440
Alternate gene names: 145299390
Gene position: 2604522-2605472 (Clockwise)
Preceding gene: 145299382
Following gene: 145299391
Centisome position: 55.39
GC content: 60.57
Gene sequence:
>951_bases ATGAGCCAAGTCACTCACAGCAAACTGCTGATCCTGGGGTCAGGCCCGGCCGGTTACACCGCCGCCGTCTACGCAGCCCG CGCCAACCTGAATCCTCTGCTCATCACAGGTATGCAGCAAGGTGGTCAGCTGACCACCACCACAGAGGTGGAAAACTGGC CCGGTGATTCCGAAGGTCTGACCGGTCCAGCCCTGATGGAGCGCATGAAGGCCCATGCGGAGAAGTTCGATACCCGCATC CTGTTTGATCACATCAATGAAGTGGAGCTGACCCAGCGTCCGTTCCGCCTCAAGGGCGACAGCGCCGAATACACCTGCGA TGCGCTGATCATCGCCACCGGCGCCTCCGCCAAATATTTGGGACTGCCTTCCGAAGAGGCCTTCAAGGGACGCGGCGTCT CCGCCTGCGCTACCTGTGACGGCTTCTTCTATCGCAACCAGGAAGTGGCGGTGATCGGCGGCGGCAATACCGCAGTGGAA GAAGCACTCTATCTTGCCAACATCGCCAAGAAGGTGCACCTCATTCACCGCCGCGATGAGTTTCGCGCCGAGAAGATCCT GATCAAGCTTCTGCACGACAAGGTAGCGAGCGGCAACATAGTGCTGCACACCCACCAGACCCTGGACGAAGTGCTGGGGG ATCAGATGGGCGTGACCGGTGTGCGCCTGCGCAGCACGCAGGATGACACCACCACGGATCTGCCGCTGATGGGCGTATTC ATTGCTATCGGCCACCAGCCGAATACCCAGATCTTCGAGGGCCAGCTGGCGATGCAAAACGGCTACCTGATCGTGCGTGG CGGACTGGACGGCTTTGCCACCCAGACCAGTATTGAAGGGGTATTTGCCGCCGGCGACGTGGCCGATCACAACTACCGTC AGGCCATCACGTCTGCCGGCACCGGCTGCATGGCCGCTCTCGATGCCGAGCGATATCTGGACGCGCAATAA
Upstream 100 bases:
>100_bases GCACCTATGGTCGATTGGCACAATCGACTCACTGACCTTTGACCCCATATCACGAATTACCTACAATCGCGCAAACTCAT CACGTCTCGGAAATCACATC
Downstream 100 bases:
>100_bases GCGCAAGGGATATAAAAGGCATGCCGTGAGGCATGCCTTTTTACGTTAAGGAGCCGGATGAAACAGAAAATATTGATTGT CGAAGATAGCATGACGATCC
Product: thioredoxin reductase
Products: NA
Alternate protein names: TRXR [H]
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MSQVTHSKLLILGSGPAGYTAAVYAARANLNPLLITGMQQGGQLTTTTEVENWPGDSEGLTGPALMERMKAHAEKFDTRI LFDHINEVELTQRPFRLKGDSAEYTCDALIIATGASAKYLGLPSEEAFKGRGVSACATCDGFFYRNQEVAVIGGGNTAVE EALYLANIAKKVHLIHRRDEFRAEKILIKLLHDKVASGNIVLHTHQTLDEVLGDQMGVTGVRLRSTQDDTTTDLPLMGVF IAIGHQPNTQIFEGQLAMQNGYLIVRGGLDGFATQTSIEGVFAAGDVADHNYRQAITSAGTGCMAALDAERYLDAQ
Sequences:
>Translated_316_residues MSQVTHSKLLILGSGPAGYTAAVYAARANLNPLLITGMQQGGQLTTTTEVENWPGDSEGLTGPALMERMKAHAEKFDTRI LFDHINEVELTQRPFRLKGDSAEYTCDALIIATGASAKYLGLPSEEAFKGRGVSACATCDGFFYRNQEVAVIGGGNTAVE EALYLANIAKKVHLIHRRDEFRAEKILIKLLHDKVASGNIVLHTHQTLDEVLGDQMGVTGVRLRSTQDDTTTDLPLMGVF IAIGHQPNTQIFEGQLAMQNGYLIVRGGLDGFATQTSIEGVFAAGDVADHNYRQAITSAGTGCMAALDAERYLDAQ >Mature_315_residues SQVTHSKLLILGSGPAGYTAAVYAARANLNPLLITGMQQGGQLTTTTEVENWPGDSEGLTGPALMERMKAHAEKFDTRIL FDHINEVELTQRPFRLKGDSAEYTCDALIIATGASAKYLGLPSEEAFKGRGVSACATCDGFFYRNQEVAVIGGGNTAVEE ALYLANIAKKVHLIHRRDEFRAEKILIKLLHDKVASGNIVLHTHQTLDEVLGDQMGVTGVRLRSTQDDTTTDLPLMGVFI AIGHQPNTQIFEGQLAMQNGYLIVRGGLDGFATQTSIEGVFAAGDVADHNYRQAITSAGTGCMAALDAERYLDAQ
Specific function: Unknown
COG id: COG0492
COG function: function code O; Thioredoxin reductase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1787114, Length=315, Percent_Identity=78.7301587301587, Blast_Score=513, Evalue=1e-147, Organism=Escherichia coli, GI87081763, Length=314, Percent_Identity=33.1210191082803, Blast_Score=133, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6321898, Length=328, Percent_Identity=45.7317073170732, Blast_Score=281, Evalue=1e-76, Organism=Saccharomyces cerevisiae, GI6320560, Length=324, Percent_Identity=46.2962962962963, Blast_Score=276, Evalue=3e-75,
Paralogues:
None
Copy number: 808 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR008255 - InterPro: IPR001327 - InterPro: IPR000103 - InterPro: IPR005982 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: =1.8.1.9 [H]
Molecular weight: Translated: 34043; Mature: 33912
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: PS00573 PYRIDINE_REDOX_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQVTHSKLLILGSGPAGYTAAVYAARANLNPLLITGMQQGGQLTTTTEVENWPGDSEGL CCCCCCEEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCC TGPALMERMKAHAEKFDTRILFDHINEVELTQRPFRLKGDSAEYTCDALIIATGASAKYL CCHHHHHHHHHHHHHHCCEEEECCCCCEEECCCCEEECCCCCCEEEEEEEEEECCCEEEE GLPSEEAFKGRGVSACATCDGFFYRNQEVAVIGGGNTAVEEALYLANIAKKVHLIHRRDE CCCCHHHHCCCCCEEEEECCCEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH FRAEKILIKLLHDKVASGNIVLHTHQTLDEVLGDQMGVTGVRLRSTQDDTTTDLPLMGVF HHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHEEEE IAIGHQPNTQIFEGQLAMQNGYLIVRGGLDGFATQTSIEGVFAAGDVADHNYRQAITSAG EEECCCCCCEEEECEEEEECCEEEEEECCCCCCCHHCCCEEEEECCCCCCHHHHHHHHCC TGCMAALDAERYLDAQ CCCEEEECHHHHCCCC >Mature Secondary Structure SQVTHSKLLILGSGPAGYTAAVYAARANLNPLLITGMQQGGQLTTTTEVENWPGDSEGL CCCCCEEEEEEECCCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCC TGPALMERMKAHAEKFDTRILFDHINEVELTQRPFRLKGDSAEYTCDALIIATGASAKYL CCHHHHHHHHHHHHHHCCEEEECCCCCEEECCCCEEECCCCCCEEEEEEEEEECCCEEEE GLPSEEAFKGRGVSACATCDGFFYRNQEVAVIGGGNTAVEEALYLANIAKKVHLIHRRDE CCCCHHHHCCCCCEEEEECCCEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH FRAEKILIKLLHDKVASGNIVLHTHQTLDEVLGDQMGVTGVRLRSTQDDTTTDLPLMGVF HHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHEEEE IAIGHQPNTQIFEGQLAMQNGYLIVRGGLDGFATQTSIEGVFAAGDVADHNYRQAITSAG EEECCCCCCEEEECEEEEECCEEEEEECCCCCCCHHCCCEEEEECCCCCCHHHHHHHHCC TGCMAALDAERYLDAQ CCCEEEECHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]