Click here to switch to the map view.

The map label for this gene is dacC [H]

Identifier: 145299285

GI number: 145299285

Start: 2470343

End: 2471098

Strand: Direct

Name: dacC [H]

Synonym: ASA_2329

Alternate gene names: 145299285

Gene position: 2470343-2471098 (Clockwise)

Preceding gene: 145299284

Following gene: 145299287

Centisome position: 52.53

GC content: 62.7

Gene sequence:

>756_bases
GTGGTCGCCAACCCGCGCACCGGCGAGGTGCTCTCCGAGCGCAACGCCAACCGTGTGATGCCGATTGCCTCCATCACTAA
ATTGATGACGGCTCTGGTGGTGCTCGATGCCAATCAGCGTCTCTCCGAGACGCTCACCGTTACCATGGCCGACGTGGATC
GCCTCAAGGGCACGGGTTCACGGTTGGCGGTAGGTTCACGCCTCAGCCGCGCCGACATGCTGCACATCGCCTTGATGTCG
TCGGAAAACCGCGCCGCCTCGGCCCTGGCAAGACACTACCCGGGGGGGCAACGCGCCTTTATCGAAGCGATGAATGCCAA
GGCCAGCATGCTTGGCATGTGGAGCACCCAGTTTGCAGACAGCACTGGCCTCAATCCGCGCAATGTCTCCAGCGCCCATG
ATCTGGCCAAGCTGGTGGCGGCCGCTTCGGCCTACCCGCTGATCCGGCAATACTCCGCCACAGAGCAGCGCATGGTACGC
AATGGCAAGCGCCAGCTGCACTATCTCAACTCCAACCGACTGGTGCGCGAAGGCAGCTGGCTGGTCACCCTCTCCAAGAC
GGGCTACATCCGCGAGGCGGGTCGCTGTCTGGTGATGGCAACCCAGATCAACCGCGAACCGGTGATCCTGGTGCTGCTCA
ATGCCGATACTCCCAATGCCAGGGTGGCGGATGCCAAGCGTATCAAGGTCCTGGCTGGAGAGCTCGGGGCGCACCAGCCT
GACGGCTCAATCCAGCCCCCAGACCAAGTTGTTTAG

Upstream 100 bases:

>100_bases
CATGGAGAGCGTCCAGGCCAACCCGTTTTCAGCAGCATCTCCCTCCCCCAATCGCTTTCTCGAACAACGCAGCGATCTGG
CCCTGAGTTCGGCCTCCTTC

Downstream 100 bases:

>100_bases
CAGCCAGTAATCCGCGTCCATCCCCCAATGTAAAAAGCCCCCGCACCACTGGTGCGGGGGCTTTGCTGTTGGCGTGGCCA
ATGGTGCCGGTCAAGAAACC

Product: D-alanyl-D-alanine carboxypeptidase

Products: NA

Alternate protein names: DD-endopeptidase; Penicillin-binding protein 5; PBP-5 [H]

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MVANPRTGEVLSERNANRVMPIASITKLMTALVVLDANQRLSETLTVTMADVDRLKGTGSRLAVGSRLSRADMLHIALMS
SENRAASALARHYPGGQRAFIEAMNAKASMLGMWSTQFADSTGLNPRNVSSAHDLAKLVAAASAYPLIRQYSATEQRMVR
NGKRQLHYLNSNRLVREGSWLVTLSKTGYIREAGRCLVMATQINREPVILVLLNADTPNARVADAKRIKVLAGELGAHQP
DGSIQPPDQVV

Sequences:

>Translated_251_residues
MVANPRTGEVLSERNANRVMPIASITKLMTALVVLDANQRLSETLTVTMADVDRLKGTGSRLAVGSRLSRADMLHIALMS
SENRAASALARHYPGGQRAFIEAMNAKASMLGMWSTQFADSTGLNPRNVSSAHDLAKLVAAASAYPLIRQYSATEQRMVR
NGKRQLHYLNSNRLVREGSWLVTLSKTGYIREAGRCLVMATQINREPVILVLLNADTPNARVADAKRIKVLAGELGAHQP
DGSIQPPDQVV
>Mature_251_residues
MVANPRTGEVLSERNANRVMPIASITKLMTALVVLDANQRLSETLTVTMADVDRLKGTGSRLAVGSRLSRADMLHIALMS
SENRAASALARHYPGGQRAFIEAMNAKASMLGMWSTQFADSTGLNPRNVSSAHDLAKLVAAASAYPLIRQYSATEQRMVR
NGKRQLHYLNSNRLVREGSWLVTLSKTGYIREAGRCLVMATQINREPVILVLLNADTPNARVADAKRIKVLAGELGAHQP
DGSIQPPDQVV

Specific function: Cell wall formation [H]

COG id: COG1686

COG function: function code M; D-alanyl-D-alanine carboxypeptidase

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S11 family [H]

Homologues:

Organism=Escherichia coli, GI87082054, Length=231, Percent_Identity=48.9177489177489, Blast_Score=210, Evalue=7e-56,
Organism=Escherichia coli, GI87082022, Length=232, Percent_Identity=31.0344827586207, Blast_Score=77, Evalue=8e-16,
Organism=Escherichia coli, GI1787062, Length=233, Percent_Identity=32.1888412017167, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1786851, Length=233, Percent_Identity=30.9012875536481, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR018044
- InterPro:   IPR001967 [H]

Pfam domain/function: PF00768 Peptidase_S11 [H]

EC number: 3.4.99.- [C]

Molecular weight: Translated: 27284; Mature: 27284

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVANPRTGEVLSERNANRVMPIASITKLMTALVVLDANQRLSETLTVTMADVDRLKGTGS
CCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHEEEEEEHHHHHHCCCCC
RLAVGSRLSRADMLHIALMSSENRAASALARHYPGGQRAFIEAMNAKASMLGMWSTQFAD
EEECCCCCCHHHEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHCCCHHHHCCHHHHCCC
STGLNPRNVSSAHDLAKLVAAASAYPLIRQYSATEQRMVRNGKRQLHYLNSNRLVREGSW
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCEEECCCE
LVTLSKTGYIREAGRCLVMATQINREPVILVLLNADTPNARVADAKRIKVLAGELGAHQP
EEEECCCCCHHHCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCHHHHHEEEHHHCCCCC
DGSIQPPDQVV
CCCCCCCCCCC
>Mature Secondary Structure
MVANPRTGEVLSERNANRVMPIASITKLMTALVVLDANQRLSETLTVTMADVDRLKGTGS
CCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHEEEEEEHHHHHHCCCCC
RLAVGSRLSRADMLHIALMSSENRAASALARHYPGGQRAFIEAMNAKASMLGMWSTQFAD
EEECCCCCCHHHEEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHCCCHHHHCCHHHHCCC
STGLNPRNVSSAHDLAKLVAAASAYPLIRQYSATEQRMVRNGKRQLHYLNSNRLVREGSW
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCEEECCCE
LVTLSKTGYIREAGRCLVMATQINREPVILVLLNADTPNARVADAKRIKVLAGELGAHQP
EEEECCCCCHHHCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCHHHHHEEEHHHCCCCC
DGSIQPPDQVV
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]