| Definition | Aeromonas salmonicida subsp. salmonicida A449, complete genome. |
|---|---|
| Accession | NC_009348 |
| Length | 4,702,402 |
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The map label for this gene is yceL [C]
Identifier: 145299180
GI number: 145299180
Start: 2344793
End: 2346022
Strand: Direct
Name: yceL [C]
Synonym: ASA_2211
Alternate gene names: 145299180
Gene position: 2344793-2346022 (Clockwise)
Preceding gene: 145299179
Following gene: 145299183
Centisome position: 49.86
GC content: 65.93
Gene sequence:
>1230_bases ATGAGCCGCGCCTCCTACTGGCGGGGCTGGCAGGGCATGAGCCCGGCCGCCCGCCTGCTCATCATCAATGGACTGGCGTT CAATCTCGGCTTCTACATGATGATGCCCTTCCTCGCCCAGCACATGGGCAGCGGGCTTGGCCTCGCTGGCTGGGCCTGTG GTCTGGTCATGGGGATGCGGGTATTCAGCCAGCAGGGTCTGTTTCTGCTGGGAGGCACTCTGGGGGATCGCATCGGCTAT CACACTGCCATCGTCTGGGGTTGCCTGGTGCGATCATTAGGCTTCGTGCTGCTGGGCTGGGCCGAGTCCCTGCCCATACT GCTGCTGGCGGCCGCCCTCACCGGCTTTGCCGGGGCCCTCTTCACCCCTTGCGCCCAGGCCTATCTGGCCAGCGAATGCA GCACCCCGAGCCAGCGCCAGCGCGCCTTCGCCCTGCACAATCTCGCCAGCCAGGCGGGCATGCTGCTCGGCCCCCTGGTC GGCCTGACCTTGACCCAGCAGAGCTATGCCCTGACCGGGCTCTTGGCGGCGAGCCTGTTCGCCCTGCTGGGGGTGTTGCA GTATCGGGTGCTGCCCAAGCGCCCGGTGGCCAACCAGACCCCGCACGGCGCCATTCTGAGCCAATGGCGGGACATCCTGC GCCAGCGCCCCTTTATGCGGTTCACTCTGCTGGCGGGCAGCTATCAGATCCTGTTCCATCAGCTCTATCTCGCCCTGCCC GCCCATATCCAGAGCCTGCCGGACGCCACCTATCTGCTCGGCGGCGTCTTCACCCTCTCGGCGGTGATCGGCATCCTGCT CCAGCTGCCGGCATCTCGCTTGGTGGAGCGCCACCTGGGGGTGCCCCTGGCCATGGGGCTGGGTATCGGACTGATGGGGC TGAGCTATCTGGCCCTGCCGCTGCTCTCCCCCTGGCCGACGGTGGGGGTATTGGCGCAGGTGGCCCTGCTTTCCTTGGGC TCCATTCTCTGCTTCCCGCTCTTTGCCGCCCAGTTGCCCCGCTACGCGCTCCCTGACCAGCTCGCCAGCTACTACGGCTT CTATGCAAGTGCGGGTGGCTGCATGGCGCTCTTTGGCAACCTGCTGATCGGTTTTATGCTGGGGGATGCGGGGACCCGTC CCGCCACCGCTATCTGGTTCCTGCTGGCATTGACGGGGGGACTGGCAGGATTCGGACTCTATTCTCAGTTGCGATCCGGC AAGCATGGCAGCTCGCCTCTGCCCGAATGA
Upstream 100 bases:
>100_bases TTTCTTCGTACCCTGCGCAGATCATGATGACGAGACTTCCCATGACAGCGCCTGCGGCGCGCTTGCAACTGCACGTAACC GGCGCCCGGGTGCACACAAG
Downstream 100 bases:
>100_bases CAGAGGTGGTAGATCCTGCGGGCCATGTTAACGACAGGTGTTCAACTGTTCAGATGCAGCGCCAGCCAGACTGCCAGAGG GATCACCACTACAGAGAGTG
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 409; Mature: 408
Protein sequence:
>409_residues MSRASYWRGWQGMSPAARLLIINGLAFNLGFYMMMPFLAQHMGSGLGLAGWACGLVMGMRVFSQQGLFLLGGTLGDRIGY HTAIVWGCLVRSLGFVLLGWAESLPILLLAAALTGFAGALFTPCAQAYLASECSTPSQRQRAFALHNLASQAGMLLGPLV GLTLTQQSYALTGLLAASLFALLGVLQYRVLPKRPVANQTPHGAILSQWRDILRQRPFMRFTLLAGSYQILFHQLYLALP AHIQSLPDATYLLGGVFTLSAVIGILLQLPASRLVERHLGVPLAMGLGIGLMGLSYLALPLLSPWPTVGVLAQVALLSLG SILCFPLFAAQLPRYALPDQLASYYGFYASAGGCMALFGNLLIGFMLGDAGTRPATAIWFLLALTGGLAGFGLYSQLRSG KHGSSPLPE
Sequences:
>Translated_409_residues MSRASYWRGWQGMSPAARLLIINGLAFNLGFYMMMPFLAQHMGSGLGLAGWACGLVMGMRVFSQQGLFLLGGTLGDRIGY HTAIVWGCLVRSLGFVLLGWAESLPILLLAAALTGFAGALFTPCAQAYLASECSTPSQRQRAFALHNLASQAGMLLGPLV GLTLTQQSYALTGLLAASLFALLGVLQYRVLPKRPVANQTPHGAILSQWRDILRQRPFMRFTLLAGSYQILFHQLYLALP AHIQSLPDATYLLGGVFTLSAVIGILLQLPASRLVERHLGVPLAMGLGIGLMGLSYLALPLLSPWPTVGVLAQVALLSLG SILCFPLFAAQLPRYALPDQLASYYGFYASAGGCMALFGNLLIGFMLGDAGTRPATAIWFLLALTGGLAGFGLYSQLRSG KHGSSPLPE >Mature_408_residues SRASYWRGWQGMSPAARLLIINGLAFNLGFYMMMPFLAQHMGSGLGLAGWACGLVMGMRVFSQQGLFLLGGTLGDRIGYH TAIVWGCLVRSLGFVLLGWAESLPILLLAAALTGFAGALFTPCAQAYLASECSTPSQRQRAFALHNLASQAGMLLGPLVG LTLTQQSYALTGLLAASLFALLGVLQYRVLPKRPVANQTPHGAILSQWRDILRQRPFMRFTLLAGSYQILFHQLYLALPA HIQSLPDATYLLGGVFTLSAVIGILLQLPASRLVERHLGVPLAMGLGIGLMGLSYLALPLLSPWPTVGVLAQVALLSLGS ILCFPLFAAQLPRYALPDQLASYYGFYASAGGCMALFGNLLIGFMLGDAGTRPATAIWFLLALTGGLAGFGLYSQLRSGK HGSSPLPE
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI87081828, Length=350, Percent_Identity=28.8571428571429, Blast_Score=118, Evalue=6e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 43605; Mature: 43474
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRASYWRGWQGMSPAARLLIINGLAFNLGFYMMMPFLAQHMGSGLGLAGWACGLVMGMR CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH VFSQQGLFLLGGTLGDRIGYHTAIVWGCLVRSLGFVLLGWAESLPILLLAAALTGFAGAL HHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTPCAQAYLASECSTPSQRQRAFALHNLASQAGMLLGPLVGLTLTQQSYALTGLLAASLF HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH ALLGVLQYRVLPKRPVANQTPHGAILSQWRDILRQRPFMRFTLLAGSYQILFHQLYLALP HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHH AHIQSLPDATYLLGGVFTLSAVIGILLQLPASRLVERHLGVPLAMGLGIGLMGLSYLALP HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LLSPWPTVGVLAQVALLSLGSILCFPLFAAQLPRYALPDQLASYYGFYASAGGCMALFGN HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHH LLIGFMLGDAGTRPATAIWFLLALTGGLAGFGLYSQLRSGKHGSSPLPE HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SRASYWRGWQGMSPAARLLIINGLAFNLGFYMMMPFLAQHMGSGLGLAGWACGLVMGMR CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH VFSQQGLFLLGGTLGDRIGYHTAIVWGCLVRSLGFVLLGWAESLPILLLAAALTGFAGAL HHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTPCAQAYLASECSTPSQRQRAFALHNLASQAGMLLGPLVGLTLTQQSYALTGLLAASLF HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH ALLGVLQYRVLPKRPVANQTPHGAILSQWRDILRQRPFMRFTLLAGSYQILFHQLYLALP HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHH AHIQSLPDATYLLGGVFTLSAVIGILLQLPASRLVERHLGVPLAMGLGIGLMGLSYLALP HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LLSPWPTVGVLAQVALLSLGSILCFPLFAAQLPRYALPDQLASYYGFYASAGGCMALFGN HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHH LLIGFMLGDAGTRPATAIWFLLALTGGLAGFGLYSQLRSGKHGSSPLPE HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]