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The map label for this gene is yciU [C]

Identifier: 145299142

GI number: 145299142

Start: 2306318

End: 2306644

Strand: Direct

Name: yciU [C]

Synonym: ASA_2170

Alternate gene names: 145299142

Gene position: 2306318-2306644 (Clockwise)

Preceding gene: 145299141

Following gene: 145299143

Centisome position: 49.05

GC content: 55.96

Gene sequence:

>327_bases
ATGTCTTTGAACGATGAAATGCACAGCGTCGAGGAACTGCTCGACACCGCACTCGAACTTTTCATGGAGCTGGCCTCCGA
CAACTTGCCGGAGCAGGAGATTGCCGTCTTCAACCGGGAGTTCAACAGTCGCGGCCTGCTGGCGGAAACCGATCCGGCCG
ATGACTGGGAAGCGGACGTGGGATTTGCCGTAAGCGATACCGAGTATGCCGAGATCTGGATCGGGCTTGGTAATGCCGAA
CAAGAATATGAGCACCTGTTTGCCCGCATGCTGCTCTCCCGCCGTGTTGACGAGAAGTTCTGCCACATCGAATGGTTGCC
CCAATAA

Upstream 100 bases:

>100_bases
TGATCTCGCCAAGGAAGAGGGGGCCAGCTAGAATACCGCGCGCCACTGTTCGGCTTCGCCGACGGGGCGTCTCATTTTTA
TTATCTGGAACGGACGATCT

Downstream 100 bases:

>100_bases
TTCCGGATCCCGATGATCTGCGTCCCCGCTATTATGCCCCCGAGCCGGCACGTCCGGCTCTGGGACGGCGCATGCTGAGC
TGGCTCGGCAAGCTGCTGGC

Product: dsDNA-mimic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MSLNDEMHSVEELLDTALELFMELASDNLPEQEIAVFNREFNSRGLLAETDPADDWEADVGFAVSDTEYAEIWIGLGNAE
QEYEHLFARMLLSRRVDEKFCHIEWLPQ

Sequences:

>Translated_108_residues
MSLNDEMHSVEELLDTALELFMELASDNLPEQEIAVFNREFNSRGLLAETDPADDWEADVGFAVSDTEYAEIWIGLGNAE
QEYEHLFARMLLSRRVDEKFCHIEWLPQ
>Mature_107_residues
SLNDEMHSVEELLDTALELFMELASDNLPEQEIAVFNREFNSRGLLAETDPADDWEADVGFAVSDTEYAEIWIGLGNAEQ
EYEHLFARMLLSRRVDEKFCHIEWLPQ

Specific function: Unknown

COG id: COG3099

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0263 family [H]

Homologues:

Organism=Escherichia coli, GI87081860, Length=106, Percent_Identity=41.5094339622642, Blast_Score=80, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007376
- ProDom:   PD020447 [H]

Pfam domain/function: PF04269 DUF440 [H]

EC number: NA

Molecular weight: Translated: 12509; Mature: 12378

Theoretical pI: Translated: 3.78; Mature: 3.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLNDEMHSVEELLDTALELFMELASDNLPEQEIAVFNREFNSRGLLAETDPADDWEADV
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEECCCCCCCCCCCC
GFAVSDTEYAEIWIGLGNAEQEYEHLFARMLLSRRVDEKFCHIEWLPQ
CEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCC
>Mature Secondary Structure 
SLNDEMHSVEELLDTALELFMELASDNLPEQEIAVFNREFNSRGLLAETDPADDWEADV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEECCCCCCCCCCCC
GFAVSDTEYAEIWIGLGNAEQEYEHLFARMLLSRRVDEKFCHIEWLPQ
CEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA