Click here to switch to the map view.

The map label for this gene is ygaZ [C]

Identifier: 145297076

GI number: 145297076

Start: 3294087

End: 3294800

Strand: Reverse

Name: ygaZ [C]

Synonym: cgR_2972

Alternate gene names: 145297076

Gene position: 3294800-3294087 (Counterclockwise)

Preceding gene: 145297077

Following gene: 145297075

Centisome position: 99.42

GC content: 54.2

Gene sequence:

>714_bases
ATGAGTTCCGAAAATTTAAAAGAAATTCGCGGCGGAATCGGTGAGACTTTAACGGTCGGTTTGGGGCTGATTCCGCTGGG
TTTGGCCTTTGGGCTGTTGATGGTCCAGACAGGTTTCGCCTGGTGGTGGACGCCGATTTTCTCCTTCGTGATCTATGCCG
GTTCGATGGAATTTCTGGCAATCGGCATGGTCACCGCAGGTATCGGCCCGTTTTCGGCGGCGGTCGCTGGTTTCATGGTG
AATTTCCGCCACATTTTCTACGGTCTCACCTTCCCACGCCACCGCATCAAGTCCGGCGCCGGCCGCGCCTATTCCACCTA
CGCGCTTACCGACGAGTCCTACGCCATCGTGTCAGCCCGCCCACCTGGCGATATCAGTGGCACGCGGGTGCTTACCATTC
AAATTTTGTGCCAAGCTCTGTGGGTTATCCCAGGAATTATTGGTGCCTTGGTTGGTCAAGTGTTGCCGGATGATCTTAAA
GGCATGGATTTCGCCCTGACCGCGCTGTTTGTAGTGCTGGCGTGGGAGGCATTCAAAAATAACAAGGATTATTCGCTGCC
ATTATTCGCGGTGGTATTGGCTCTGGTTTCCGGTTTTGTGGCGCCCGAGCAGATGCTGGTTATCACTCTGACCACGTACT
TTGTGATCCTCCTTCTCCGCGTCCGCTTCCCCAACCTGGATAAGAAACTGGAGCTTAGGACTTCCCATGAGTGA

Upstream 100 bases:

>100_bases
CGCGCCGGGCCGCGTCGATATTTGGGGCGACGTGATGCGTCGACAAGCAATGCCTTTGCCGTTGTATTCCACGTTTCCGT
CGGACCCTTCAGATAATTAG

Downstream 100 bases:

>100_bases
GTTTGGTCTGCCAGAAGGTGTCACGCTGCTCAACGTCGCCGCTGTGTTGATCCCCATCGCGATCATCACCGTGATGCTGC
GCATCTTCCCCTTCGCCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MSSENLKEIRGGIGETLTVGLGLIPLGLAFGLLMVQTGFAWWWTPIFSFVIYAGSMEFLAIGMVTAGIGPFSAAVAGFMV
NFRHIFYGLTFPRHRIKSGAGRAYSTYALTDESYAIVSARPPGDISGTRVLTIQILCQALWVIPGIIGALVGQVLPDDLK
GMDFALTALFVVLAWEAFKNNKDYSLPLFAVVLALVSGFVAPEQMLVITLTTYFVILLLRVRFPNLDKKLELRTSHE

Sequences:

>Translated_237_residues
MSSENLKEIRGGIGETLTVGLGLIPLGLAFGLLMVQTGFAWWWTPIFSFVIYAGSMEFLAIGMVTAGIGPFSAAVAGFMV
NFRHIFYGLTFPRHRIKSGAGRAYSTYALTDESYAIVSARPPGDISGTRVLTIQILCQALWVIPGIIGALVGQVLPDDLK
GMDFALTALFVVLAWEAFKNNKDYSLPLFAVVLALVSGFVAPEQMLVITLTTYFVILLLRVRFPNLDKKLELRTSHE
>Mature_236_residues
SSENLKEIRGGIGETLTVGLGLIPLGLAFGLLMVQTGFAWWWTPIFSFVIYAGSMEFLAIGMVTAGIGPFSAAVAGFMVN
FRHIFYGLTFPRHRIKSGAGRAYSTYALTDESYAIVSARPPGDISGTRVLTIQILCQALWVIPGIIGALVGQVLPDDLKG
MDFALTALFVVLAWEAFKNNKDYSLPLFAVVLALVSGFVAPEQMLVITLTTYFVILLLRVRFPNLDKKLELRTSHE

Specific function: Unknown

COG id: COG1296

COG function: function code E; Predicted branched-chain amino acid permease (azaleucine resistance)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AzlC family [H]

Homologues:

Organism=Escherichia coli, GI1789038, Length=211, Percent_Identity=27.0142180094787, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004471
- InterPro:   IPR011606 [H]

Pfam domain/function: PF03591 AzlC [H]

EC number: NA

Molecular weight: Translated: 25898; Mature: 25767

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSENLKEIRGGIGETLTVGLGLIPLGLAFGLLMVQTGFAWWWTPIFSFVIYAGSMEFLA
CCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHH
IGMVTAGIGPFSAAVAGFMVNFRHIFYGLTFPRHRIKSGAGRAYSTYALTDESYAIVSAR
HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEEECCCCEEEEECC
PPGDISGTRVLTIQILCQALWVIPGIIGALVGQVLPDDLKGMDFALTALFVVLAWEAFKN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHCC
NKDYSLPLFAVVLALVSGFVAPEQMLVITLTTYFVILLLRVRFPNLDKKLELRTSHE
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCC
>Mature Secondary Structure 
SSENLKEIRGGIGETLTVGLGLIPLGLAFGLLMVQTGFAWWWTPIFSFVIYAGSMEFLA
CCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHH
IGMVTAGIGPFSAAVAGFMVNFRHIFYGLTFPRHRIKSGAGRAYSTYALTDESYAIVSAR
HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEEECCCCEEEEECC
PPGDISGTRVLTIQILCQALWVIPGIIGALVGQVLPDDLKGMDFALTALFVVLAWEAFKN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHCC
NKDYSLPLFAVVLALVSGFVAPEQMLVITLTTYFVILLLRVRFPNLDKKLELRTSHE
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]