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The map label for this gene is yrbE [H]

Identifier: 145297052

GI number: 145297052

Start: 3268155

End: 3269240

Strand: Direct

Name: yrbE [H]

Synonym: cgR_2948

Alternate gene names: 145297052

Gene position: 3268155-3269240 (Clockwise)

Preceding gene: 145297051

Following gene: 145297053

Centisome position: 98.61

GC content: 59.3

Gene sequence:

>1086_bases
ATGAAAAACATCACCATCGGAATGGTCGGCGTCGGCCGCATTGGCCGCATGCACGTCACCAACATGCTTGCCGTTGCTGA
AACTTTGAAGGAACGCGACCTCAACATTGAGATCGTGCTCGCAGACGCAATGCCCGGTTTTGCGGAGCAGGTGGGCGCGG
ACATGGGCGTGAAGGCGGCGGCAAGCGTCGATAAGCTTATTGAGGACGGGGTGGATGCCCTTTTCATTGCCACCAGCACC
GCTGGCCACGTCGATGTTTTGCGCAAGGGCATCGCGGCAAAGCTGCCGATGTTCTGCGAGAAGCCGATCGCGTCGGATGT
GCCTGAGTCGCTGAACATCATCCGCGAAATTGATGCGGCTGGCGCGACGGTTCAGGTCGGCCACCAGCGCCGTTTTGACC
TCGGTTACCAGGAAGCTAAACGACGCCTAGATGCAGGCGACCTCGGCTGGCTTCATTCGCTCAAGGCCGTATCGAGCGAT
GCGTTTCCGCCACCGGTGTCCTACTGCGCTACCTCTGGTGGGCTTTTCCGCGATGTGTCGCTGCACGATTTCGACATCAT
TCGCTGGCTGACCGGCCAGGACATTGTCGAGGTGTACGCCAAGGGCAGCAACAACGGCGACCCAGAAATCGGCGCAGTCG
GTGACATCGATACCGGAGCGGCCCTACTCACGCTTGCCGACGGCACCCTCGCCACCGCCATCGCCACTCGTTACAACGGT
GCAGGCCACGACGTTCGCCTCGATGTTATGGGCTCTAAAGATTCCGCGATCGTTGGCCTGGATGAAAAGTCCGCATTCGC
ATCTGCGGAGGAGGGCATCGATTTCCCAACCGGTGAATCGCACCCAACGTTTGCCGAGCGCTTCGCCGACGCATACAAGA
ATGAGTGCATTGCGTTCGTGGAGTTGATCCTGGGAGAGCGGGAAAACCCTTGCACCCCTGCAGACGCTGTGGCTGCGGCG
ATTGTTGCCGATGCAGCTCAGCTGTCGCTGGCCACTGGCGAGCCAGTGAAGATTCCTACTGTCCGGGAAATTCTTGATGG
TTCTGCGCAGCCAGTTGAAGTGCGCGCACTGGTTCCATCTGCTTAA

Upstream 100 bases:

>100_bases
GCGAATGCATGCCTTGAATCAGCTCAAACCGGCCGCACCGTCACCCTCAACCCTGCCAACGTTTAGTCAACGTCTAGTTA
ATGCCTAAGGAGAAAACCTC

Downstream 100 bases:

>100_bases
AACCTTGCTGCTTATCTAAAAGCCGACCCACAACAGTGGGTCGGCTTTTACTCACCCACCAAATCCCTAAAGTTGCAGTT
GAGACTTTGCGCCACGGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MKNITIGMVGVGRIGRMHVTNMLAVAETLKERDLNIEIVLADAMPGFAEQVGADMGVKAAASVDKLIEDGVDALFIATST
AGHVDVLRKGIAAKLPMFCEKPIASDVPESLNIIREIDAAGATVQVGHQRRFDLGYQEAKRRLDAGDLGWLHSLKAVSSD
AFPPPVSYCATSGGLFRDVSLHDFDIIRWLTGQDIVEVYAKGSNNGDPEIGAVGDIDTGAALLTLADGTLATAIATRYNG
AGHDVRLDVMGSKDSAIVGLDEKSAFASAEEGIDFPTGESHPTFAERFADAYKNECIAFVELILGERENPCTPADAVAAA
IVADAAQLSLATGEPVKIPTVREILDGSAQPVEVRALVPSA

Sequences:

>Translated_361_residues
MKNITIGMVGVGRIGRMHVTNMLAVAETLKERDLNIEIVLADAMPGFAEQVGADMGVKAAASVDKLIEDGVDALFIATST
AGHVDVLRKGIAAKLPMFCEKPIASDVPESLNIIREIDAAGATVQVGHQRRFDLGYQEAKRRLDAGDLGWLHSLKAVSSD
AFPPPVSYCATSGGLFRDVSLHDFDIIRWLTGQDIVEVYAKGSNNGDPEIGAVGDIDTGAALLTLADGTLATAIATRYNG
AGHDVRLDVMGSKDSAIVGLDEKSAFASAEEGIDFPTGESHPTFAERFADAYKNECIAFVELILGERENPCTPADAVAAA
IVADAAQLSLATGEPVKIPTVREILDGSAQPVEVRALVPSA
>Mature_361_residues
MKNITIGMVGVGRIGRMHVTNMLAVAETLKERDLNIEIVLADAMPGFAEQVGADMGVKAAASVDKLIEDGVDALFIATST
AGHVDVLRKGIAAKLPMFCEKPIASDVPESLNIIREIDAAGATVQVGHQRRFDLGYQEAKRRLDAGDLGWLHSLKAVSSD
AFPPPVSYCATSGGLFRDVSLHDFDIIRWLTGQDIVEVYAKGSNNGDPEIGAVGDIDTGAALLTLADGTLATAIATRYNG
AGHDVRLDVMGSKDSAIVGLDEKSAFASAEEGIDFPTGESHPTFAERFADAYKNECIAFVELILGERENPCTPADAVAAA
IVADAAQLSLATGEPVKIPTVREILDGSAQPVEVRALVPSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 37981; Mature: 37981

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: PS00141 ASP_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNITIGMVGVGRIGRMHVTNMLAVAETLKERDLNIEIVLADAMPGFAEQVGADMGVKAA
CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHCCCCCCHHH
ASVDKLIEDGVDALFIATSTAGHVDVLRKGIAAKLPMFCEKPIASDVPESLNIIREIDAA
HHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCHHHCCCCHHCCHHHHHHHHHHHCC
GATVQVGHQRRFDLGYQEAKRRLDAGDLGWLHSLKAVSSDAFPPPVSYCATSGGLFRDVS
CCEEEECCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHCCCCCEEECC
LHDFDIIRWLTGQDIVEVYAKGSNNGDPEIGAVGDIDTGAALLTLADGTLATAIATRYNG
CCCHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCC
AGHDVRLDVMGSKDSAIVGLDEKSAFASAEEGIDFPTGESHPTFAERFADAYKNECIAFV
CCCEEEEEEECCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
ELILGERENPCTPADAVAAAIVADAAQLSLATGEPVKIPTVREILDGSAQPVEVRALVPS
HHHHCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCEECCHHHHHHCCCCCCEEEEEECCC
A
C
>Mature Secondary Structure
MKNITIGMVGVGRIGRMHVTNMLAVAETLKERDLNIEIVLADAMPGFAEQVGADMGVKAA
CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHCCCCCCHHH
ASVDKLIEDGVDALFIATSTAGHVDVLRKGIAAKLPMFCEKPIASDVPESLNIIREIDAA
HHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHCCHHHCCCCHHCCHHHHHHHHHHHCC
GATVQVGHQRRFDLGYQEAKRRLDAGDLGWLHSLKAVSSDAFPPPVSYCATSGGLFRDVS
CCEEEECCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHCCCCCEEECC
LHDFDIIRWLTGQDIVEVYAKGSNNGDPEIGAVGDIDTGAALLTLADGTLATAIATRYNG
CCCHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCC
AGHDVRLDVMGSKDSAIVGLDEKSAFASAEEGIDFPTGESHPTFAERFADAYKNECIAFV
CCCEEEEEEECCCCCEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
ELILGERENPCTPADAVAAAIVADAAQLSLATGEPVKIPTVREILDGSAQPVEVRALVPS
HHHHCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCEECCHHHHHHCCCCCCEEEEEECCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9025289 [H]