| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is yfiY [H]
Identifier: 145296994
GI number: 145296994
Start: 3209025
End: 3209948
Strand: Direct
Name: yfiY [H]
Synonym: cgR_2893
Alternate gene names: 145296994
Gene position: 3209025-3209948 (Clockwise)
Preceding gene: 145296991
Following gene: 145296995
Centisome position: 96.83
GC content: 53.68
Gene sequence:
>924_bases ATGCCTTTTTTATGCTCCGTAATGCTGCTCAGTGCGTGCGGAACGCCAAACGATACTCCTGAAACAACTGACACTTCTGT GGAAACTGCCCTCGGCACCCTCAACGTCCCCTCCACAATTGACTCAGTAGTAATACTCGAAGGCCGCCGTGACCTAGACA TCGCCTTGGCGCTGGAACTCCCCGTGGTGGGCTACCCCTTTGAGGAAGCAGGCTCACTTGAACTCGAATCGCCACTGGCA ACTCAGCTAGAACAAGCCAAACTCAATGGCGCAGAAGAAATTTTCTCCGCAGATGACATCAGCCTCGAAGCAATTGCAGC GGCAGACCCCGACCTCATTATCTCCAGGCTCAGCGATGTTGAACCCATCCAAGAGCAACTAGAAACCATCGCACCAGTTC TTCCCATCGGTGAACAAGACACCAGCACATGGCAAGAAGACCTCCGGCTCGTCGCCCAAGCCACAGGCACCGAACAACGC GCTGAAGAACTAATTGCAGATTACGATTCCCGGATCAAAGCACTGTCCACTCAATATGCAGACATACTGGCCAACAACAC TTTCGCACCACTGAGCTTCAACGGAGAGAGCTTTGAAACCCGACCCAACCGGCTGCTCTCTGTCGTGCTCCGCGATCTTG GAGCAACCCCATCACAGGCTTTCGAAGCGGCAATCAACGGTGATGCAACCAAATACAGCCCAGAGCAAGTGCTCACTGGC TTTGGAGATGCAGACGGATTAATCATGCTGGTCAACAGCCCACAAACCTGGCAAGAACTTCAAGACAACCAGCTCTACCA GCAGCTCCCTGCGATAACAGAGGGACATTTCGTACGCTCAGACAAGCAAACCCATGAAGGTGGGCCGCTAACCGCGCTGC ACGCGCTCGATGTGATCGAGCAACTACTCCGAACCTTCCAGTAG
Upstream 100 bases:
>100_bases ACGGTCAGATGTTTGCCGTATCTGACGTGCTTTTTAATTGCACAATAGATCTAAGAATAAGGGTAGGGTACCTTAAGCTT TTGTGTATCAGAAACTTCTA
Downstream 100 bases:
>100_bases GTTCAGCAGAATGTGGCGCAGGCACACTGGCTACCAGCTGAGTTAGATTGATAACTTAGCTGGATATCCACCTTTTTAAT ATGGCTGAATTCTCCACAGC
Product: hypothetical protein
Products: ADP; phosphate; ferric enterobactin [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MPFLCSVMLLSACGTPNDTPETTDTSVETALGTLNVPSTIDSVVILEGRRDLDIALALELPVVGYPFEEAGSLELESPLA TQLEQAKLNGAEEIFSADDISLEAIAAADPDLIISRLSDVEPIQEQLETIAPVLPIGEQDTSTWQEDLRLVAQATGTEQR AEELIADYDSRIKALSTQYADILANNTFAPLSFNGESFETRPNRLLSVVLRDLGATPSQAFEAAINGDATKYSPEQVLTG FGDADGLIMLVNSPQTWQELQDNQLYQQLPAITEGHFVRSDKQTHEGGPLTALHALDVIEQLLRTFQ
Sequences:
>Translated_307_residues MPFLCSVMLLSACGTPNDTPETTDTSVETALGTLNVPSTIDSVVILEGRRDLDIALALELPVVGYPFEEAGSLELESPLA TQLEQAKLNGAEEIFSADDISLEAIAAADPDLIISRLSDVEPIQEQLETIAPVLPIGEQDTSTWQEDLRLVAQATGTEQR AEELIADYDSRIKALSTQYADILANNTFAPLSFNGESFETRPNRLLSVVLRDLGATPSQAFEAAINGDATKYSPEQVLTG FGDADGLIMLVNSPQTWQELQDNQLYQQLPAITEGHFVRSDKQTHEGGPLTALHALDVIEQLLRTFQ >Mature_306_residues PFLCSVMLLSACGTPNDTPETTDTSVETALGTLNVPSTIDSVVILEGRRDLDIALALELPVVGYPFEEAGSLELESPLAT QLEQAKLNGAEEIFSADDISLEAIAAADPDLIISRLSDVEPIQEQLETIAPVLPIGEQDTSTWQEDLRLVAQATGTEQRA EELIADYDSRIKALSTQYADILANNTFAPLSFNGESFETRPNRLLSVVLRDLGATPSQAFEAAINGDATKYSPEQVLTGF GDADGLIMLVNSPQTWQELQDNQLYQQLPAITEGHFVRSDKQTHEGGPLTALHALDVIEQLLRTFQ
Specific function: Part of the ABC transporter complex yfiYZ/yfhA/yusV involved in import of the iron-hydroxamate siderophores schizokinen, arthrobactin and corprogen. Binds the siderophores and delivers them to the surface of yfiZ/yfhA (Probable) [H]
COG id: COG0614
COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable). Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002491 [H]
Pfam domain/function: PF01497 Peripla_BP_2 [H]
EC number: NA
Molecular weight: Translated: 33311; Mature: 33180
Theoretical pI: Translated: 3.77; Mature: 3.77
Prosite motif: PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFLCSVMLLSACGTPNDTPETTDTSVETALGTLNVPSTIDSVVILEGRRDLDIALALEL CCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCHHCCEEEEECCCCCEEEEEEEC PVVGYPFEEAGSLELESPLATQLEQAKLNGAEEIFSADDISLEAIAAADPDLIISRLSDV CEECCCCCCCCCEEECCHHHHHHHHHHCCCHHHHHCCCCCCEEEECCCCHHHHHHHHCCH EPIQEQLETIAPVLPIGEQDTSTWQEDLRLVAQATGTEQRAEELIADYDSRIKALSTQYA HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH DILANNTFAPLSFNGESFETRPNRLLSVVLRDLGATPSQAFEAAINGDATKYSPEQVLTG HHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHC FGDADGLIMLVNSPQTWQELQDNQLYQQLPAITEGHFVRSDKQTHEGGPLTALHALDVIE CCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHH QLLRTFQ HHHHHCC >Mature Secondary Structure PFLCSVMLLSACGTPNDTPETTDTSVETALGTLNVPSTIDSVVILEGRRDLDIALALEL CHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCHHCCEEEEECCCCCEEEEEEEC PVVGYPFEEAGSLELESPLATQLEQAKLNGAEEIFSADDISLEAIAAADPDLIISRLSDV CEECCCCCCCCCEEECCHHHHHHHHHHCCCHHHHHCCCCCCEEEECCCCHHHHHHHHCCH EPIQEQLETIAPVLPIGEQDTSTWQEDLRLVAQATGTEQRAEELIADYDSRIKALSTQYA HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH DILANNTFAPLSFNGESFETRPNRLLSVVLRDLGATPSQAFEAAINGDATKYSPEQVLTG HHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHC FGDADGLIMLVNSPQTWQELQDNQLYQQLPAITEGHFVRSDKQTHEGGPLTALHALDVIE CCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHH QLLRTFQ HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; ferric enterobactin [Periplasm]; H2O [C]
Specific reaction: ATP + ferric enterobactin [Periplasm] + H2O = ADP + phosphate + ferric enterobactin [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8946165; 9384377 [H]