| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is 145296988
Identifier: 145296988
GI number: 145296988
Start: 3202453
End: 3203940
Strand: Reverse
Name: 145296988
Synonym: cgR_2887
Alternate gene names: NA
Gene position: 3203940-3202453 (Counterclockwise)
Preceding gene: 145296989
Following gene: 145296987
Centisome position: 96.67
GC content: 55.51
Gene sequence:
>1488_bases ATGAGCATCGGATTCGACCGCGACCTTTATATTAAGATGCAGTCGCGGCACATCAATGAGCGTCGCGAGCAGATCGGCGG CAAGCTGTATCTGGAAATGGGCGGCAAGCTTTTCGACGACATGCACGCTTCCCGTGTGCTGCCAGGTTTCACACCTGACA ACAAGATCGCCATGCTCACTGAGCTTAAAGATGAGCTGGAAATCCTCGTCGCAATCAATGCGAAGGATCTGGAGCGCAAG AAAACCCGCGCCGACCTCGACATTTCTTATGAGGAAGATGTTTTACGCCTCATTGATGTGTTCCGTGAGCTGGGCTTTTT GGCGGAGCACGTGGTGCTCACACAGTTGGAGGATGACAACTATCAGGCACTCACGTTCAAGCAGCGCCTGGAGCGCCTTG GCCTGAAGGTTGCTGTTCACCGCGTGATTCCGGGTTACCCAACTGATGCTCGCCGCATTGTTAGTGAGGATGGTTTCGGC ATCAATGAGTATGTGGAAACCACCCGCAATTTGGTTGTTGTGACCGCACCGGGCCCAGGTTCTGGAAAGCTCGCTACCTG CTTGAGCCAGATTTACGGCGATCACCAGCGCGGAATTAAGTCCGGCTACGCAAAGTTTGAAACTTTCCCCATTTGGAACC TGCCTCTTGAGCACCCAGTTAACTTGGCTTATGAGGCTGCCACTGCGGATCTCGATGACATCAACATCATCGATCCTTTC CACCTCGCCGCCTATGACACCAAAGCCACCAGCTACAACCGCGACGTGGAAGTCTTCCCGCTGCTGAAAACCATGCTGGA AATGCTGTCGGGCTCATCGCCGTACAAATCCCCCACCGACATGGGTGTCAACATGGTCGGAAGCGCAATTATCGACGACG CCGCGTGCCAGGAAGCCGCCCGCCAAGAAATTGTTCGGCGTTACTTCAAGGCGCTTGTCGACGAGCGCCGCGAGGAGCAG GACGATACCATTTCAGCGCGCATCGCCATTGTCATGAGCAAGGCCGGTTGCACCGTTGAAGACCGCCGCGTGGTTGCCCG CGCACTTGATGTTGAAGAATCCACCGGCGCGCCGGGTTGTGCCATTGAACTTAACGATGGTCGACTCGTCACCGGCAAGA CCTCCGAGCTTCTCGGATGCTCCGCAGCGATGGTGCTTAATGCATTGAAGGAACTCGCTGGCATTGATCGCAGCGTGGAC CTGCTCTCCCCCGAATCCATCGAGCCAATCCAATCGCTGAAGACCCAGCACCTGGGATCCCGCAACCCTCGCCTGCATAC CGATGAAGTGCTTATTGCTTTGTCGGTCTCTGCTGCGAACTCCGAAACTGCCCGCCGGGCTCTGGACGAGCTGAAAAATC TCCGCGGCTGCGATGTCCACACCACCACGATCCTCGGATCAGTTGATGAGGGCATTTTCCGTAACCTCGGAGTTTTGGTT ACTTCAGAGCCGAAGTACCAGCGTAAAGCTTTGTACCGGAAGCGTTAA
Upstream 100 bases:
>100_bases GGCGATAAGCCTCCTCCCTGGGGTCTTGTCCATTTCATAGGGTGTCCAGGTAATGTTTCAGGGGTTAGATTTCAGCTGAA GCAACTGGGGAGTTGGCGCT
Downstream 100 bases:
>100_bases GCCACTGGATTTTGTCGACCAGTTTCAGGCTGTTTAGCGGGCGAGTTCTTATAGAGATGTATAAGGTGAAGCTCATGAAA CTGAAGTGGCTTGCACCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 495; Mature: 494
Protein sequence:
>495_residues MSIGFDRDLYIKMQSRHINERREQIGGKLYLEMGGKLFDDMHASRVLPGFTPDNKIAMLTELKDELEILVAINAKDLERK KTRADLDISYEEDVLRLIDVFRELGFLAEHVVLTQLEDDNYQALTFKQRLERLGLKVAVHRVIPGYPTDARRIVSEDGFG INEYVETTRNLVVVTAPGPGSGKLATCLSQIYGDHQRGIKSGYAKFETFPIWNLPLEHPVNLAYEAATADLDDINIIDPF HLAAYDTKATSYNRDVEVFPLLKTMLEMLSGSSPYKSPTDMGVNMVGSAIIDDAACQEAARQEIVRRYFKALVDERREEQ DDTISARIAIVMSKAGCTVEDRRVVARALDVEESTGAPGCAIELNDGRLVTGKTSELLGCSAAMVLNALKELAGIDRSVD LLSPESIEPIQSLKTQHLGSRNPRLHTDEVLIALSVSAANSETARRALDELKNLRGCDVHTTTILGSVDEGIFRNLGVLV TSEPKYQRKALYRKR
Sequences:
>Translated_495_residues MSIGFDRDLYIKMQSRHINERREQIGGKLYLEMGGKLFDDMHASRVLPGFTPDNKIAMLTELKDELEILVAINAKDLERK KTRADLDISYEEDVLRLIDVFRELGFLAEHVVLTQLEDDNYQALTFKQRLERLGLKVAVHRVIPGYPTDARRIVSEDGFG INEYVETTRNLVVVTAPGPGSGKLATCLSQIYGDHQRGIKSGYAKFETFPIWNLPLEHPVNLAYEAATADLDDINIIDPF HLAAYDTKATSYNRDVEVFPLLKTMLEMLSGSSPYKSPTDMGVNMVGSAIIDDAACQEAARQEIVRRYFKALVDERREEQ DDTISARIAIVMSKAGCTVEDRRVVARALDVEESTGAPGCAIELNDGRLVTGKTSELLGCSAAMVLNALKELAGIDRSVD LLSPESIEPIQSLKTQHLGSRNPRLHTDEVLIALSVSAANSETARRALDELKNLRGCDVHTTTILGSVDEGIFRNLGVLV TSEPKYQRKALYRKR >Mature_494_residues SIGFDRDLYIKMQSRHINERREQIGGKLYLEMGGKLFDDMHASRVLPGFTPDNKIAMLTELKDELEILVAINAKDLERKK TRADLDISYEEDVLRLIDVFRELGFLAEHVVLTQLEDDNYQALTFKQRLERLGLKVAVHRVIPGYPTDARRIVSEDGFGI NEYVETTRNLVVVTAPGPGSGKLATCLSQIYGDHQRGIKSGYAKFETFPIWNLPLEHPVNLAYEAATADLDDINIIDPFH LAAYDTKATSYNRDVEVFPLLKTMLEMLSGSSPYKSPTDMGVNMVGSAIIDDAACQEAARQEIVRRYFKALVDERREEQD DTISARIAIVMSKAGCTVEDRRVVARALDVEESTGAPGCAIELNDGRLVTGKTSELLGCSAAMVLNALKELAGIDRSVDL LSPESIEPIQSLKTQHLGSRNPRLHTDEVLIALSVSAANSETARRALDELKNLRGCDVHTTTILGSVDEGIFRNLGVLVT SEPKYQRKALYRKR
Specific function: Unknown
COG id: COG4868
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0371 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2887_CORGB (A4QI41)
Other databases:
- EMBL: AP009044 - RefSeq: YP_001139809.1 - ProteinModelPortal: A4QI41 - SMR: A4QI41 - GeneID: 4992311 - GenomeReviews: AP009044_GR - KEGG: cgt:cgR_2887 - eggNOG: COG4868 - HOGENOM: HBG305009 - OMA: FDPVYQH - ProtClustDB: PRK13663 - HAMAP: MF_01567 - InterPro: IPR014999 - PIRSF: PIRSF033132
Pfam domain/function: PF08903 DUF1846
EC number: NA
Molecular weight: Translated: 55112; Mature: 54980
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIGFDRDLYIKMQSRHINERREQIGGKLYLEMGGKLFDDMHASRVLPGFTPDNKIAMLT CCCCCCCEEEEEEHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCEEHHH ELKDELEILVAINAKDLERKKTRADLDISYEEDVLRLIDVFRELGFLAEHVVLTQLEDDN HHHCCEEEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC YQALTFKQRLERLGLKVAVHRVIPGYPTDARRIVSEDGFGINEYVETTRNLVVVTAPGPG EEEHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHCCCEEEEECCCCC SGKLATCLSQIYGDHQRGIKSGYAKFETFPIWNLPLEHPVNLAYEAATADLDDINIIDPF CCHHHHHHHHHHCHHHHHHHHCCHHHEECEEECCCCCCCCCCEEHHHCCCCCCCCCCCCC HLAAYDTKATSYNRDVEVFPLLKTMLEMLSGSSPYKSPTDMGVNMVGSAIIDDAACQEAA HHEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHH RQEIVRRYFKALVDERREEQDDTISARIAIVMSKAGCTVEDRRVVARALDVEESTGAPGC HHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCE AIELNDGRLVTGKTSELLGCSAAMVLNALKELAGIDRSVDLLSPESIEPIQSLKTQHLGS EEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCC RNPRLHTDEVLIALSVSAANSETARRALDELKNLRGCDVHTTTILGSVDEGIFRNLGVLV CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCEEHHHHHCCHHHHHHHCCCEEE TSEPKYQRKALYRKR ECCCCHHHHHHHCCC >Mature Secondary Structure SIGFDRDLYIKMQSRHINERREQIGGKLYLEMGGKLFDDMHASRVLPGFTPDNKIAMLT CCCCCCEEEEEEHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCEEHHH ELKDELEILVAINAKDLERKKTRADLDISYEEDVLRLIDVFRELGFLAEHVVLTQLEDDN HHHCCEEEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCC YQALTFKQRLERLGLKVAVHRVIPGYPTDARRIVSEDGFGINEYVETTRNLVVVTAPGPG EEEHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHCCCEEEEECCCCC SGKLATCLSQIYGDHQRGIKSGYAKFETFPIWNLPLEHPVNLAYEAATADLDDINIIDPF CCHHHHHHHHHHCHHHHHHHHCCHHHEECEEECCCCCCCCCCEEHHHCCCCCCCCCCCCC HLAAYDTKATSYNRDVEVFPLLKTMLEMLSGSSPYKSPTDMGVNMVGSAIIDDAACQEAA HHEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHH RQEIVRRYFKALVDERREEQDDTISARIAIVMSKAGCTVEDRRVVARALDVEESTGAPGC HHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCE AIELNDGRLVTGKTSELLGCSAAMVLNALKELAGIDRSVDLLSPESIEPIQSLKTQHLGS EEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCC RNPRLHTDEVLIALSVSAANSETARRALDELKNLRGCDVHTTTILGSVDEGIFRNLGVLV CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCEEHHHHHCCHHHHHHHCCCEEE TSEPKYQRKALYRKR ECCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA