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The map label for this gene is ssb [H]

Identifier: 145296971

GI number: 145296971

Start: 3187250

End: 3187927

Strand: Reverse

Name: ssb [H]

Synonym: cgR_2870

Alternate gene names: 145296971

Gene position: 3187927-3187250 (Counterclockwise)

Preceding gene: 145296972

Following gene: 145296970

Centisome position: 96.19

GC content: 57.96

Gene sequence:

>678_bases
ATGGCAATCGGAGATACCAACATCACCGTCGTTGGCAACATTGTTGCTGACCCGGAACTCCGCTTCACCCCATCGGGTGC
AGCAGTGGCTAACTTCCGCATTGCATCAACTCCCCGCTCGTTCAACCGCCAAACCAACCAGTGGGAAGACGGCGAAGCCC
TCTTTCTCACCGTTAACGTTTGGCGTCAGGCGGCTGAAAACGTTGCAGAGTCCCTGTCCAAGGGTATGCGCGTTATCGTC
ACCGGTCGCCTCAAGCAGCGCTCCTATGAAACCCGTGAGGGCGAAAAGCGCAGCGTTTTTGAGGTCGAAGCGGATGAAGT
CGGACCATCACTGACATTTGCCAAGGCAGATGTCCAGCGCACACCGCGCGGTGGAAACTCTGGCGGAAACTACGGTGGCG
GCAACCAAGGTGGTGGCTTCGGTGGAAACCAGGGCAACCAGCAAGGTGGATTCAGCAACCAGAACTCTGGCGGCTTCGGT
GGAAACCAAGGCAACCAGCAGCAAAGCAACCAGGGCGGATTTGGTGGAAACCAAAACCAGTCCCAGGGTAACAACTTCAA
CCAAGGTGGATTTGGCGGAGGCAGCCCACAGGCAGCACCGGACAATGACCCTTGGAATTCTGCACCACCAGCTGGCTCCG
GCGGGTTCGGCGGCGCAGACGATGAGCCACCGTTCTAA

Upstream 100 bases:

>100_bases
CGATCGTGTTCTGAACCTGAATGATGGTGTCCTGCGCACCAAGGTTCTGCGACTCGACAAGTAAAGAACTTTAAGGCTCT
AGAGAGGTAGTTGAAGGATT

Downstream 100 bases:

>100_bases
AGCTTTTCTTTTCTAAAACATTCACAAACACTCAAAAACCACGAAAGGCAGGGATCATGAAGCTGATCCTCACCGCCGCC
GTTGAAAACCTTGGTGTCGC

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MAIGDTNITVVGNIVADPELRFTPSGAAVANFRIASTPRSFNRQTNQWEDGEALFLTVNVWRQAAENVAESLSKGMRVIV
TGRLKQRSYETREGEKRSVFEVEADEVGPSLTFAKADVQRTPRGGNSGGNYGGGNQGGGFGGNQGNQQGGFSNQNSGGFG
GNQGNQQQSNQGGFGGNQNQSQGNNFNQGGFGGGSPQAAPDNDPWNSAPPAGSGGFGGADDEPPF

Sequences:

>Translated_225_residues
MAIGDTNITVVGNIVADPELRFTPSGAAVANFRIASTPRSFNRQTNQWEDGEALFLTVNVWRQAAENVAESLSKGMRVIV
TGRLKQRSYETREGEKRSVFEVEADEVGPSLTFAKADVQRTPRGGNSGGNYGGGNQGGGFGGNQGNQQGGFSNQNSGGFG
GNQGNQQQSNQGGFGGNQNQSQGNNFNQGGFGGGSPQAAPDNDPWNSAPPAGSGGFGGADDEPPF
>Mature_224_residues
AIGDTNITVVGNIVADPELRFTPSGAAVANFRIASTPRSFNRQTNQWEDGEALFLTVNVWRQAAENVAESLSKGMRVIVT
GRLKQRSYETREGEKRSVFEVEADEVGPSLTFAKADVQRTPRGGNSGGNYGGGNQGGGFGGNQGNQQGGFSNQNSGGFGG
NQGNQQQSNQGGFGGNQNQSQGNNFNQGGFGGGSPQAAPDNDPWNSAPPAGSGGFGGADDEPPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 23335; Mature: 23204

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIGDTNITVVGNIVADPELRFTPSGAAVANFRIASTPRSFNRQTNQWEDGEALFLTVNV
CCCCCCCEEEEEEEEECCCEEECCCCCEEEEEEEECCCHHHCCCCCCCCCCCEEEEEHHH
WRQAAENVAESLSKGMRVIVTGRLKQRSYETREGEKRSVFEVEADEVGPSLTFAKADVQR
HHHHHHHHHHHHHCCCEEEEECCHHHHCCCCCCCCCCCEEEEEHHHCCCCEEEEHHHHHH
TPRGGNSGGNYGGGNQGGGFGGNQGNQQGGFSNQNSGGFGGNQGNQQQSNQGGFGGNQNQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SQGNNFNQGGFGGGSPQAAPDNDPWNSAPPAGSGGFGGADDEPPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AIGDTNITVVGNIVADPELRFTPSGAAVANFRIASTPRSFNRQTNQWEDGEALFLTVNV
CCCCCCEEEEEEEEECCCEEECCCCCEEEEEEEECCCHHHCCCCCCCCCCCEEEEEHHH
WRQAAENVAESLSKGMRVIVTGRLKQRSYETREGEKRSVFEVEADEVGPSLTFAKADVQR
HHHHHHHHHHHHHCCCEEEEECCHHHHCCCCCCCCCCCEEEEEHHHCCCCEEEEHHHHHH
TPRGGNSGGNYGGGNQGGGFGGNQGNQQGGFSNQNSGGFGGNQGNQQQSNQGGFGGNQNQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
SQGNNFNQGGFGGGSPQAAPDNDPWNSAPPAGSGGFGGADDEPPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12948626 [H]