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The map label for this gene is ydcJ [C]

Identifier: 145296925

GI number: 145296925

Start: 3137275

End: 3138639

Strand: Direct

Name: ydcJ [C]

Synonym: cgR_2825

Alternate gene names: 145296925

Gene position: 3137275-3138639 (Clockwise)

Preceding gene: 145296924

Following gene: 145296926

Centisome position: 94.66

GC content: 54.95

Gene sequence:

>1365_bases
ATGTACGGCATGGAAGTTCCTGCGTACAACACTCTTGTGGATGTATCGGAGCGGGTTAACCGCGATTTCCTGGAGAAGGA
AGTCGGGGATGCTGAAAGGCTTGGTTCGATTCAGCGTGTGACTGCAGAACGCCACGGCGCGATTCGTGTGGGTTCACCAA
AGGAGATGTCGCAGGTAGCTACCGTCTTTGAAGCCTTTGGTATGTACCCGGTGGGTTTTTATGATCTCCGCGACGCTTCT
GCTTCTTCGGTTCCTGTCGTTTCAACCGCGTTCCGTCCTGTTGACGCTGAAGAACTAGCGCTCAATCCTTTCCGAGTTTT
CACCTCCATGCTCGCGGCTGATGATCCACGGTTTTTCAACGCGGAACAGCAGCGCAAGCTCCAAGAATTCATCAATGCCC
GAATCCTGTTCCCGCAGGAGCTGCTCAGCCTTGCTGAAAAGGCTACTGAGCAGGAAGGACTCGATGGGGCAGAGGCTTCA
ACACTGCTCGATCTAGCCACTGCTTCTTTTGAACTTTCCAGTAAGCCGGTTGATCACGCGTGGTACCGCGAGCTTGAGTC
GGTTTCCGCTGTTGCGGCAGATATTGGCGGAGTTCCAAGCACTCACATCAATCACTTAACTCCGCGTGTGCTTGATATTG
AAGATCTTTATGCACGCATGGAGAGCCTGGGAATCGCCATGATTGATGAGGTCCAAGGCCCTCCATCGTGGCAAGGTCCC
GATGTTCTGCTTCGCCAGACGTCTTTCAGGGCGCTTTCGGAGGAACGCATCTTTAAGTTTGAGGATGGAAGCGTCGGCCC
TGGCGCGCTGCGGGTGCGTTTTGGCGAAGTCGAACAGCGTGGAATCGCGCTGACGCCTCGAGGTCGGGAGCTGTACGACC
GGATGGTGGTTGACGTCGATAAGCAATTGCAGGAAACCGGTGGCGTCCGCACCGACGTTGCGCGCCAGGTGTGGCAGGAC
AATTTGCCGGATACCGAAGCCGGCTTGCTGGCCGAAGGCCTTGCGTATTTTGAGTTTGATTTGGCGCCCGGGCAGGCGCC
CACGGTTCCGGCCGAAGTCAGCTTAAAAGCATTGCTTGACGACACGACCGTGCAGGCGAGCCCCATCGTCTACGAGGACT
TTTTGCCTCGGTCGGCAGCAGGAATTTTCCAATCGAATCTCACTGGCGAAGGCACGAAAGACGCTGCACAGAAAGGCACA
GAATATGACCTAGAAACACTGTCCAAGATCATCGGCCGAGACATCGCAGACCCATTCCACCTCTACCAAGCTCAGGTCGA
TGCGTCGATCGCGCGCCTAGCTGAAAAACTCAATACCACCATCATCAATGACACCTTTCTGAAGGAGAACTCCGATCATG
TCTAA

Upstream 100 bases:

>100_bases
CATTGGTGTCCGAAGTAAACATTATTTAAGGAGAACAGTTCTAGTGTCTTTCAAGAAAACATGGCAACTACGGGCAGAGT
TTGCTCGCAGGCTTTCAGAA

Downstream 100 bases:

>100_bases
CACCGCGCTTGCCACCAAGACTTCCCTTTACAACGATGTTTCCGCTGCTCTCCAAGCTATTGGTGTTGATCCTTCAACGC
TTGACGGTGAGATCAAGACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MYGMEVPAYNTLVDVSERVNRDFLEKEVGDAERLGSIQRVTAERHGAIRVGSPKEMSQVATVFEAFGMYPVGFYDLRDAS
ASSVPVVSTAFRPVDAEELALNPFRVFTSMLAADDPRFFNAEQQRKLQEFINARILFPQELLSLAEKATEQEGLDGAEAS
TLLDLATASFELSSKPVDHAWYRELESVSAVAADIGGVPSTHINHLTPRVLDIEDLYARMESLGIAMIDEVQGPPSWQGP
DVLLRQTSFRALSEERIFKFEDGSVGPGALRVRFGEVEQRGIALTPRGRELYDRMVVDVDKQLQETGGVRTDVARQVWQD
NLPDTEAGLLAEGLAYFEFDLAPGQAPTVPAEVSLKALLDDTTVQASPIVYEDFLPRSAAGIFQSNLTGEGTKDAAQKGT
EYDLETLSKIIGRDIADPFHLYQAQVDASIARLAEKLNTTIINDTFLKENSDHV

Sequences:

>Translated_454_residues
MYGMEVPAYNTLVDVSERVNRDFLEKEVGDAERLGSIQRVTAERHGAIRVGSPKEMSQVATVFEAFGMYPVGFYDLRDAS
ASSVPVVSTAFRPVDAEELALNPFRVFTSMLAADDPRFFNAEQQRKLQEFINARILFPQELLSLAEKATEQEGLDGAEAS
TLLDLATASFELSSKPVDHAWYRELESVSAVAADIGGVPSTHINHLTPRVLDIEDLYARMESLGIAMIDEVQGPPSWQGP
DVLLRQTSFRALSEERIFKFEDGSVGPGALRVRFGEVEQRGIALTPRGRELYDRMVVDVDKQLQETGGVRTDVARQVWQD
NLPDTEAGLLAEGLAYFEFDLAPGQAPTVPAEVSLKALLDDTTVQASPIVYEDFLPRSAAGIFQSNLTGEGTKDAAQKGT
EYDLETLSKIIGRDIADPFHLYQAQVDASIARLAEKLNTTIINDTFLKENSDHV
>Mature_454_residues
MYGMEVPAYNTLVDVSERVNRDFLEKEVGDAERLGSIQRVTAERHGAIRVGSPKEMSQVATVFEAFGMYPVGFYDLRDAS
ASSVPVVSTAFRPVDAEELALNPFRVFTSMLAADDPRFFNAEQQRKLQEFINARILFPQELLSLAEKATEQEGLDGAEAS
TLLDLATASFELSSKPVDHAWYRELESVSAVAADIGGVPSTHINHLTPRVLDIEDLYARMESLGIAMIDEVQGPPSWQGP
DVLLRQTSFRALSEERIFKFEDGSVGPGALRVRFGEVEQRGIALTPRGRELYDRMVVDVDKQLQETGGVRTDVARQVWQD
NLPDTEAGLLAEGLAYFEFDLAPGQAPTVPAEVSLKALLDDTTVQASPIVYEDFLPRSAAGIFQSNLTGEGTKDAAQKGT
EYDLETLSKIIGRDIADPFHLYQAQVDASIARLAEKLNTTIINDTFLKENSDHV

Specific function: Unknown

COG id: COG5383

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ydcJ [H]

Homologues:

Organism=Escherichia coli, GI1787692, Length=445, Percent_Identity=37.752808988764, Blast_Score=254, Evalue=1e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009770 [H]

Pfam domain/function: PF07063 DUF1338 [H]

EC number: NA

Molecular weight: Translated: 50022; Mature: 50022

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYGMEVPAYNTLVDVSERVNRDFLEKEVGDAERLGSIQRVTAERHGAIRVGSPKEMSQVA
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHCCEEEECCHHHHHHHH
TVFEAFGMYPVGFYDLRDASASSVPVVSTAFRPVDAEELALNPFRVFTSMLAADDPRFFN
HHHHHHCCCCCCEEECCCCCCCCCCCHHHCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCC
AEQQRKLQEFINARILFPQELLSLAEKATEQEGLDGAEASTLLDLATASFELSSKPVDHA
HHHHHHHHHHHCCEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHH
WYRELESVSAVAADIGGVPSTHINHLTPRVLDIEDLYARMESLGIAMIDEVQGPPSWQGP
HHHHHHHHHHHHHHHCCCCCCHHHHCCCCEECHHHHHHHHHHCCCHHHHHCCCCCCCCCC
DVLLRQTSFRALSEERIFKFEDGSVGPGALRVRFGEVEQRGIALTPRGRELYDRMVVDVD
HHHHHHHHHHHHHHHHCEEECCCCCCCCEEEEEECCCCCCCEEECCCCHHHHHHHHHHHH
KQLQETGGVRTDVARQVWQDNLPDTEAGLLAEGLAYFEFDLAPGQAPTVPAEVSLKALLD
HHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHC
DTTVQASPIVYEDFLPRSAAGIFQSNLTGEGTKDAAQKGTEYDLETLSKIIGRDIADPFH
CCCCCCCCCHHHHHCCHHHHHHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCHHH
LYQAQVDASIARLAEKLNTTIINDTFLKENSDHV
HHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC
>Mature Secondary Structure
MYGMEVPAYNTLVDVSERVNRDFLEKEVGDAERLGSIQRVTAERHGAIRVGSPKEMSQVA
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHCCEEEECCHHHHHHHH
TVFEAFGMYPVGFYDLRDASASSVPVVSTAFRPVDAEELALNPFRVFTSMLAADDPRFFN
HHHHHHCCCCCCEEECCCCCCCCCCCHHHCCCCCCHHHHHCCHHHHHHHHHHCCCCCCCC
AEQQRKLQEFINARILFPQELLSLAEKATEQEGLDGAEASTLLDLATASFELSSKPVDHA
HHHHHHHHHHHCCEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHH
WYRELESVSAVAADIGGVPSTHINHLTPRVLDIEDLYARMESLGIAMIDEVQGPPSWQGP
HHHHHHHHHHHHHHHCCCCCCHHHHCCCCEECHHHHHHHHHHCCCHHHHHCCCCCCCCCC
DVLLRQTSFRALSEERIFKFEDGSVGPGALRVRFGEVEQRGIALTPRGRELYDRMVVDVD
HHHHHHHHHHHHHHHHCEEECCCCCCCCEEEEEECCCCCCCEEECCCCHHHHHHHHHHHH
KQLQETGGVRTDVARQVWQDNLPDTEAGLLAEGLAYFEFDLAPGQAPTVPAEVSLKALLD
HHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHC
DTTVQASPIVYEDFLPRSAAGIFQSNLTGEGTKDAAQKGTEYDLETLSKIIGRDIADPFH
CCCCCCCCCHHHHHCCHHHHHHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCHHH
LYQAQVDASIARLAEKLNTTIINDTFLKENSDHV
HHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]