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The map label for this gene is glcC [H]

Identifier: 145296916

GI number: 145296916

Start: 3128528

End: 3129223

Strand: Direct

Name: glcC [H]

Synonym: cgR_2816

Alternate gene names: 145296916

Gene position: 3128528-3129223 (Clockwise)

Preceding gene: 145296915

Following gene: 145296917

Centisome position: 94.4

GC content: 59.2

Gene sequence:

>696_bases
ATGAGTGTGAAAGCACATGAATCTGTCATGGATTGGGTCACCGAGGAACTCCGCAGCGGTCGCCTAAAAATCGGTGATCA
TCTCCCCAGCGAACGGGCGCTCTCCGAAACCCTCGGAGTTTCCCGAAGCTCCCTGCGCGAGGCGCTTCGTGTGCTCGAAG
CCCTCGGCACCATTTCCACCGCCACCGGATCCGGACCGCGGTCTGGCACCATCATCACCGCTGCCCCTGGCCAGGCGCTT
TCCCTCTCCGTGACGCTGCAATTGGTCACCAACCAGGTCGGCCACCACGATATTTATGAAACCCGCCAACTCCTTGAAGG
CTGGGCTGCCCTGCATTCCAGCGCCGAACGCGGCGACTGGGACGTGGCAGAAGCGTTGCTGGAAAAGATGGATGACCCCT
CGCTACCGCTCGAGGATTTTTTGCGTTTCGACGCCGAATTCCACGTCGTTATCTCCAAAGGCGCGGAAAACCCTCTGATC
AGTACGCTCATGGAAGCCCTCCGCTTGTCCGTGGCAGATCACACCGTTGCCAGGGCTCTGGCGCTCCCAGATTGGCCGGC
AACCTCAGCTCGTCTGCAGAAAGAACACCGTGCAATCCTCGCAGCACTTCGCGCAGGTGAATCCACCATGGCAGCAACCC
TGATCAAAGACCACATCGAAGGCTATTACCAAGAAACCGCTGCTGCCGAGGCATAA

Upstream 100 bases:

>100_bases
AGACGGCGCGTTTAGCCCCAACGAACGCCGCGCCGGTGAATTAGACAGGCTGCTTGACAGCCTCCTAACGGCTGTCCGCG
ATTAAGGCTCTGAAATACTA

Downstream 100 bases:

>100_bases
ATGTCCCGCACATTGTGGGCAGTTTCCGACCTCCACGTCACCTTCGCCCAGAACCAAGACACCGTTGACGCCCTCATGCC
ACGAGACCCCGGCGATTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MSVKAHESVMDWVTEELRSGRLKIGDHLPSERALSETLGVSRSSLREALRVLEALGTISTATGSGPRSGTIITAAPGQAL
SLSVTLQLVTNQVGHHDIYETRQLLEGWAALHSSAERGDWDVAEALLEKMDDPSLPLEDFLRFDAEFHVVISKGAENPLI
STLMEALRLSVADHTVARALALPDWPATSARLQKEHRAILAALRAGESTMAATLIKDHIEGYYQETAAAEA

Sequences:

>Translated_231_residues
MSVKAHESVMDWVTEELRSGRLKIGDHLPSERALSETLGVSRSSLREALRVLEALGTISTATGSGPRSGTIITAAPGQAL
SLSVTLQLVTNQVGHHDIYETRQLLEGWAALHSSAERGDWDVAEALLEKMDDPSLPLEDFLRFDAEFHVVISKGAENPLI
STLMEALRLSVADHTVARALALPDWPATSARLQKEHRAILAALRAGESTMAATLIKDHIEGYYQETAAAEA
>Mature_230_residues
SVKAHESVMDWVTEELRSGRLKIGDHLPSERALSETLGVSRSSLREALRVLEALGTISTATGSGPRSGTIITAAPGQALS
LSVTLQLVTNQVGHHDIYETRQLLEGWAALHSSAERGDWDVAEALLEKMDDPSLPLEDFLRFDAEFHVVISKGAENPLIS
TLMEALRLSVADHTVARALALPDWPATSARLQKEHRAILAALRAGESTMAATLIKDHIEGYYQETAAAEA

Specific function: Activator for the glycolate oxidation locus [H]

COG id: COG2186

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789353, Length=221, Percent_Identity=28.0542986425339, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 25011; Mature: 24879

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVKAHESVMDWVTEELRSGRLKIGDHLPSERALSETLGVSRSSLREALRVLEALGTIST
CCCCHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
ATGSGPRSGTIITAAPGQALSLSVTLQLVTNQVGHHDIYETRQLLEGWAALHSSAERGDW
CCCCCCCCCEEEEECCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCH
DVAEALLEKMDDPSLPLEDFLRFDAEFHVVISKGAENPLISTLMEALRLSVADHTVARAL
HHHHHHHHHCCCCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
ALPDWPATSARLQKEHRAILAALRAGESTMAATLIKDHIEGYYQETAAAEA
HCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SVKAHESVMDWVTEELRSGRLKIGDHLPSERALSETLGVSRSSLREALRVLEALGTIST
CCCHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC
ATGSGPRSGTIITAAPGQALSLSVTLQLVTNQVGHHDIYETRQLLEGWAALHSSAERGDW
CCCCCCCCCEEEEECCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCH
DVAEALLEKMDDPSLPLEDFLRFDAEFHVVISKGAENPLISTLMEALRLSVADHTVARAL
HHHHHHHHHCCCCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
ALPDWPATSARLQKEHRAILAALRAGESTMAATLIKDHIEGYYQETAAAEA
HCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]