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The map label for this gene is ygbN [H]

Identifier: 145296906

GI number: 145296906

Start: 3115704

End: 3117095

Strand: Direct

Name: ygbN [H]

Synonym: cgR_2806

Alternate gene names: 145296906

Gene position: 3115704-3117095 (Clockwise)

Preceding gene: 145296903

Following gene: 145296907

Centisome position: 94.01

GC content: 56.18

Gene sequence:

>1392_bases
ATGGACACTTGGGAACAAACTCTTGGAACAGGGTCGTTGCTCGGCATCGCCGCCGGAGCAATCGCCCTGATCCTGGTTCT
CGTCATTGTTTTTAAACTGCACGCGTTCTTAACCCTCGTGCTCGTTTCAATCGCCACCGCACTAGTTGCCGGCATCCCCG
TCACTGAAGTTGTCGATACCCTCCTGAGTGGATTCGGCGGAACACTCGCATCGGTCGCGCTTCTGGTCGGACTGGGAGCA
ATGCTTGGCAGGCTGGTAGAAACCTCAGGTGGCGCCAAATCGCTTGCCGATGCCATGGTCCGCATCTTCGGCGAGAAGCG
CGCGCCATTCGCGCTGGGCGTCGCCTCACTGATCATGGGCTTCCCGATCTTCTTCGACGCTGGCCTCGTGGTCATGCTGC
CGGTTATTTTCGCAGTTGCGCGCCGCTTGAACGGTTCCGTTCTCACATTCGGCATCCCTGCCGCTGGCGCGTTTTCCGTT
ATGCACGTCTTCGTCCCACCGCACCCAGGCCCAATTGCGGCATCTGAATTCTTTGGTGCACAGGTTGGATATGTCCTGAT
CGCAGGCATTATCGTTGCACTGCCAACGTGGTACTTGACCGGCTACTTGCTGGGCAAATTCCTGGGCAGGAAGTTCCCAC
TGCCAGTTCCAGATCTACTAAGCGGTGGCGCACAAGAAGATGATCAGCCTCAGAATCCTGCGAGCGCTGTGTCAATTATT
GCCATTCTGCTTATTCCGATGCTGCTCATCTTCGGTAACACCGGCACCTCAATGGCAGTTTCCGCAGGTGTCCTTGATGC
AGAATCCACCGTGGTCAAGATCCTGGGATTCCTTGGTGAAACCCCAGTAGCCCTGCTCATCACCGTGCTGATCGCCCTAT
TCTTCCTGGGCAACCGTCGCGGCATTAGTGGTTCCGCACTAGAAAAGACCGTCGAGGGCGCGCTCGGACCAATCTGTTCC
GTCGTGTTAATCACCGGTGCTGGTGGCATGTTTGGTGGAGTTCTTCGCACCTCTGGCATTGGTGGAGCGCTCGCCGATTC
CATGTCTGATCTGGGGCTTCCTGTCATCGCGGGTTGCTTCATTGTGGCAGCCGTTCTGCGTGTTGCACAGGGTTCCGCAA
CTGTCGCACTGACCACCGCCGCAGCATTGATGGCACCCGCTGTTGCTGCAGCTGACTTCAATGAGTTCCAGCTCGCTGCG
ATCGTTATTTCCACTGCTGCTGGTTCCGTTATTGCCAGCCACGTGAACGACTCCGGCTTCTGGCTCGTTGGTCGACTTAT
GAATGCTGACGTTCCAACCACATTGAAGACCTGGACCGTGAACCAGACCTGTATTGCCATCGTTGGTTTCATCATGGCTT
ACGCAATGTTCGGACTTGCTTCATTGGCTTAA

Upstream 100 bases:

>100_bases
GACCTCGCACTTTTAACAAAAGTGTGGCTTAAATCTCAATTTCTGTGTAGTTTGATCATACTAATTCATTTTCAGTCGGA
TACTGCGAAGGATCTTCCCT

Downstream 100 bases:

>100_bases
CCCTTACCGAAAAAAGAGCCTGTTCCCTTTTCGGGGCAGGTTCTTTTTATTGCCATAACCTGCACAAAGAGAATCACTTA
ACAAGAAGTCCTTGACGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MDTWEQTLGTGSLLGIAAGAIALILVLVIVFKLHAFLTLVLVSIATALVAGIPVTEVVDTLLSGFGGTLASVALLVGLGA
MLGRLVETSGGAKSLADAMVRIFGEKRAPFALGVASLIMGFPIFFDAGLVVMLPVIFAVARRLNGSVLTFGIPAAGAFSV
MHVFVPPHPGPIAASEFFGAQVGYVLIAGIIVALPTWYLTGYLLGKFLGRKFPLPVPDLLSGGAQEDDQPQNPASAVSII
AILLIPMLLIFGNTGTSMAVSAGVLDAESTVVKILGFLGETPVALLITVLIALFFLGNRRGISGSALEKTVEGALGPICS
VVLITGAGGMFGGVLRTSGIGGALADSMSDLGLPVIAGCFIVAAVLRVAQGSATVALTTAAALMAPAVAAADFNEFQLAA
IVISTAAGSVIASHVNDSGFWLVGRLMNADVPTTLKTWTVNQTCIAIVGFIMAYAMFGLASLA

Sequences:

>Translated_463_residues
MDTWEQTLGTGSLLGIAAGAIALILVLVIVFKLHAFLTLVLVSIATALVAGIPVTEVVDTLLSGFGGTLASVALLVGLGA
MLGRLVETSGGAKSLADAMVRIFGEKRAPFALGVASLIMGFPIFFDAGLVVMLPVIFAVARRLNGSVLTFGIPAAGAFSV
MHVFVPPHPGPIAASEFFGAQVGYVLIAGIIVALPTWYLTGYLLGKFLGRKFPLPVPDLLSGGAQEDDQPQNPASAVSII
AILLIPMLLIFGNTGTSMAVSAGVLDAESTVVKILGFLGETPVALLITVLIALFFLGNRRGISGSALEKTVEGALGPICS
VVLITGAGGMFGGVLRTSGIGGALADSMSDLGLPVIAGCFIVAAVLRVAQGSATVALTTAAALMAPAVAAADFNEFQLAA
IVISTAAGSVIASHVNDSGFWLVGRLMNADVPTTLKTWTVNQTCIAIVGFIMAYAMFGLASLA
>Mature_463_residues
MDTWEQTLGTGSLLGIAAGAIALILVLVIVFKLHAFLTLVLVSIATALVAGIPVTEVVDTLLSGFGGTLASVALLVGLGA
MLGRLVETSGGAKSLADAMVRIFGEKRAPFALGVASLIMGFPIFFDAGLVVMLPVIFAVARRLNGSVLTFGIPAAGAFSV
MHVFVPPHPGPIAASEFFGAQVGYVLIAGIIVALPTWYLTGYLLGKFLGRKFPLPVPDLLSGGAQEDDQPQNPASAVSII
AILLIPMLLIFGNTGTSMAVSAGVLDAESTVVKILGFLGETPVALLITVLIALFFLGNRRGISGSALEKTVEGALGPICS
VVLITGAGGMFGGVLRTSGIGGALADSMSDLGLPVIAGCFIVAAVLRVAQGSATVALTTAAALMAPAVAAADFNEFQLAA
IVISTAAGSVIASHVNDSGFWLVGRLMNADVPTTLKTWTVNQTCIAIVGFIMAYAMFGLASLA

Specific function: Unknown

COG id: COG2610

COG function: function code GE; H+/gluconate symporter and related permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gntP permease family [H]

Homologues:

Organism=Escherichia coli, GI1789097, Length=459, Percent_Identity=37.6906318082789, Blast_Score=269, Evalue=4e-73,
Organism=Escherichia coli, GI1790716, Length=439, Percent_Identity=37.3576309794989, Blast_Score=251, Evalue=5e-68,
Organism=Escherichia coli, GI48994935, Length=436, Percent_Identity=36.4678899082569, Blast_Score=248, Evalue=6e-67,
Organism=Escherichia coli, GI48994939, Length=445, Percent_Identity=34.1573033707865, Blast_Score=247, Evalue=1e-66,
Organism=Escherichia coli, GI2367370, Length=426, Percent_Identity=34.9765258215962, Blast_Score=216, Evalue=2e-57,
Organism=Escherichia coli, GI1790776, Length=435, Percent_Identity=29.4252873563218, Blast_Score=195, Evalue=5e-51,
Organism=Escherichia coli, GI1788707, Length=421, Percent_Identity=31.353919239905, Blast_Score=192, Evalue=5e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003474 [H]

Pfam domain/function: PF02447 GntP_permease [H]

EC number: NA

Molecular weight: Translated: 47038; Mature: 47038

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTWEQTLGTGSLLGIAAGAIALILVLVIVFKLHAFLTLVLVSIATALVAGIPVTEVVDT
CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LLSGFGGTLASVALLVGLGAMLGRLVETSGGAKSLADAMVRIFGEKRAPFALGVASLIMG
HHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
FPIFFDAGLVVMLPVIFAVARRLNGSVLTFGIPAAGAFSVMHVFVPPHPGPIAASEFFGA
HHHHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHEEEEEECCCCCCCCHHHHHHH
QVGYVLIAGIIVALPTWYLTGYLLGKFLGRKFPLPVPDLLSGGAQEDDQPQNPASAVSII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHH
AILLIPMLLIFGNTGTSMAVSAGVLDAESTVVKILGFLGETPVALLITVLIALFFLGNRR
HHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
GISGSALEKTVEGALGPICSVVLITGAGGMFGGVLRTSGIGGALADSMSDLGLPVIAGCF
CCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHH
IVAAVLRVAQGSATVALTTAAALMAPAVAAADFNEFQLAAIVISTAAGSVIASHVNDSGF
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCH
WLVGRLMNADVPTTLKTWTVNQTCIAIVGFIMAYAMFGLASLA
HHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]