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The map label for this gene is glpQ1 [H]

Identifier: 145296905

GI number: 145296905

Start: 3114542

End: 3115366

Strand: Reverse

Name: glpQ1 [H]

Synonym: cgR_2805

Alternate gene names: 145296905

Gene position: 3115366-3114542 (Counterclockwise)

Preceding gene: 145296911

Following gene: 145296904

Centisome position: 94.0

GC content: 51.39

Gene sequence:

>825_bases
ATGCGAAATTGGGAGGATACTAGAGTCGACAGCAGGTATATAAAGGCCAGGAGAGATGGGTTCATGAAAGTCATCGCGCA
CCGAGGTTTATCGTCTCGCTTTCCCGAATTAACAGAGTCTGCGTTTCGGGCGGCTCTAGAGTTGCCGATTCATGGAATTG
AAACCGATGTCCGTCTGACCAAGTGCGGTGAAGTGGTCAATATCCATGATCCCATCGTGGATCGCGTGTCGAATGGTCGC
GGTCGGGTGTCGCGTTTGGATTTAGAATCCTTGCTGAGCTTGAACTTTGGCACCAAAGAAGCCCCAGAAAAAGTTCTTAC
CTTAAATAATCTGCTGGATATTCTTGAAGACTATCCAGATAAGCACCTCTACATTGAGACCAAGCATCCGATGCGTTATG
CCATCATGCTGGAAGAAGAAGTCACCAAGATCCTGAAATACCGTGGGCTGATGGAAGATCCACGCATTCACATTATTTCC
TTTGCACTTCCAGCGATTTCCCGCATGGAACGTCTCGCACCTGCAATTGATCGCATTCATTTGCGCAGGTCATGGGAGCG
TTGGGGAAATCCGCGTGATCTCCGCTGCGGAGCACCCACCGGTTTGGGATTGTCTGTGGAGCGGGCGAAGATGGACCCAA
GGATGATTGGGGCGAAAGGGTTACCCACCTATCTTTTCACCGTCGATAAGCAAAAAGACATGCTGTGGGCGCGCGACCAT
GGCGTCGACATGCTCGCCACCAATTATCCGGACCGCGCGGCGGAGCTTTTGAACGCACATCCCAAGCCCGCCATGTACGC
TAATGCGCATGGCAAAGAAGACTAA

Upstream 100 bases:

>100_bases
CAATGTAATTAATGGACTACACCGTCCGACCGTGAATGCTGATCGGTAATCTGAGTCACAAAATAAGCGGAGTGTAGTTA
TTCCTCCCCGAGCTGCGGAT

Downstream 100 bases:

>100_bases
GAAGAATGAACAGCTGCCGGAGGGCATGAGCCGTCGTCAGGCAAAACTTGCAGCCCGCGCGGCTGAACGTGCAGCACTTG
AGCGTGAACCTCGCCCATTC

Product: hypothetical protein

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase 1 [H]

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MRNWEDTRVDSRYIKARRDGFMKVIAHRGLSSRFPELTESAFRAALELPIHGIETDVRLTKCGEVVNIHDPIVDRVSNGR
GRVSRLDLESLLSLNFGTKEAPEKVLTLNNLLDILEDYPDKHLYIETKHPMRYAIMLEEEVTKILKYRGLMEDPRIHIIS
FALPAISRMERLAPAIDRIHLRRSWERWGNPRDLRCGAPTGLGLSVERAKMDPRMIGAKGLPTYLFTVDKQKDMLWARDH
GVDMLATNYPDRAAELLNAHPKPAMYANAHGKED

Sequences:

>Translated_274_residues
MRNWEDTRVDSRYIKARRDGFMKVIAHRGLSSRFPELTESAFRAALELPIHGIETDVRLTKCGEVVNIHDPIVDRVSNGR
GRVSRLDLESLLSLNFGTKEAPEKVLTLNNLLDILEDYPDKHLYIETKHPMRYAIMLEEEVTKILKYRGLMEDPRIHIIS
FALPAISRMERLAPAIDRIHLRRSWERWGNPRDLRCGAPTGLGLSVERAKMDPRMIGAKGLPTYLFTVDKQKDMLWARDH
GVDMLATNYPDRAAELLNAHPKPAMYANAHGKED
>Mature_274_residues
MRNWEDTRVDSRYIKARRDGFMKVIAHRGLSSRFPELTESAFRAALELPIHGIETDVRLTKCGEVVNIHDPIVDRVSNGR
GRVSRLDLESLLSLNFGTKEAPEKVLTLNNLLDILEDYPDKHLYIETKHPMRYAIMLEEEVTKILKYRGLMEDPRIHIIS
FALPAISRMERLAPAIDRIHLRRSWERWGNPRDLRCGAPTGLGLSVERAKMDPRMIGAKGLPTYLFTVDKQKDMLWARDH
GVDMLATNYPDRAAELLNAHPKPAMYANAHGKED

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GDPD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 31431; Mature: 31431

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNWEDTRVDSRYIKARRDGFMKVIAHRGLSSRFPELTESAFRAALELPIHGIETDVRLT
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEE
KCGEVVNIHDPIVDRVSNGRGRVSRLDLESLLSLNFGTKEAPEKVLTLNNLLDILEDYPD
CCCCEEECCHHHHHHHCCCCCCEEHHCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC
KHLYIETKHPMRYAIMLEEEVTKILKYRGLMEDPRIHIISFALPAISRMERLAPAIDRIH
CEEEEEECCCEEEEEEEHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHH
LRRSWERWGNPRDLRCGAPTGLGLSVERAKMDPRMIGAKGLPTYLFTVDKQKDMLWARDH
HHHHHHHCCCCCCEECCCCCCCCCCHHHHHCCCHHCCCCCCCEEEEEECCCCCEEEECCC
GVDMLATNYPDRAAELLNAHPKPAMYANAHGKED
CCEEEECCCCHHHHHHHCCCCCCCEEECCCCCCC
>Mature Secondary Structure
MRNWEDTRVDSRYIKARRDGFMKVIAHRGLSSRFPELTESAFRAALELPIHGIETDVRLT
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEE
KCGEVVNIHDPIVDRVSNGRGRVSRLDLESLLSLNFGTKEAPEKVLTLNNLLDILEDYPD
CCCCEEECCHHHHHHHCCCCCCEEHHCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC
KHLYIETKHPMRYAIMLEEEVTKILKYRGLMEDPRIHIISFALPAISRMERLAPAIDRIH
CEEEEEECCCEEEEEEEHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHH
LRRSWERWGNPRDLRCGAPTGLGLSVERAKMDPRMIGAKGLPTYLFTVDKQKDMLWARDH
HHHHHHHCCCCCCEECCCCCCCCCCHHHHHCCCHHCCCCCCCEEEEEECCCCCEEEECCC
GVDMLATNYPDRAAELLNAHPKPAMYANAHGKED
CCEEEECCCCHHHHHHHCCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]