| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is 145296888
Identifier: 145296888
GI number: 145296888
Start: 3094457
End: 3095188
Strand: Direct
Name: 145296888
Synonym: cgR_2788
Alternate gene names: NA
Gene position: 3094457-3095188 (Clockwise)
Preceding gene: 145296887
Following gene: 145296889
Centisome position: 93.37
GC content: 53.55
Gene sequence:
>732_bases ATGAGTGATTCAGTAATGTCACCGCGTCGAATAAAGGCGGAAATACTTATCGTTTTAGCCATCACCTTTGGCATGAGCGG TCTGCGATCAATCCTGCGCCTCATCGACGATCTCCTCGCACCGGTTGCGCTCAACGACCAGCAAGTTGCACTGAATGCCT CAATGGCAAACTCCGCATGGCTGGATCTCGCCTTGCAATTGTGTTCCGCCGGTGTGCTGTTTTCCTGGGGAGCGCTAGCG ATCTATCTGCTTGGCGAACGATTCCGCTGGATCAAACCCAAAGATTGGGCATGGGGTGCAGGCCTTGCAGCGCTCATCGG CATTCCCGGGCTGATCTTCTATGCGAGTGCCGTTCATCTGGGTCTTTCCAAACAGGTCGTGCCCACCACTTTAGAAACCT GGTGGGAAATCCCAGTGCTGCTTATATGGTCAGCCGCCAACGCATTTGGTGAAGAGATCGTGGTGGTCATGTGGTTCTTC ACCAGACTGCGCCAACTGAAGTGGAGCGTGCCAGCAGTCATTGTGGCATCTTCAGTTTTGCGCGGTTCCTATCACCTCTA CCAAGGAGTGTCTGCTGGTTTTGGCAACATCATCATGGGTGTGGTGTTCGCATACTTCTATCACCGCACGGGCAAAATCT GGCCACTGGTGATCGCTCACTTCTTGATTGATGCGGTGGCTTTCGTGGGGTATTCCGCCATCGGTGGGAACTTGAGCTGG TTGGGTTTGTAG
Upstream 100 bases:
>100_bases TCAGCATCCCGGTTAATGGTGTGGGCATTCATCTTGGCGGAGTGCTCGTGGGAAACGAAGACATCCTTGGGTTGGCAGCA TTTGTGGAAAGAGCTGTGGC
Downstream 100 bases:
>100_bases CTATCAAGCTGATTTGAGTCAGCCCGTGGACGGCCTGAGGTCTACGTATCCGAGAGAGTAGACCACCAGCGCTTAGTTGA TTGAGTTGTGGAGACACACA
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein; CAAX Amino Terminal Protease Family; CAAX Amino Terminal Protease Family Protein; CAAX Amino Protease Family Protein; Protease; CAAX Amino Terminal Protease; CAAX Amino Protease
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MSDSVMSPRRIKAEILIVLAITFGMSGLRSILRLIDDLLAPVALNDQQVALNASMANSAWLDLALQLCSAGVLFSWGALA IYLLGERFRWIKPKDWAWGAGLAALIGIPGLIFYASAVHLGLSKQVVPTTLETWWEIPVLLIWSAANAFGEEIVVVMWFF TRLRQLKWSVPAVIVASSVLRGSYHLYQGVSAGFGNIIMGVVFAYFYHRTGKIWPLVIAHFLIDAVAFVGYSAIGGNLSW LGL
Sequences:
>Translated_243_residues MSDSVMSPRRIKAEILIVLAITFGMSGLRSILRLIDDLLAPVALNDQQVALNASMANSAWLDLALQLCSAGVLFSWGALA IYLLGERFRWIKPKDWAWGAGLAALIGIPGLIFYASAVHLGLSKQVVPTTLETWWEIPVLLIWSAANAFGEEIVVVMWFF TRLRQLKWSVPAVIVASSVLRGSYHLYQGVSAGFGNIIMGVVFAYFYHRTGKIWPLVIAHFLIDAVAFVGYSAIGGNLSW LGL >Mature_242_residues SDSVMSPRRIKAEILIVLAITFGMSGLRSILRLIDDLLAPVALNDQQVALNASMANSAWLDLALQLCSAGVLFSWGALAI YLLGERFRWIKPKDWAWGAGLAALIGIPGLIFYASAVHLGLSKQVVPTTLETWWEIPVLLIWSAANAFGEEIVVVMWFFT RLRQLKWSVPAVIVASSVLRGSYHLYQGVSAGFGNIIMGVVFAYFYHRTGKIWPLVIAHFLIDAVAFVGYSAIGGNLSWL GL
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26667; Mature: 26536
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSVMSPRRIKAEILIVLAITFGMSGLRSILRLIDDLLAPVALNDQQVALNASMANSAW CCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHH LDLALQLCSAGVLFSWGALAIYLLGERFRWIKPKDWAWGAGLAALIGIPGLIFYASAVHL HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GLSKQVVPTTLETWWEIPVLLIWSAANAFGEEIVVVMWFFTRLRQLKWSVPAVIVASSVL CCCCCHHHHHHHHHHCCHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH RGSYHLYQGVSAGFGNIIMGVVFAYFYHRTGKIWPLVIAHFLIDAVAFVGYSAIGGNLSW HCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEE LGL ECC >Mature Secondary Structure SDSVMSPRRIKAEILIVLAITFGMSGLRSILRLIDDLLAPVALNDQQVALNASMANSAW CCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHH LDLALQLCSAGVLFSWGALAIYLLGERFRWIKPKDWAWGAGLAALIGIPGLIFYASAVHL HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GLSKQVVPTTLETWWEIPVLLIWSAANAFGEEIVVVMWFFTRLRQLKWSVPAVIVASSVL CCCCCHHHHHHHHHHCCHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH RGSYHLYQGVSAGFGNIIMGVVFAYFYHRTGKIWPLVIAHFLIDAVAFVGYSAIGGNLSW HCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEE LGL ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA