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The map label for this gene is yafV [C]

Identifier: 145296779

GI number: 145296779

Start: 2970345

End: 2971145

Strand: Reverse

Name: yafV [C]

Synonym: cgR_2683

Alternate gene names: 145296779

Gene position: 2971145-2970345 (Counterclockwise)

Preceding gene: 145296781

Following gene: 145296773

Centisome position: 89.65

GC content: 53.31

Gene sequence:

>801_bases
ATGCGTATTGCCTTGCTTCAGATCTCGACGAATTCCGATAAGATGGACAACTTCGCCCTGCTGCGTGATGCTGCTGAAAA
AGCTGCGGAACAGGGGGCTCGGGTGTTGGTGTTTCCGGAGGCGACTTCGCAAAGCTTTGGTACGGGAAGGCTTGATACTC
AGGCGGAGGAGCTCGATGGCGAATTCTCCACGGCGGTGAAAGAATTGGCCGATGAGCTGGGGGTTGTCATCGTTGCGGGC
ATGTTCACCCCTGCTGACACCGTGCAGCGCGGTGAAAAAACGATCTCGCGCGTCAACAACACCGTGCTGATTAGTGGCGC
TGGATTGCATCAGGGATACAACAAAATTCACACATATGACGCGTTCGGTTATAGGGAATCCGACACTGTGAAACCGGGCG
ATGAGCTGGTTGTATTCGAGGTCGACGATATTAAATTTGGTGTGGCGACATGCTACGATATTCGATTCCCAGAACAGTTC
AAAGACCTCGCCCGCAACGATGCTCAAGTAATTTTGGTACCAACCTCATGGCAGGACGGCCCTGGGAAATTGGAGCAATG
GCAACTGTTGCCTCGTGCGCGGGCGTTGGATTCCACCTCATGGATCGTTGCTTGTGGGCAAGCCCGTCTCCCAGAAGAAC
TGCGAGACAAACGAAACGGGCCGACTGGGATCGGTCATTCCATGGTGGCAAATCCCCACGGCCAGGTGATTGTTAGTGCA
GGTTATGAGCCTGAAATGCTGATCGTAGATATTGACGTGAGCGACTTGTCCAAAATCCGGGAGGCTTTGCCTGTTCTTTA
G

Upstream 100 bases:

>100_bases
AGGTACATGCTGCTGATTCAAGTGGTTTTTGCGATGCTGGGCAAGAAGTGATCACGCGAACCTGTGTATAACTTGCCTCA
AAGCGCCTAGGCTGTGGATT

Downstream 100 bases:

>100_bases
GCGCAGGATCCCCAGGCCATCCCCTCAAAACCAGCTTAAAAAACTAGAACCCCAGCACTTCGATCTGTCCGGCGGGGGTT
CCTCGTCGAATCATCGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MRIALLQISTNSDKMDNFALLRDAAEKAAEQGARVLVFPEATSQSFGTGRLDTQAEELDGEFSTAVKELADELGVVIVAG
MFTPADTVQRGEKTISRVNNTVLISGAGLHQGYNKIHTYDAFGYRESDTVKPGDELVVFEVDDIKFGVATCYDIRFPEQF
KDLARNDAQVILVPTSWQDGPGKLEQWQLLPRARALDSTSWIVACGQARLPEELRDKRNGPTGIGHSMVANPHGQVIVSA
GYEPEMLIVDIDVSDLSKIREALPVL

Sequences:

>Translated_266_residues
MRIALLQISTNSDKMDNFALLRDAAEKAAEQGARVLVFPEATSQSFGTGRLDTQAEELDGEFSTAVKELADELGVVIVAG
MFTPADTVQRGEKTISRVNNTVLISGAGLHQGYNKIHTYDAFGYRESDTVKPGDELVVFEVDDIKFGVATCYDIRFPEQF
KDLARNDAQVILVPTSWQDGPGKLEQWQLLPRARALDSTSWIVACGQARLPEELRDKRNGPTGIGHSMVANPHGQVIVSA
GYEPEMLIVDIDVSDLSKIREALPVL
>Mature_266_residues
MRIALLQISTNSDKMDNFALLRDAAEKAAEQGARVLVFPEATSQSFGTGRLDTQAEELDGEFSTAVKELADELGVVIVAG
MFTPADTVQRGEKTISRVNNTVLISGAGLHQGYNKIHTYDAFGYRESDTVKPGDELVVFEVDDIKFGVATCYDIRFPEQF
KDLARNDAQVILVPTSWQDGPGKLEQWQLLPRARALDSTSWIVACGQARLPEELRDKRNGPTGIGHSMVANPHGQVIVSA
GYEPEMLIVDIDVSDLSKIREALPVL

Specific function: Unknown

COG id: COG0388

COG function: function code R; Predicted amidohydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CN hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI9910460, Length=275, Percent_Identity=29.8181818181818, Blast_Score=137, Evalue=9e-33,
Organism=Homo sapiens, GI297632348, Length=277, Percent_Identity=29.9638989169675, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI297632350, Length=277, Percent_Identity=29.9638989169675, Blast_Score=102, Evalue=3e-22,
Organism=Homo sapiens, GI5031947, Length=277, Percent_Identity=29.9638989169675, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17556280, Length=274, Percent_Identity=27.007299270073, Blast_Score=93, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6323383, Length=278, Percent_Identity=28.0575539568345, Blast_Score=117, Evalue=1e-27,
Organism=Saccharomyces cerevisiae, GI6322335, Length=295, Percent_Identity=28.135593220339, Blast_Score=94, Evalue=2e-20,
Organism=Drosophila melanogaster, GI21355835, Length=274, Percent_Identity=31.3868613138686, Blast_Score=119, Evalue=2e-27,
Organism=Drosophila melanogaster, GI17933642, Length=276, Percent_Identity=30.7971014492754, Blast_Score=94, Evalue=7e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003010
- InterPro:   IPR001110 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: 3.5.-.- [C]

Molecular weight: Translated: 29133; Mature: 29133

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS50263 CN_HYDROLASE ; PS01227 UPF0012

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIALLQISTNSDKMDNFALLRDAAEKAAEQGARVLVFPEATSQSFGTGRLDTQAEELDG
CEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHCC
EFSTAVKELADELGVVIVAGMFTPADTVQRGEKTISRVNNTVLISGAGLHQGYNKIHTYD
HHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHEEEE
AFGYRESDTVKPGDELVVFEVDDIKFGVATCYDIRFPEQFKDLARNDAQVILVPTSWQDG
CCCCCCCCCCCCCCCEEEEEECCCEECEEEEEECCCCHHHHHHHCCCCEEEEEECCCCCC
PGKLEQWQLLPRARALDSTSWIVACGQARLPEELRDKRNGPTGIGHSMVANPHGQVIVSA
CCCCHHHHHCHHHHHCCCCCEEEEECCCCCCHHHHHCCCCCCCCCCCCEECCCCCEEEEC
GYEPEMLIVDIDVSDLSKIREALPVL
CCCCCEEEEEECHHHHHHHHHHHCCC
>Mature Secondary Structure
MRIALLQISTNSDKMDNFALLRDAAEKAAEQGARVLVFPEATSQSFGTGRLDTQAEELDG
CEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHCC
EFSTAVKELADELGVVIVAGMFTPADTVQRGEKTISRVNNTVLISGAGLHQGYNKIHTYD
HHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHEEEE
AFGYRESDTVKPGDELVVFEVDDIKFGVATCYDIRFPEQFKDLARNDAQVILVPTSWQDG
CCCCCCCCCCCCCCCEEEEEECCCEECEEEEEECCCCHHHHHHHCCCCEEEEEECCCCCC
PGKLEQWQLLPRARALDSTSWIVACGQARLPEELRDKRNGPTGIGHSMVANPHGQVIVSA
CCCCHHHHHCHHHHHCCCCCEEEEECCCCCCHHHHHCCCCCCCCCCCCEECCCCCEEEEC
GYEPEMLIVDIDVSDLSKIREALPVL
CCCCCEEEEEECHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]